RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, humanhuman

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-208ENST00000588071 CDCA7Q9BWT1 371 aaPredicted RBP18.63■□□□□ 0.57
CCDC130-208ENST00000588071 HNRNPUQ00839 825 aaKnown RBP eCLIP18.62■□□□□ 0.57
CCDC130-208ENST00000588071 BARGINQ6ZT62 677 aa18.62■□□□□ 0.57
CCDC130-208ENST00000588071 GAS2L2Q8NHY3 880 aa18.62■□□□□ 0.57
CCDC130-208ENST00000588071 SPG7Q9UQ90 795 aa18.62■□□□□ 0.57
CCDC130-208ENST00000588071 SALL2Q9Y467 1007 aaPredicted RBP18.62■□□□□ 0.57
CCDC130-208ENST00000588071 ATRNO75882 1429 aa18.62■□□□□ 0.57
CCDC130-208ENST00000588071 PARP4Q9UKK3 1724 aaKnown RBP18.62■□□□□ 0.57
CCDC130-208ENST00000588071 TMPOP42166 694 aaKnown RBP18.61■□□□□ 0.57
CCDC130-208ENST00000588071 FAM98CQ17RN3 349 aaKnown RBP18.61■□□□□ 0.57
CCDC130-208ENST00000588071 MTHFSDQ2M296 383 aaKnown RBP18.61■□□□□ 0.57
CCDC130-208ENST00000588071 RRP7AQ9Y3A4 280 aaKnown RBP18.61■□□□□ 0.57
CCDC130-208ENST00000588071 MEGF6O75095 1541 aa18.6■□□□□ 0.57
CCDC130-208ENST00000588071 RIPK4P57078 832 aa18.6■□□□□ 0.57
CCDC130-208ENST00000588071 NFE2L2Q16236 605 aa18.6■□□□□ 0.57
CCDC130-208ENST00000588071 ZCRB1Q8TBF4 217 aaKnown RBP18.6■□□□□ 0.57
CCDC130-208ENST00000588071 DLG5Q8TDM6 1919 aa18.6■□□□□ 0.57
CCDC130-208ENST00000588071 WNK3Q9BYP7 1800 aa18.6■□□□□ 0.57
CCDC130-208ENST00000588071 A0A0G2JS52 829 aa18.59■□□□□ 0.57
CCDC130-208ENST00000588071 EXOC5O00471 708 aa18.59■□□□□ 0.57
CCDC130-208ENST00000588071 MYT1Q01538 1121 aa18.59■□□□□ 0.57
CCDC130-208ENST00000588071 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.59■□□□□ 0.57
CCDC130-208ENST00000588071 C1orf141Q5JVX7 400 aa18.58■□□□□ 0.56
CCDC130-208ENST00000588071 ZNF530Q6P9A1 599 aaPredicted RBP18.58■□□□□ 0.56
CCDC130-208ENST00000588071 OVOS2A0A0G2JMS6 1433 aa18.57■□□□□ 0.56
CCDC130-208ENST00000588071 NGEFQ8N5V2 710 aa18.57■□□□□ 0.56
CCDC130-208ENST00000588071 RBM6P78332 1123 aaKnown RBP18.56■□□□□ 0.56
CCDC130-208ENST00000588071 DDB1Q16531 1140 aa18.56■□□□□ 0.56
CCDC130-208ENST00000588071 DDX54Q8TDD1 881 aaKnown RBP18.56■□□□□ 0.56
CCDC130-208ENST00000588071 DISP2A7MBM2 1401 aa18.56■□□□□ 0.56
CCDC130-208ENST00000588071 PLEKHG2Q9H7P9 1386 aa18.55■□□□□ 0.56
CCDC130-208ENST00000588071 GLI3P10071 1580 aa18.55■□□□□ 0.56
CCDC130-208ENST00000588071 PKD1L3Q7Z443 1732 aa18.55■□□□□ 0.56
CCDC130-208ENST00000588071 GNAT3A8MTJ3 354 aa18.55■□□□□ 0.56
CCDC130-208ENST00000588071 RXRBP28702 533 aa18.55■□□□□ 0.56
CCDC130-208ENST00000588071 LMOD3Q0VAK6 560 aa18.55■□□□□ 0.56
CCDC130-208ENST00000588071 AKAP4Q5JQC9 854 aa18.55■□□□□ 0.56
CCDC130-208ENST00000588071 IFNL2Q8IZJ0 200 aa18.55■□□□□ 0.56
CCDC130-208ENST00000588071 RTF1Q92541 710 aaKnown RBP18.55■□□□□ 0.56
CCDC130-208ENST00000588071 RGS17Q9UGC6 210 aaPredicted RBP18.55■□□□□ 0.56
CCDC130-208ENST00000588071 PCDH11XQ9BZA7 1347 aa18.54■□□□□ 0.56
CCDC130-208ENST00000588071 PCDH11YQ9BZA8 1340 aa18.54■□□□□ 0.56
CCDC130-208ENST00000588071 KAT6BQ8WYB5 2073 aa18.54■□□□□ 0.56
CCDC130-208ENST00000588071 PDE3BQ13370 1112 aa18.53■□□□□ 0.56
CCDC130-208ENST00000588071 NCBP3Q53F19 620 aaKnown RBP18.53■□□□□ 0.56
CCDC130-208ENST00000588071 HTATSF1O43719 755 aaKnown RBP18.52■□□□□ 0.56
CCDC130-208ENST00000588071 ONECUT3O60422 494 aaPredicted RBP18.52■□□□□ 0.56
CCDC130-208ENST00000588071 HSP90AB1P08238 724 aaKnown RBP18.52■□□□□ 0.56
CCDC130-208ENST00000588071 PHKG2P15735 406 aa18.52■□□□□ 0.56
CCDC130-208ENST00000588071 SEPT12Q8IYM1 358 aa18.52■□□□□ 0.56
CCDC130-208ENST00000588071 VIRMAQ69YN4 1812 aaKnown RBP18.51■□□□□ 0.55
CCDC130-208ENST00000588071 CYP27B1O15528 508 aa18.51■□□□□ 0.55
CCDC130-208ENST00000588071 CCDC27Q2M243 656 aa18.51■□□□□ 0.55
CCDC130-208ENST00000588071 POTEAQ6S8J7 498 aa18.51■□□□□ 0.55
CCDC130-208ENST00000588071 TRIM35Q9UPQ4 493 aa18.51■□□□□ 0.55
CCDC130-208ENST00000588071 MAP3K5Q99683 1374 aa18.51■□□□□ 0.55
CCDC130-208ENST00000588071 SHANK3Q9BYB0 1731 aa18.5■□□□□ 0.55
CCDC130-208ENST00000588071 MPRIPQ6WCQ1 1025 aa18.5■□□□□ 0.55
CCDC130-208ENST00000588071 WWC1Q8IX03 1113 aa18.5■□□□□ 0.55
CCDC130-208ENST00000588071 DCTN1Q14203 1278 aa18.49■□□□□ 0.55
CCDC130-208ENST00000588071 MCM10Q7L590 875 aa18.49■□□□□ 0.55
CCDC130-208ENST00000588071 LRRC37A3O60309 1634 aa18.49■□□□□ 0.55
CCDC130-208ENST00000588071 TNS2Q63HR2 1409 aa18.49■□□□□ 0.55
CCDC130-208ENST00000588071 ZBED9Q6R2W3 1325 aa18.49■□□□□ 0.55
CCDC130-208ENST00000588071 THSD7AQ9UPZ6 1657 aa18.48■□□□□ 0.55
CCDC130-208ENST00000588071 RNMTO43148 476 aaKnown RBP18.47■□□□□ 0.55
CCDC130-208ENST00000588071 CALD1Q05682 793 aaKnown RBP18.47■□□□□ 0.55
CCDC130-208ENST00000588071 IL17REQ8NFR9 667 aa18.47■□□□□ 0.55
CCDC130-208ENST00000588071 DCAF5Q96JK2 942 aa18.47■□□□□ 0.55
CCDC130-208ENST00000588071 LGR6Q9HBX8 967 aa18.47■□□□□ 0.55
CCDC130-208ENST00000588071 SCN11AQ9UI33 1791 aa18.46■□□□□ 0.55
CCDC130-208ENST00000588071 NKX1-1Q15270 411 aaPredicted RBP18.46■□□□□ 0.55
CCDC130-208ENST00000588071 WDR63Q8IWG1 891 aa18.46■□□□□ 0.55
CCDC130-208ENST00000588071 MARCH10Q8NA82 808 aaPredicted RBP18.46■□□□□ 0.55
CCDC130-208ENST00000588071 THUMPD2Q9BTF0 503 aaKnown RBP18.46■□□□□ 0.55
CCDC130-208ENST00000588071 BRWD3Q6RI45 1802 aa18.45■□□□□ 0.54
CCDC130-208ENST00000588071 GOLGA2Q08379 1002 aa18.44■□□□□ 0.54
CCDC130-208ENST00000588071 TEFQ10587 303 aa18.44■□□□□ 0.54
CCDC130-208ENST00000588071 LAS1LQ9Y4W2 734 aaKnown RBP18.44■□□□□ 0.54
CCDC130-208ENST00000588071 KRT27Q7Z3Y8 459 aa18.43■□□□□ 0.54
CCDC130-208ENST00000588071 ZNF521Q96K83 1311 aa18.43■□□□□ 0.54
CCDC130-208ENST00000588071 CABP4P57796 275 aa18.42■□□□□ 0.54
CCDC130-208ENST00000588071 ERVV-2B6SEH9 535 aa18.41■□□□□ 0.54
CCDC130-208ENST00000588071 TAF7Q15545 349 aaPredicted RBP18.41■□□□□ 0.54
CCDC130-208ENST00000588071 CEMIPQ8WUJ3 1361 aa18.41■□□□□ 0.54
CCDC130-208ENST00000588071 KDM6AO15550 1401 aaPredicted RBP18.4■□□□□ 0.54
CCDC130-208ENST00000588071 GNAI1P63096 354 aa18.4■□□□□ 0.54
CCDC130-208ENST00000588071 NFATC2IPQ8NCF5 419 aa18.4■□□□□ 0.54
CCDC130-208ENST00000588071 IL16Q14005 1332 aa18.4■□□□□ 0.54
CCDC130-208ENST00000588071 E9PSI1 815 aa18.39■□□□□ 0.53
CCDC130-208ENST00000588071 FAM182BQ5T319 152 aa18.39■□□□□ 0.53
CCDC130-208ENST00000588071 SYTL4Q96C24 671 aaPredicted RBP18.39■□□□□ 0.53
CCDC130-208ENST00000588071 CDCA7LQ96GN5 454 aa18.39■□□□□ 0.53
CCDC130-208ENST00000588071 SLC52A2Q9HAB3 445 aa18.39■□□□□ 0.53
CCDC130-208ENST00000588071 IFT57Q9NWB7 429 aa18.39■□□□□ 0.53
CCDC130-208ENST00000588071 ITGB4P16144 1822 aa18.39■□□□□ 0.53
CCDC130-208ENST00000588071 ADAMTS7Q9UKP4 1686 aa18.38■□□□□ 0.53
CCDC130-208ENST00000588071 BTBD11A6QL63 1104 aa18.38■□□□□ 0.53
CCDC130-208ENST00000588071 ACSBG1Q96GR2 724 aa18.38■□□□□ 0.53
CCDC130-208ENST00000588071 CFAP44Q96MT7 982 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms