RNA–Protein interactions for RNA: ENST00000587799.1

RANBP3-212, Transcript of RAN binding protein 3, humanhuman

TSL 2

Gene RANBP3, Length 403 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-212ENST00000587799 CCDC125Q86Z20 511 aa13.18□□□□□ -0.3
RANBP3-212ENST00000587799 PCDH11XQ9BZA7 1347 aa13.17□□□□□ -0.3
RANBP3-212ENST00000587799 PCDH11YQ9BZA8 1340 aa13.17□□□□□ -0.3
RANBP3-212ENST00000587799 ANP32CO43423 234 aa13.16□□□□□ -0.3
RANBP3-212ENST00000587799 AMOTQ4VCS5 1084 aa13.16□□□□□ -0.3
RANBP3-212ENST00000587799 ZCRB1Q8TBF4 217 aaKnown RBP13.16□□□□□ -0.3
RANBP3-212ENST00000587799 SPG7Q9UQ90 795 aa13.16□□□□□ -0.3
RANBP3-212ENST00000587799 SOCS7O14512 581 aa13.15□□□□□ -0.3
RANBP3-212ENST00000587799 CNGB1Q14028 1251 aaPredicted RBP13.14□□□□□ -0.31
RANBP3-212ENST00000587799 USHBP1Q8N6Y0 703 aa13.14□□□□□ -0.31
RANBP3-212ENST00000587799 SHANK3Q9BYB0 1731 aa13.13□□□□□ -0.31
RANBP3-212ENST00000587799 FCHSD2O94868 740 aa13.13□□□□□ -0.31
RANBP3-212ENST00000587799 PLEKHO1Q53GL0 409 aaPredicted RBP13.13□□□□□ -0.31
RANBP3-212ENST00000587799 SULT6B1Q6IMI4 303 aa13.13□□□□□ -0.31
RANBP3-212ENST00000587799 MARCH10Q8NA82 808 aaPredicted RBP13.13□□□□□ -0.31
RANBP3-212ENST00000587799 PNNQ9H307 717 aaKnown RBP13.13□□□□□ -0.31
RANBP3-212ENST00000587799 HSP90AB1P08238 724 aaKnown RBP13.12□□□□□ -0.31
RANBP3-212ENST00000587799 NKX1-1Q15270 411 aaPredicted RBP13.12□□□□□ -0.31
RANBP3-212ENST00000587799 U2SURPO15042 1029 aaKnown RBP13.11□□□□□ -0.31
RANBP3-212ENST00000587799 NHSQ6T4R5 1651 aa13.1□□□□□ -0.31
RANBP3-212ENST00000587799 U2AF1L5P0DN76 240 aaPredicted RBP13.1□□□□□ -0.31
RANBP3-212ENST00000587799 U2AF1Q01081 240 aaKnown RBP eCLIP13.1□□□□□ -0.31
RANBP3-212ENST00000587799 AEBP1Q8IUX7 1158 aa13.1□□□□□ -0.31
RANBP3-212ENST00000587799 IFNL2Q8IZJ0 200 aa13.1□□□□□ -0.31
RANBP3-212ENST00000587799 UPF1Q92900 1129 aaKnown RBP eCLIP13.1□□□□□ -0.31
RANBP3-212ENST00000587799 RSPH6AQ9H0K4 717 aa13.1□□□□□ -0.31
RANBP3-212ENST00000587799 RGPD3A6NKT7 1758 aaPredicted RBP13.09□□□□□ -0.31
RANBP3-212ENST00000587799 RGPD4Q7Z3J3 1758 aa13.09□□□□□ -0.31
RANBP3-212ENST00000587799 CYP27B1O15528 508 aa13.09□□□□□ -0.31
RANBP3-212ENST00000587799 GAS2L2Q8NHY3 880 aa13.09□□□□□ -0.31
RANBP3-212ENST00000587799 BCL11BQ9C0K0 894 aaPredicted RBP13.09□□□□□ -0.31
RANBP3-212ENST00000587799 NEFMP07197 916 aa13.08□□□□□ -0.32
RANBP3-212ENST00000587799 PHKG2P15735 406 aa13.08□□□□□ -0.32
RANBP3-212ENST00000587799 SF3B2Q13435 895 aaKnown RBP13.08□□□□□ -0.32
RANBP3-212ENST00000587799 TNS1Q9HBL0 1735 aaKnown RBP13.08□□□□□ -0.32
RANBP3-212ENST00000587799 SBF2Q86WG5 1849 aa13.07□□□□□ -0.32
RANBP3-212ENST00000587799 HMOX1P09601 288 aa13.07□□□□□ -0.32
RANBP3-212ENST00000587799 WDR43Q15061 677 aaKnown RBP eCLIP13.07□□□□□ -0.32
RANBP3-212ENST00000587799 AKAP4Q5JQC9 854 aa13.07□□□□□ -0.32
RANBP3-212ENST00000587799 C1orf141Q5JVX7 400 aa13.07□□□□□ -0.32
RANBP3-212ENST00000587799 DDX54Q8TDD1 881 aaKnown RBP13.07□□□□□ -0.32
RANBP3-212ENST00000587799 DCAF5Q96JK2 942 aa13.07□□□□□ -0.32
RANBP3-212ENST00000587799 ADAMTS7Q9UKP4 1686 aa13.06□□□□□ -0.32
RANBP3-212ENST00000587799 HMGB2P26583 209 aaKnown RBP13.06□□□□□ -0.32
RANBP3-212ENST00000587799 PRKAR2BP31323 418 aa13.06□□□□□ -0.32
RANBP3-212ENST00000587799 ZNF530Q6P9A1 599 aaPredicted RBP13.06□□□□□ -0.32
RANBP3-212ENST00000587799 MRC1P22897 1456 aa13.05□□□□□ -0.32
RANBP3-212ENST00000587799 ERVV-2B6SEH9 535 aa13.05□□□□□ -0.32
RANBP3-212ENST00000587799 BAG6P46379 1132 aa13.05□□□□□ -0.32
RANBP3-212ENST00000587799 DOT1LQ8TEK3 1739 aa13.05□□□□□ -0.32
RANBP3-212ENST00000587799 PLSCR1O15162 318 aa13.04□□□□□ -0.32
RANBP3-212ENST00000587799 HTATSF1O43719 755 aaKnown RBP13.04□□□□□ -0.32
RANBP3-212ENST00000587799 FAM182BQ5T319 152 aa13.04□□□□□ -0.32
RANBP3-212ENST00000587799 MAP3K5Q99683 1374 aa13.04□□□□□ -0.32
RANBP3-212ENST00000587799 TRIM37O94972 964 aa13.03□□□□□ -0.32
RANBP3-212ENST00000587799 PLEKHF1Q96S99 279 aa13.03□□□□□ -0.32
RANBP3-212ENST00000587799 MAPK8IP3Q9UPT6 1336 aa13.03□□□□□ -0.32
RANBP3-212ENST00000587799 KDM6AO15550 1401 aaPredicted RBP13.03□□□□□ -0.32
RANBP3-212ENST00000587799 TOGARAM1Q9Y4F4 1720 aa13.02□□□□□ -0.32
RANBP3-212ENST00000587799 CCER2I3L3R5 266 aa13.02□□□□□ -0.33
RANBP3-212ENST00000587799 MTHFSDQ2M296 383 aaKnown RBP13.02□□□□□ -0.33
RANBP3-212ENST00000587799 MRS2Q9HD23 443 aa13.02□□□□□ -0.33
RANBP3-212ENST00000587799 GNAT3A8MTJ3 354 aa13.01□□□□□ -0.33
RANBP3-212ENST00000587799 NCBP3Q53F19 620 aaKnown RBP13.01□□□□□ -0.33
RANBP3-212ENST00000587799 DIEXFQ68CQ4 756 aaKnown RBP13.01□□□□□ -0.33
RANBP3-212ENST00000587799 CEMIPQ8WUJ3 1361 aa13.01□□□□□ -0.33
RANBP3-212ENST00000587799 SCN11AQ9UI33 1791 aa13□□□□□ -0.33
RANBP3-212ENST00000587799 LMOD3Q0VAK6 560 aa13□□□□□ -0.33
RANBP3-212ENST00000587799 PNISRQ8TF01 805 aaKnown RBP13□□□□□ -0.33
RANBP3-212ENST00000587799 SMARCC1Q92922 1105 aaPredicted RBP13□□□□□ -0.33
RANBP3-212ENST00000587799 RUNDC1Q96C34 613 aa13□□□□□ -0.33
RANBP3-212ENST00000587799 PHACTR3Q96KR7 559 aa13□□□□□ -0.33
RANBP3-212ENST00000587799 BTAF1O14981 1849 aa12.99□□□□□ -0.33
RANBP3-212ENST00000587799 APBA3O96018 575 aa12.99□□□□□ -0.33
RANBP3-212ENST00000587799 PRIM1P49642 420 aaKnown RBP12.99□□□□□ -0.33
RANBP3-212ENST00000587799 NFE2L2Q16236 605 aa12.99□□□□□ -0.33
RANBP3-212ENST00000587799 TMOD3Q9NYL9 352 aa12.99□□□□□ -0.33
RANBP3-212ENST00000587799 ADAMTS8Q9UP79 889 aa12.99□□□□□ -0.33
RANBP3-212ENST00000587799 RREB1Q92766 1687 aa12.99□□□□□ -0.33
RANBP3-212ENST00000587799 KCNQ2O43526 872 aa12.98□□□□□ -0.33
RANBP3-212ENST00000587799 SLC27A3Q5K4L6 730 aa12.98□□□□□ -0.33
RANBP3-212ENST00000587799 NGEFQ8N5V2 710 aa12.98□□□□□ -0.33
RANBP3-212ENST00000587799 ACSBG1Q96GR2 724 aa12.98□□□□□ -0.33
RANBP3-212ENST00000587799 CAMKK2Q96RR4 588 aa12.98□□□□□ -0.33
RANBP3-212ENST00000587799 SLC52A2Q9HAB3 445 aa12.98□□□□□ -0.33
RANBP3-212ENST00000587799 ITGB4P16144 1822 aa12.97□□□□□ -0.33
RANBP3-212ENST00000587799 ZNF831Q5JPB2 1677 aa12.97□□□□□ -0.33
RANBP3-212ENST00000587799 RNMTO43148 476 aaKnown RBP12.97□□□□□ -0.33
RANBP3-212ENST00000587799 RTF1Q92541 710 aaKnown RBP12.97□□□□□ -0.33
RANBP3-212ENST00000587799 SYTL4Q96C24 671 aaPredicted RBP12.97□□□□□ -0.33
RANBP3-212ENST00000587799 CICQ96RK0 1608 aaPredicted RBP12.96□□□□□ -0.33
RANBP3-212ENST00000587799 CABP4P57796 275 aa12.96□□□□□ -0.33
RANBP3-212ENST00000587799 MPRIPQ6WCQ1 1025 aa12.96□□□□□ -0.33
RANBP3-212ENST00000587799 PIGBQ92521 554 aa12.96□□□□□ -0.33
RANBP3-212ENST00000587799 LY75O60449 1722 aa12.96□□□□□ -0.34
RANBP3-212ENST00000587799 PALLDQ8WX93 1383 aa12.95□□□□□ -0.34
RANBP3-212ENST00000587799 TEFQ10587 303 aa12.95□□□□□ -0.34
RANBP3-212ENST00000587799 PAPPAQ13219 1627 aa12.95□□□□□ -0.34
RANBP3-212ENST00000587799 KAT6BQ8WYB5 2073 aa12.94□□□□□ -0.34
RANBP3-212ENST00000587799 TMPOP42166 694 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms