RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 ARXQ96QS3 562 aa19.78■□□□□ 0.76
ERCC1-205ENST00000587888 AKT1S1Q96B36 256 aa19.77■□□□□ 0.76
ERCC1-205ENST00000587888 FAM208AQ9UK61 1670 aaKnown RBP19.77■□□□□ 0.76
ERCC1-205ENST00000587888 CDCA8Q53HL2 280 aa19.75■□□□□ 0.75
ERCC1-205ENST00000587888 TFCP2L1Q9NZI6 479 aa19.75■□□□□ 0.75
ERCC1-205ENST00000587888 PAPPAQ13219 1627 aa19.75■□□□□ 0.75
ERCC1-205ENST00000587888 HSP90AB2PQ58FF8 381 aa19.74■□□□□ 0.75
ERCC1-205ENST00000587888 RAPGEF4Q8WZA2 1011 aa19.74■□□□□ 0.75
ERCC1-205ENST00000587888 MEGF6O75095 1541 aa19.73■□□□□ 0.75
ERCC1-205ENST00000587888 RTL1A6NKG5 1358 aa19.72■□□□□ 0.75
ERCC1-205ENST00000587888 TATP17735 454 aaPredicted RBP19.72■□□□□ 0.75
ERCC1-205ENST00000587888 KLHL34Q8N239 644 aa19.72■□□□□ 0.75
ERCC1-205ENST00000587888 SLC16A10Q8TF71 515 aa19.71■□□□□ 0.75
ERCC1-205ENST00000587888 CARD14Q9BXL6 1004 aa19.71■□□□□ 0.75
ERCC1-205ENST00000587888 CCNL1Q9UK58 526 aaPredicted RBP19.71■□□□□ 0.75
ERCC1-205ENST00000587888 PNPLA7Q6ZV29 1317 aa19.71■□□□□ 0.75
ERCC1-205ENST00000587888 DOT1LQ8TEK3 1739 aa19.71■□□□□ 0.75
ERCC1-205ENST00000587888 SMG6Q86US8 1419 aaKnown RBP19.7■□□□□ 0.74
ERCC1-205ENST00000587888 NSD2O96028 1365 aa19.7■□□□□ 0.74
ERCC1-205ENST00000587888 PPM1GO15355 546 aaPredicted RBP19.69■□□□□ 0.74
ERCC1-205ENST00000587888 MSH5O43196 834 aa19.69■□□□□ 0.74
ERCC1-205ENST00000587888 POLD1P28340 1107 aa19.69■□□□□ 0.74
ERCC1-205ENST00000587888 CGNL1Q0VF96 1302 aa19.69■□□□□ 0.74
ERCC1-205ENST00000587888 INSRP06213 1382 aa19.69■□□□□ 0.74
ERCC1-205ENST00000587888 SHANK3Q9BYB0 1731 aa19.68■□□□□ 0.74
ERCC1-205ENST00000587888 GPR162Q16538 588 aa19.67■□□□□ 0.74
ERCC1-205ENST00000587888 EMILIN1Q9Y6C2 1016 aa19.67■□□□□ 0.74
ERCC1-205ENST00000587888 PCGF6Q9BYE7 350 aa19.66■□□□□ 0.74
ERCC1-205ENST00000587888 FLT4P35916 1363 aa19.66■□□□□ 0.74
ERCC1-205ENST00000587888 KIF20BQ96Q89 1820 aa19.65■□□□□ 0.74
ERCC1-205ENST00000587888 MPRIPQ6WCQ1 1025 aa19.65■□□□□ 0.74
ERCC1-205ENST00000587888 PELP1Q8IZL8 1130 aaKnown RBP19.65■□□□□ 0.74
ERCC1-205ENST00000587888 ZNF784Q8NCA9 323 aaPredicted RBP19.65■□□□□ 0.74
ERCC1-205ENST00000587888 POLR3GLQ9BT43 218 aa19.65■□□□□ 0.74
ERCC1-205ENST00000587888 NSD3Q9BZ95 1437 aa19.65■□□□□ 0.74
ERCC1-205ENST00000587888 PCDH11XQ9BZA7 1347 aa19.64■□□□□ 0.73
ERCC1-205ENST00000587888 PCDH11YQ9BZA8 1340 aa19.64■□□□□ 0.73
ERCC1-205ENST00000587888 LY75O60449 1722 aa19.64■□□□□ 0.73
ERCC1-205ENST00000587888 MAP3K5Q99683 1374 aa19.63■□□□□ 0.73
ERCC1-205ENST00000587888 COL23A1Q86Y22 540 aaPredicted RBP19.63■□□□□ 0.73
ERCC1-205ENST00000587888 QSER1Q2KHR3 1735 aa19.62■□□□□ 0.73
ERCC1-205ENST00000587888 CYP27B1O15528 508 aa19.62■□□□□ 0.73
ERCC1-205ENST00000587888 TIMELESSQ9UNS1 1208 aa19.62■□□□□ 0.73
ERCC1-205ENST00000587888 TUBGCP6Q96RT7 1819 aa19.62■□□□□ 0.73
ERCC1-205ENST00000587888 KIF24Q5T7B8 1368 aa19.61■□□□□ 0.73
ERCC1-205ENST00000587888 MSL1Q68DK7 614 aa19.6■□□□□ 0.73
ERCC1-205ENST00000587888 NLGN2Q8NFZ4 835 aa19.6■□□□□ 0.73
ERCC1-205ENST00000587888 PALLDQ8WX93 1383 aa19.58■□□□□ 0.73
ERCC1-205ENST00000587888 TNNT2P45379 298 aaPredicted RBP19.58■□□□□ 0.72
ERCC1-205ENST00000587888 SPG7Q9UQ90 795 aa19.58■□□□□ 0.72
ERCC1-205ENST00000587888 WASHC2AQ641Q2 1341 aa19.57■□□□□ 0.72
ERCC1-205ENST00000587888 PIGBQ92521 554 aa19.57■□□□□ 0.72
ERCC1-205ENST00000587888 EYA1Q99502 592 aa19.57■□□□□ 0.72
ERCC1-205ENST00000587888 CHD4Q14839 1912 aa19.57■□□□□ 0.72
ERCC1-205ENST00000587888 SMARCC1Q92922 1105 aaPredicted RBP19.56■□□□□ 0.72
ERCC1-205ENST00000587888 POLKQ9UBT6 870 aa19.56■□□□□ 0.72
ERCC1-205ENST00000587888 HMGB2P26583 209 aaKnown RBP19.55■□□□□ 0.72
ERCC1-205ENST00000587888 COL24A1Q17RW2 1714 aa19.55■□□□□ 0.72
ERCC1-205ENST00000587888 MAP2P11137 1827 aaKnown RBP19.54■□□□□ 0.72
ERCC1-205ENST00000587888 NKX1-1Q15270 411 aaPredicted RBP19.54■□□□□ 0.72
ERCC1-205ENST00000587888 FLAD1Q8NFF5 587 aa19.54■□□□□ 0.72
ERCC1-205ENST00000587888 SMIM5Q71RC9 77 aa19.53■□□□□ 0.72
ERCC1-205ENST00000587888 AK7Q96M32 723 aa19.53■□□□□ 0.72
ERCC1-205ENST00000587888 C5P01031 1676 aa19.52■□□□□ 0.72
ERCC1-205ENST00000587888 PHF14O94880 888 aa19.52■□□□□ 0.72
ERCC1-205ENST00000587888 ITGB4P16144 1822 aa19.52■□□□□ 0.72
ERCC1-205ENST00000587888 YBX3P16989 372 aaKnown RBP eCLIP19.51■□□□□ 0.713e-8■□□□□ 9.1
ERCC1-205ENST00000587888 TMOD3Q9NYL9 352 aa19.51■□□□□ 0.71
ERCC1-205ENST00000587888 TOGARAM1Q9Y4F4 1720 aa19.51■□□□□ 0.71
ERCC1-205ENST00000587888 CLSPNQ9HAW4 1339 aa19.51■□□□□ 0.71
ERCC1-205ENST00000587888 EIF4A2Q14240 407 aaKnown RBP19.5■□□□□ 0.71
ERCC1-205ENST00000587888 IFNL2Q8IZJ0 200 aa19.5■□□□□ 0.71
ERCC1-205ENST00000587888 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.5■□□□□ 0.71
ERCC1-205ENST00000587888 ASAP1Q9ULH1 1129 aa19.5■□□□□ 0.71
ERCC1-205ENST00000587888 TAF1LQ8IZX4 1826 aa19.49■□□□□ 0.71
ERCC1-205ENST00000587888 PKD1L3Q7Z443 1732 aa19.49■□□□□ 0.71
ERCC1-205ENST00000587888 HSPA5P11021 654 aaKnown RBP19.49■□□□□ 0.71
ERCC1-205ENST00000587888 PHKG2P15735 406 aa19.49■□□□□ 0.71
ERCC1-205ENST00000587888 EIF4G2P78344 907 aaKnown RBP eCLIP19.49■□□□□ 0.71
ERCC1-205ENST00000587888 AMIGO3Q86WK7 504 aa19.49■□□□□ 0.71
ERCC1-205ENST00000587888 PANK3Q9H999 370 aa19.49■□□□□ 0.71
ERCC1-205ENST00000587888 NCAPD2Q15021 1401 aa19.49■□□□□ 0.71
ERCC1-205ENST00000587888 LOC102724428A0A0B4J2F2 783 aa19.48■□□□□ 0.71
ERCC1-205ENST00000587888 SIK1P57059 783 aa19.48■□□□□ 0.71
ERCC1-205ENST00000587888 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.47■□□□□ 0.71
ERCC1-205ENST00000587888 GRIN3BO60391 1043 aa19.47■□□□□ 0.71
ERCC1-205ENST00000587888 LINC00116Q8NCU8 138 aa19.47■□□□□ 0.71
ERCC1-205ENST00000587888 CD2APQ9Y5K6 639 aa19.47■□□□□ 0.71
ERCC1-205ENST00000587888 C4BP0C0L5 1744 aa19.47■□□□□ 0.71
ERCC1-205ENST00000587888 ANKRD26Q9UPS8 1709 aa19.46■□□□□ 0.71
ERCC1-205ENST00000587888 ATP6V1AP38606 617 aa19.46■□□□□ 0.71
ERCC1-205ENST00000587888 C1QTNF8P60827 252 aa19.46■□□□□ 0.71
ERCC1-205ENST00000587888 ATG3Q9NT62 314 aa19.45■□□□□ 0.7
ERCC1-205ENST00000587888 ITPK1Q13572 414 aa19.44■□□□□ 0.7
ERCC1-205ENST00000587888 SENP3-EIF4A1A0A087X0R7 540 aa19.43■□□□□ 0.7
ERCC1-205ENST00000587888 GNPATO15228 680 aa19.43■□□□□ 0.7
ERCC1-205ENST00000587888 WWC3Q9ULE0 1092 aa19.43■□□□□ 0.7
ERCC1-205ENST00000587888 SSFA2P28290 1259 aa19.42■□□□□ 0.7
ERCC1-205ENST00000587888 CCER1Q8TC90 406 aaPredicted RBP19.42■□□□□ 0.7
ERCC1-205ENST00000587888 RBM42Q9BTD8 480 aaKnown RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms