RNA–Protein interactions for RNA: ENST00000587739.1

CHAF1A-206, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 875 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-206ENST00000587739 LRRC37A3O60309 1634 aa13.15□□□□□ -0.3
CHAF1A-206ENST00000587739 CYP27B1O15528 508 aa13.15□□□□□ -0.3
CHAF1A-206ENST00000587739 HMOX1P09601 288 aa13.15□□□□□ -0.3
CHAF1A-206ENST00000587739 TATP17735 454 aaPredicted RBP13.15□□□□□ -0.3
CHAF1A-206ENST00000587739 OVOS2A0A0G2JMS6 1433 aa13.14□□□□□ -0.31
CHAF1A-206ENST00000587739 DDX54Q8TDD1 881 aaKnown RBP13.14□□□□□ -0.31
CHAF1A-206ENST00000587739 RAPGEF4Q8WZA2 1011 aa13.14□□□□□ -0.31
CHAF1A-206ENST00000587739 KDRP35968 1356 aa13.14□□□□□ -0.31
CHAF1A-206ENST00000587739 MYBBP1AQ9BQG0 1328 aaKnown RBP13.13□□□□□ -0.31
CHAF1A-206ENST00000587739 SF3B2Q13435 895 aaKnown RBP13.13□□□□□ -0.31
CHAF1A-206ENST00000587739 U2SURPO15042 1029 aaKnown RBP13.12□□□□□ -0.31
CHAF1A-206ENST00000587739 KCNQ2O43526 872 aa13.12□□□□□ -0.31
CHAF1A-206ENST00000587739 FAM196AQ6ZSG2 479 aa13.12□□□□□ -0.31
CHAF1A-206ENST00000587739 SHANK3Q9BYB0 1731 aa13.12□□□□□ -0.31
CHAF1A-206ENST00000587739 TNS2Q63HR2 1409 aa13.12□□□□□ -0.31
CHAF1A-206ENST00000587739 PHACTR3Q96KR7 559 aa13.11□□□□□ -0.31
CHAF1A-206ENST00000587739 CFAP53Q96M91 514 aa13.11□□□□□ -0.31
CHAF1A-206ENST00000587739 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.11□□□□□ -0.31
CHAF1A-206ENST00000587739 PSDA5PKW4 1024 aaPredicted RBP13.1□□□□□ -0.31
CHAF1A-206ENST00000587739 TRIM37O94972 964 aa13.1□□□□□ -0.31
CHAF1A-206ENST00000587739 NKX1-1Q15270 411 aaPredicted RBP13.1□□□□□ -0.31
CHAF1A-206ENST00000587739 ACSBG1Q96GR2 724 aa13.1□□□□□ -0.31
CHAF1A-206ENST00000587739 RSPH6AQ9H0K4 717 aa13.1□□□□□ -0.31
CHAF1A-206ENST00000587739 BCL9O00512 1426 aa13.1□□□□□ -0.31
CHAF1A-206ENST00000587739 TNS1Q9HBL0 1735 aaKnown RBP13.1□□□□□ -0.31
CHAF1A-206ENST00000587739 MTHFSDQ2M296 383 aaKnown RBP13.09□□□□□ -0.31
CHAF1A-206ENST00000587739 KAT6BQ8WYB5 2073 aa13.09□□□□□ -0.31
CHAF1A-206ENST00000587739 SBF2Q86WG5 1849 aa13.09□□□□□ -0.31
CHAF1A-206ENST00000587739 U2AF1L5P0DN76 240 aaPredicted RBP13.08□□□□□ -0.32
CHAF1A-206ENST00000587739 PHKG2P15735 406 aa13.08□□□□□ -0.32
CHAF1A-206ENST00000587739 U2AF1Q01081 240 aaKnown RBP eCLIP13.08□□□□□ -0.32
CHAF1A-206ENST00000587739 PLEKHO1Q53GL0 409 aaPredicted RBP13.08□□□□□ -0.32
CHAF1A-206ENST00000587739 PLEKHF1Q96S99 279 aa13.08□□□□□ -0.32
CHAF1A-206ENST00000587739 FCHSD2O94868 740 aa13.07□□□□□ -0.32
CHAF1A-206ENST00000587739 EN1Q05925 392 aaPredicted RBP13.07□□□□□ -0.32
CHAF1A-206ENST00000587739 SPG7Q9UQ90 795 aa13.07□□□□□ -0.32
CHAF1A-206ENST00000587739 NUDCQ9Y266 331 aa13.07□□□□□ -0.32
CHAF1A-206ENST00000587739 PKD1L3Q7Z443 1732 aa13.07□□□□□ -0.32
CHAF1A-206ENST00000587739 ANP32CO43423 234 aa13.06□□□□□ -0.32
CHAF1A-206ENST00000587739 PRKAR2BP31323 418 aa13.06□□□□□ -0.32
CHAF1A-206ENST00000587739 BAG6P46379 1132 aa13.06□□□□□ -0.32
CHAF1A-206ENST00000587739 PRIM1P49642 420 aaKnown RBP13.06□□□□□ -0.32
CHAF1A-206ENST00000587739 AMOTQ4VCS5 1084 aa13.06□□□□□ -0.32
CHAF1A-206ENST00000587739 IFNL2Q8IZJ0 200 aa13.06□□□□□ -0.32
CHAF1A-206ENST00000587739 PROM2Q8N271 834 aa13.06□□□□□ -0.32
CHAF1A-206ENST00000587739 BCL11BQ9C0K0 894 aaPredicted RBP13.06□□□□□ -0.32
CHAF1A-206ENST00000587739 ZNF530Q6P9A1 599 aaPredicted RBP13.05□□□□□ -0.32
CHAF1A-206ENST00000587739 CAMKK2Q96RR4 588 aa13.05□□□□□ -0.32
CHAF1A-206ENST00000587739 LGR6Q9HBX8 967 aa13.05□□□□□ -0.32
CHAF1A-206ENST00000587739 ADAMTS8Q9UP79 889 aa13.05□□□□□ -0.32
CHAF1A-206ENST00000587739 PCDH11XQ9BZA7 1347 aa13.05□□□□□ -0.32
CHAF1A-206ENST00000587739 PCDH11YQ9BZA8 1340 aa13.05□□□□□ -0.32
CHAF1A-206ENST00000587739 LRP5O75197 1615 aa13.04□□□□□ -0.32
CHAF1A-206ENST00000587739 PNISRQ8TF01 805 aaKnown RBP13.04□□□□□ -0.32
CHAF1A-206ENST00000587739 PLEKHG2Q9H7P9 1386 aa13.04□□□□□ -0.32
CHAF1A-206ENST00000587739 APBA3O96018 575 aa13.03□□□□□ -0.32
CHAF1A-206ENST00000587739 MPRIPQ6WCQ1 1025 aa13.03□□□□□ -0.32
CHAF1A-206ENST00000587739 EZH2Q15910 746 aaKnown RBP13.02□□□□□ -0.33
CHAF1A-206ENST00000587739 AKAP4Q5JQC9 854 aa13.02□□□□□ -0.33
CHAF1A-206ENST00000587739 IL17REQ8NFR9 667 aa13.02□□□□□ -0.33
CHAF1A-206ENST00000587739 PIGBQ92521 554 aa13.02□□□□□ -0.33
CHAF1A-206ENST00000587739 KDM6AO15550 1401 aaPredicted RBP13.02□□□□□ -0.33
CHAF1A-206ENST00000587739 PLSCR1O15162 318 aa13.01□□□□□ -0.33
CHAF1A-206ENST00000587739 R3HDM1Q15032 1099 aaKnown RBP13.01□□□□□ -0.33
CHAF1A-206ENST00000587739 TOGARAM1Q9Y4F4 1720 aa13.01□□□□□ -0.33
CHAF1A-206ENST00000587739 RNMTO43148 476 aaKnown RBP13□□□□□ -0.33
CHAF1A-206ENST00000587739 DIEXFQ68CQ4 756 aaKnown RBP13□□□□□ -0.33
CHAF1A-206ENST00000587739 CCDC146Q8IYE0 955 aa13□□□□□ -0.33
CHAF1A-206ENST00000587739 DCAF5Q96JK2 942 aa13□□□□□ -0.33
CHAF1A-206ENST00000587739 ERVV-2B6SEH9 535 aa12.99□□□□□ -0.33
CHAF1A-206ENST00000587739 SYTL4Q96C24 671 aaPredicted RBP12.99□□□□□ -0.33
CHAF1A-206ENST00000587739 ITGB4P16144 1822 aa12.99□□□□□ -0.33
CHAF1A-206ENST00000587739 C1orf141Q5JVX7 400 aa12.98□□□□□ -0.33
CHAF1A-206ENST00000587739 MIER1Q8N108 512 aa12.98□□□□□ -0.33
CHAF1A-206ENST00000587739 NFATC2IPQ8NCF5 419 aa12.98□□□□□ -0.33
CHAF1A-206ENST00000587739 GAS2L2Q8NHY3 880 aa12.98□□□□□ -0.33
CHAF1A-206ENST00000587739 MRS2Q9HD23 443 aa12.98□□□□□ -0.33
CHAF1A-206ENST00000587739 LRRC4BQ9NT99 713 aa12.98□□□□□ -0.33
CHAF1A-206ENST00000587739 ASAP1Q9ULH1 1129 aa12.98□□□□□ -0.33
CHAF1A-206ENST00000587739 NUP188Q5SRE5 1749 aa12.98□□□□□ -0.33
CHAF1A-206ENST00000587739 DOT1LQ8TEK3 1739 aa12.98□□□□□ -0.33
CHAF1A-206ENST00000587739 NHSQ6T4R5 1651 aa12.98□□□□□ -0.33
CHAF1A-206ENST00000587739 RREB1Q92766 1687 aa12.98□□□□□ -0.33
CHAF1A-206ENST00000587739 GNAT3A8MTJ3 354 aa12.97□□□□□ -0.33
CHAF1A-206ENST00000587739 HSP90AB1P08238 724 aaKnown RBP12.97□□□□□ -0.33
CHAF1A-206ENST00000587739 KCNQ4P56696 695 aa12.97□□□□□ -0.33
CHAF1A-206ENST00000587739 DCTN1Q14203 1278 aa12.97□□□□□ -0.33
CHAF1A-206ENST00000587739 ATG3Q9NT62 314 aa12.97□□□□□ -0.33
CHAF1A-206ENST00000587739 BTAF1O14981 1849 aa12.97□□□□□ -0.33
CHAF1A-206ENST00000587739 WDR43Q15061 677 aaKnown RBP eCLIP12.96□□□□□ -0.33
CHAF1A-206ENST00000587739 NFE2L2Q16236 605 aa12.96□□□□□ -0.33
CHAF1A-206ENST00000587739 TXNRD1Q16881 649 aa12.96□□□□□ -0.33
CHAF1A-206ENST00000587739 MCM10Q7L590 875 aa12.96□□□□□ -0.33
CHAF1A-206ENST00000587739 RUNDC1Q96C34 613 aa12.96□□□□□ -0.33
CHAF1A-206ENST00000587739 SLC4A9Q96Q91 983 aa12.96□□□□□ -0.33
CHAF1A-206ENST00000587739 ADAMTS7Q9UKP4 1686 aa12.96□□□□□ -0.34
CHAF1A-206ENST00000587739 SENP3-EIF4A1A0A087X0R7 540 aa12.95□□□□□ -0.34
CHAF1A-206ENST00000587739 TMPOP42166 694 aaKnown RBP12.95□□□□□ -0.34
CHAF1A-206ENST00000587739 SLC52A2Q9HAB3 445 aa12.95□□□□□ -0.34
CHAF1A-206ENST00000587739 RRP7AQ9Y3A4 280 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms