RNA–Protein interactions for RNA: ENST00000587654.5

TNPO2-208, Transcript of transportin 2, humanhuman

TSL 4

Gene TNPO2, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO2-208ENST00000587654 SLC16A10Q8TF71 515 aa22.22■■□□□ 1.15
TNPO2-208ENST00000587654 COG3Q96JB2 828 aa22.22■■□□□ 1.15
TNPO2-208ENST00000587654 TESK2Q96S53 571 aa22.22■■□□□ 1.15
TNPO2-208ENST00000587654 C5P01031 1676 aa22.2■■□□□ 1.15
TNPO2-208ENST00000587654 SYTL4Q96C24 671 aaPredicted RBP22.2■■□□□ 1.14
TNPO2-208ENST00000587654 AMPHP49418 695 aa22.19■■□□□ 1.14
TNPO2-208ENST00000587654 PRIM1P49642 420 aaKnown RBP22.19■■□□□ 1.14
TNPO2-208ENST00000587654 POLD1P28340 1107 aa22.18■■□□□ 1.14
TNPO2-208ENST00000587654 KCNQ4P56696 695 aa22.18■■□□□ 1.14
TNPO2-208ENST00000587654 ST20-MTHFSA0A0A6YYL1 179 aa22.17■■□□□ 1.14
TNPO2-208ENST00000587654 FBLN1P23142 703 aa22.17■■□□□ 1.14
TNPO2-208ENST00000587654 GPR162Q16538 588 aa22.17■■□□□ 1.14
TNPO2-208ENST00000587654 KLHL34Q8N239 644 aa22.17■■□□□ 1.14
TNPO2-208ENST00000587654 TFCP2L1Q9NZI6 479 aa22.17■■□□□ 1.14
TNPO2-208ENST00000587654 TAF1LQ8IZX4 1826 aa22.17■■□□□ 1.14
TNPO2-208ENST00000587654 ZCRB1Q8TBF4 217 aaKnown RBP22.16■■□□□ 1.14
TNPO2-208ENST00000587654 SMG6Q86US8 1419 aaKnown RBP22.14■■□□□ 1.14
TNPO2-208ENST00000587654 TOGARAM1Q9Y4F4 1720 aa22.14■■□□□ 1.14
TNPO2-208ENST00000587654 CCNL1Q9UK58 526 aaPredicted RBP22.14■■□□□ 1.13
TNPO2-208ENST00000587654 USP47Q96K76 1375 aa22.12■■□□□ 1.13
TNPO2-208ENST00000587654 PKD1L3Q7Z443 1732 aa22.12■■□□□ 1.13
TNPO2-208ENST00000587654 RRS1Q15050 365 aaKnown RBP22.12■■□□□ 1.13
TNPO2-208ENST00000587654 NLGN2Q8NFZ4 835 aa22.12■■□□□ 1.13
TNPO2-208ENST00000587654 CGNL1Q0VF96 1302 aa22.11■■□□□ 1.13
TNPO2-208ENST00000587654 ITGB4P16144 1822 aa22.11■■□□□ 1.13
TNPO2-208ENST00000587654 SLC24A1O60721 1099 aa22.11■■□□□ 1.13
TNPO2-208ENST00000587654 C1QTNF8P60827 252 aa22.11■■□□□ 1.13
TNPO2-208ENST00000587654 NBPF6Q5VWK0 638 aa22.11■■□□□ 1.13
TNPO2-208ENST00000587654 USHBP1Q8N6Y0 703 aa22.11■■□□□ 1.13
TNPO2-208ENST00000587654 NBPF4Q96M43 638 aa22.11■■□□□ 1.13
TNPO2-208ENST00000587654 PELP1Q8IZL8 1130 aaKnown RBP22.1■■□□□ 1.13
TNPO2-208ENST00000587654 SENP3-EIF4A1A0A087X0R7 540 aa22.09■■□□□ 1.13
TNPO2-208ENST00000587654 ANKRD26Q9UPS8 1709 aa22.09■■□□□ 1.13
TNPO2-208ENST00000587654 GOLGB1Q14789 3259 aaKnown RBP22.08■■□□□ 1.13
TNPO2-208ENST00000587654 FYB1O15117 783 aa22.08■■□□□ 1.13
TNPO2-208ENST00000587654 RAPGEF4Q8WZA2 1011 aa22.08■■□□□ 1.13
TNPO2-208ENST00000587654 GGNBP2Q9H3C7 697 aa22.08■■□□□ 1.13
TNPO2-208ENST00000587654 C4BP0C0L5 1744 aa22.08■■□□□ 1.12
TNPO2-208ENST00000587654 INSRP06213 1382 aa22.07■■□□□ 1.12
TNPO2-208ENST00000587654 FLT4P35916 1363 aa22.07■■□□□ 1.12
TNPO2-208ENST00000587654 PCDH11XQ9BZA7 1347 aa22.06■■□□□ 1.12
TNPO2-208ENST00000587654 PCDH11YQ9BZA8 1340 aa22.06■■□□□ 1.12
TNPO2-208ENST00000587654 COL23A1Q86Y22 540 aaPredicted RBP22.06■■□□□ 1.12
TNPO2-208ENST00000587654 UBR3Q6ZT12 1888 aa22.05■■□□□ 1.12
TNPO2-208ENST00000587654 KIF24Q5T7B8 1368 aa22.05■■□□□ 1.12
TNPO2-208ENST00000587654 MSH5O43196 834 aa22.05■■□□□ 1.12
TNPO2-208ENST00000587654 TATP17735 454 aaPredicted RBP22.05■■□□□ 1.12
TNPO2-208ENST00000587654 PALLDQ8WX93 1383 aa22.04■■□□□ 1.12
TNPO2-208ENST00000587654 TMF1P82094 1093 aa22.04■■□□□ 1.12
TNPO2-208ENST00000587654 GIGYF1O75420 1035 aaPredicted RBP22.03■■□□□ 1.12
TNPO2-208ENST00000587654 YBX3P16989 372 aaKnown RBP eCLIP22.03■■□□□ 1.122e-9■■■■□ 24.1
TNPO2-208ENST00000587654 MSL1Q68DK7 614 aa22.03■■□□□ 1.12
TNPO2-208ENST00000587654 HSP90AB2PQ58FF8 381 aa22.02■■□□□ 1.12
TNPO2-208ENST00000587654 NCAPD2Q15021 1401 aa22.02■■□□□ 1.12
TNPO2-208ENST00000587654 MAP2P11137 1827 aaKnown RBP22.01■■□□□ 1.11
TNPO2-208ENST00000587654 GRIN3BO60391 1043 aa21.99■■□□□ 1.11
TNPO2-208ENST00000587654 NSD3Q9BZ95 1437 aa21.98■■□□□ 1.11
TNPO2-208ENST00000587654 CYP27B1O15528 508 aa21.98■■□□□ 1.11
TNPO2-208ENST00000587654 MPRIPQ6WCQ1 1025 aa21.97■■□□□ 1.11
TNPO2-208ENST00000587654 FLAD1Q8NFF5 587 aa21.97■■□□□ 1.11
TNPO2-208ENST00000587654 HMGB2P26583 209 aaKnown RBP21.96■■□□□ 1.11
TNPO2-208ENST00000587654 CDCA8Q53HL2 280 aa21.95■■□□□ 1.1
TNPO2-208ENST00000587654 CD2APQ9Y5K6 639 aa21.95■■□□□ 1.1
TNPO2-208ENST00000587654 EMILIN1Q9Y6C2 1016 aa21.95■■□□□ 1.1
TNPO2-208ENST00000587654 ATP10DQ9P241 1426 aa21.95■■□□□ 1.1
TNPO2-208ENST00000587654 SMARCC1Q92922 1105 aaPredicted RBP21.94■■□□□ 1.1
TNPO2-208ENST00000587654 AK7Q96M32 723 aa21.94■■□□□ 1.1
TNPO2-208ENST00000587654 AMIGO3Q86WK7 504 aa21.92■■□□□ 1.1
TNPO2-208ENST00000587654 CARD14Q9BXL6 1004 aa21.92■■□□□ 1.1
TNPO2-208ENST00000587654 ADCY9O60503 1353 aa21.91■■□□□ 1.1
TNPO2-208ENST00000587654 PIGBQ92521 554 aa21.9■■□□□ 1.1
TNPO2-208ENST00000587654 PHF14O94880 888 aa21.89■■□□□ 1.09
TNPO2-208ENST00000587654 NKX1-1Q15270 411 aaPredicted RBP21.89■■□□□ 1.09
TNPO2-208ENST00000587654 SPG7Q9UQ90 795 aa21.88■■□□□ 1.09
TNPO2-208ENST00000587654 CICQ96RK0 1608 aaPredicted RBP21.88■■□□□ 1.09
TNPO2-208ENST00000587654 KIF13BQ9NQT8 1826 aa21.87■■□□□ 1.09
TNPO2-208ENST00000587654 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.87■■□□□ 1.09
TNPO2-208ENST00000587654 KIAA1551Q9HCM1 1747 aa21.86■■□□□ 1.09
TNPO2-208ENST00000587654 WASHC2AQ641Q2 1341 aa21.86■■□□□ 1.09
TNPO2-208ENST00000587654 IGSF1Q8N6C5 1336 aa21.86■■□□□ 1.09
TNPO2-208ENST00000587654 ZNF831Q5JPB2 1677 aa21.86■■□□□ 1.09
TNPO2-208ENST00000587654 PPM1GO15355 546 aaPredicted RBP21.86■■□□□ 1.09
TNPO2-208ENST00000587654 SSFA2P28290 1259 aa21.86■■□□□ 1.09
TNPO2-208ENST00000587654 SMIM5Q71RC9 77 aa21.86■■□□□ 1.09
TNPO2-208ENST00000587654 LINC00116Q8NCU8 138 aa21.86■■□□□ 1.09
TNPO2-208ENST00000587654 LOC102724428A0A0B4J2F2 783 aa21.85■■□□□ 1.09
TNPO2-208ENST00000587654 SIK1P57059 783 aa21.85■■□□□ 1.09
TNPO2-208ENST00000587654 COL5A3P25940 1745 aaPredicted RBP21.85■■□□□ 1.09
TNPO2-208ENST00000587654 TMOD3Q9NYL9 352 aa21.84■■□□□ 1.09
TNPO2-208ENST00000587654 EYA1Q99502 592 aa21.83■■□□□ 1.09
TNPO2-208ENST00000587654 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.83■■□□□ 1.09
TNPO2-208ENST00000587654 GPBP1L1Q9HC44 474 aaPredicted RBP21.82■■□□□ 1.08
TNPO2-208ENST00000587654 PLEKHG2Q9H7P9 1386 aa21.82■■□□□ 1.08
TNPO2-208ENST00000587654 GNPATO15228 680 aa21.81■■□□□ 1.08
TNPO2-208ENST00000587654 PHKG2P15735 406 aa21.81■■□□□ 1.08
TNPO2-208ENST00000587654 ITPK1Q13572 414 aa21.81■■□□□ 1.08
TNPO2-208ENST00000587654 ASAP1Q9ULH1 1129 aa21.81■■□□□ 1.08
TNPO2-208ENST00000587654 KDRP35968 1356 aa21.81■■□□□ 1.08
TNPO2-208ENST00000587654 N4BP2Q86UW6 1770 aaPredicted RBP21.81■■□□□ 1.08
TNPO2-208ENST00000587654 WWC3Q9ULE0 1092 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms