RNA–Protein interactions for RNA: ENST00000587958.1

GRN-210, Transcript of granulin precursor, humanhuman

TSL 2

Gene GRN, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRN-210ENST00000587958 CC2D1BQ5T0F9 858 aaKnown RBP20.53■□□□□ 0.88
GRN-210ENST00000587958 PROM2Q8N271 834 aa20.53■□□□□ 0.88
GRN-210ENST00000587958 EYA1Q99502 592 aa20.53■□□□□ 0.88
GRN-210ENST00000587958 BCL11BQ9C0K0 894 aaPredicted RBP20.53■□□□□ 0.88
GRN-210ENST00000587958 SMG6Q86US8 1419 aaKnown RBP20.53■□□□□ 0.88
GRN-210ENST00000587958 EIF4A2Q14240 407 aaKnown RBP20.52■□□□□ 0.88
GRN-210ENST00000587958 KIF24Q5T7B8 1368 aa20.51■□□□□ 0.87
GRN-210ENST00000587958 ZCRB1Q8TBF4 217 aaKnown RBP20.51■□□□□ 0.87
GRN-210ENST00000587958 BCL9O00512 1426 aa20.51■□□□□ 0.87
GRN-210ENST00000587958 RAPGEF4Q8WZA2 1011 aa20.48■□□□□ 0.87
GRN-210ENST00000587958 NSD2O96028 1365 aa20.47■□□□□ 0.87
GRN-210ENST00000587958 TATP17735 454 aaPredicted RBP20.47■□□□□ 0.87
GRN-210ENST00000587958 RGPD3A6NKT7 1758 aaPredicted RBP20.46■□□□□ 0.87
GRN-210ENST00000587958 RGPD4Q7Z3J3 1758 aa20.46■□□□□ 0.87
GRN-210ENST00000587958 PRIM1P49642 420 aaKnown RBP20.46■□□□□ 0.87
GRN-210ENST00000587958 ANO8Q9HCE9 1232 aaPredicted RBP20.46■□□□□ 0.87
GRN-210ENST00000587958 PKD1L3Q7Z443 1732 aa20.46■□□□□ 0.87
GRN-210ENST00000587958 TOGARAM1Q9Y4F4 1720 aa20.46■□□□□ 0.87
GRN-210ENST00000587958 NCAPD2Q15021 1401 aa20.45■□□□□ 0.86
GRN-210ENST00000587958 PLSCR1O15162 318 aa20.45■□□□□ 0.86
GRN-210ENST00000587958 CYP27B1O15528 508 aa20.45■□□□□ 0.86
GRN-210ENST00000587958 KCNQ4P56696 695 aa20.45■□□□□ 0.86
GRN-210ENST00000587958 SYTL4Q96C24 671 aaPredicted RBP20.45■□□□□ 0.86
GRN-210ENST00000587958 ITGB4P16144 1822 aa20.44■□□□□ 0.86
GRN-210ENST00000587958 SRCAPQ6ZRS2 3230 aa20.44■□□□□ 0.86
GRN-210ENST00000587958 TXNRD1Q16881 649 aa20.43■□□□□ 0.86
GRN-210ENST00000587958 AEBP1Q8IUX7 1158 aa20.43■□□□□ 0.86
GRN-210ENST00000587958 PDGFDQ9GZP0 370 aaPredicted RBP20.43■□□□□ 0.86
GRN-210ENST00000587958 MTHFSP49914 203 aa20.42■□□□□ 0.86
GRN-210ENST00000587958 PARD3Q8TEW0 1356 aa20.42■□□□□ 0.86
GRN-210ENST00000587958 IGSF1Q8N6C5 1336 aa20.4■□□□□ 0.86
GRN-210ENST00000587958 LRRC4BQ9NT99 713 aa20.4■□□□□ 0.86
GRN-210ENST00000587958 IL13P35225 146 aa20.38■□□□□ 0.85
GRN-210ENST00000587958 PCDH11XQ9BZA7 1347 aa20.37■□□□□ 0.85
GRN-210ENST00000587958 PCDH11YQ9BZA8 1340 aa20.37■□□□□ 0.85
GRN-210ENST00000587958 LY75O60449 1722 aa20.36■□□□□ 0.85
GRN-210ENST00000587958 NBPF14Q5TI25 921 aa20.36■□□□□ 0.85
GRN-210ENST00000587958 SULT6B1Q6IMI4 303 aa20.35■□□□□ 0.85
GRN-210ENST00000587958 MPRIPQ6WCQ1 1025 aa20.35■□□□□ 0.85
GRN-210ENST00000587958 HMOX1P09601 288 aa20.34■□□□□ 0.85
GRN-210ENST00000587958 PAPPAQ13219 1627 aa20.34■□□□□ 0.85
GRN-210ENST00000587958 TUBGCP6Q96RT7 1819 aa20.33■□□□□ 0.85
GRN-210ENST00000587958 ZNF827Q17R98 1081 aa20.33■□□□□ 0.85
GRN-210ENST00000587958 SPG7Q9UQ90 795 aa20.33■□□□□ 0.85
GRN-210ENST00000587958 CASZ1Q86V15 1759 aa20.33■□□□□ 0.84
GRN-210ENST00000587958 PHKG2P15735 406 aa20.32■□□□□ 0.84
GRN-210ENST00000587958 NPC1L1Q9UHC9 1359 aa20.32■□□□□ 0.84
GRN-210ENST00000587958 LRP5O75197 1615 aa20.31■□□□□ 0.84
GRN-210ENST00000587958 COL3A1P02461 1466 aaPredicted RBP20.31■□□□□ 0.84
GRN-210ENST00000587958 VIRMAQ69YN4 1812 aaKnown RBP20.3■□□□□ 0.84
GRN-210ENST00000587958 NKX1-1Q15270 411 aaPredicted RBP20.3■□□□□ 0.84
GRN-210ENST00000587958 PIGBQ92521 554 aa20.3■□□□□ 0.84
GRN-210ENST00000587958 SLC15A2Q16348 729 aa20.29■□□□□ 0.84
GRN-210ENST00000587958 TAF1LQ8IZX4 1826 aa20.28■□□□□ 0.84
GRN-210ENST00000587958 STK32BQ9NY57 414 aa20.28■□□□□ 0.84
GRN-210ENST00000587958 DIAPH1O60610 1272 aaKnown RBP20.27■□□□□ 0.84
GRN-210ENST00000587958 ZBTB7AO95365 584 aa20.27■□□□□ 0.84
GRN-210ENST00000587958 ZNF530Q6P9A1 599 aaPredicted RBP20.27■□□□□ 0.84
GRN-210ENST00000587958 IFNL2Q8IZJ0 200 aa20.27■□□□□ 0.84
GRN-210ENST00000587958 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.27■□□□□ 0.84
GRN-210ENST00000587958 KDRP35968 1356 aa20.26■□□□□ 0.83
GRN-210ENST00000587958 PPP2R1AP30153 589 aa20.26■□□□□ 0.83
GRN-210ENST00000587958 DDX10Q13206 875 aaKnown RBP20.26■□□□□ 0.83
GRN-210ENST00000587958 SMIM5Q71RC9 77 aa20.26■□□□□ 0.83
GRN-210ENST00000587958 ASAP1Q9ULH1 1129 aa20.26■□□□□ 0.83
GRN-210ENST00000587958 KDM6AO15550 1401 aaPredicted RBP20.26■□□□□ 0.83
GRN-210ENST00000587958 PLEKHO1Q53GL0 409 aaPredicted RBP20.25■□□□□ 0.83
GRN-210ENST00000587958 CCNL1Q9UK58 526 aaPredicted RBP20.25■□□□□ 0.83
GRN-210ENST00000587958 ATF5Q9Y2D1 282 aaPredicted RBP20.25■□□□□ 0.83
GRN-210ENST00000587958 C5P01031 1676 aa20.24■□□□□ 0.83
GRN-210ENST00000587958 U2SURPO15042 1029 aaKnown RBP20.24■□□□□ 0.83
GRN-210ENST00000587958 AKT1S1Q96B36 256 aa20.24■□□□□ 0.83
GRN-210ENST00000587958 PALLDQ8WX93 1383 aa20.23■□□□□ 0.83
GRN-210ENST00000587958 SCN11AQ9UI33 1791 aa20.23■□□□□ 0.83
GRN-210ENST00000587958 SLC27A3Q5K4L6 730 aa20.21■□□□□ 0.83
GRN-210ENST00000587958 LGR6Q9HBX8 967 aa20.21■□□□□ 0.83
GRN-210ENST00000587958 ATG3Q9NT62 314 aa20.21■□□□□ 0.83
GRN-210ENST00000587958 TMOD3Q9NYL9 352 aa20.21■□□□□ 0.83
GRN-210ENST00000587958 MTHFSDQ2M296 383 aaKnown RBP20.2■□□□□ 0.82
GRN-210ENST00000587958 AMIGO3Q86WK7 504 aa20.2■□□□□ 0.82
GRN-210ENST00000587958 AMOTQ4VCS5 1084 aa20.19■□□□□ 0.82
GRN-210ENST00000587958 PNPLA7Q6ZV29 1317 aa20.19■□□□□ 0.82
GRN-210ENST00000587958 QSER1Q2KHR3 1735 aa20.19■□□□□ 0.82
GRN-210ENST00000587958 SPON1Q9HCB6 807 aa20.18■□□□□ 0.82
GRN-210ENST00000587958 ITPK1Q13572 414 aa20.17■□□□□ 0.82
GRN-210ENST00000587958 C1orf141Q5JVX7 400 aa20.17■□□□□ 0.82
GRN-210ENST00000587958 DCAF5Q96JK2 942 aa20.17■□□□□ 0.82
GRN-210ENST00000587958 SLC4A9Q96Q91 983 aa20.17■□□□□ 0.82
GRN-210ENST00000587958 C4BP0C0L5 1744 aa20.16■□□□□ 0.82
GRN-210ENST00000587958 PTGER2P43116 358 aa20.16■□□□□ 0.82
GRN-210ENST00000587958 NFATC2IPQ8NCF5 419 aa20.16■□□□□ 0.82
GRN-210ENST00000587958 PHACTR3Q96KR7 559 aa20.16■□□□□ 0.82
GRN-210ENST00000587958 TFCP2L1Q9NZI6 479 aa20.16■□□□□ 0.82
GRN-210ENST00000587958 CABP4P57796 275 aa20.15■□□□□ 0.82
GRN-210ENST00000587958 LINC00116Q8NCU8 138 aa20.15■□□□□ 0.82
GRN-210ENST00000587958 UBR3Q6ZT12 1888 aa20.14■□□□□ 0.81
GRN-210ENST00000587958 LOC102724428A0A0B4J2F2 783 aa20.14■□□□□ 0.81
GRN-210ENST00000587958 ERVV-2B6SEH9 535 aa20.14■□□□□ 0.81
GRN-210ENST00000587958 SIK1P57059 783 aa20.14■□□□□ 0.81
GRN-210ENST00000587958 COL23A1Q86Y22 540 aaPredicted RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 102.4 ms