RNA–Protein interactions for RNA: ENST00000587623.1

CTDP1-204, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 435 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-204ENST00000587623 CFAP53Q96M91 514 aa11.74□□□□□ -0.53
CTDP1-204ENST00000587623 PCDH11XQ9BZA7 1347 aa11.74□□□□□ -0.53
CTDP1-204ENST00000587623 PCDH11YQ9BZA8 1340 aa11.74□□□□□ -0.53
CTDP1-204ENST00000587623 BCL9O00512 1426 aa11.74□□□□□ -0.53
CTDP1-204ENST00000587623 PEAK1Q9H792 1746 aa11.74□□□□□ -0.53
CTDP1-204ENST00000587623 EZH2Q15910 746 aaKnown RBP11.73□□□□□ -0.53
CTDP1-204ENST00000587623 PLSCR1O15162 318 aa11.72□□□□□ -0.53
CTDP1-204ENST00000587623 CAMKK2Q96RR4 588 aa11.72□□□□□ -0.53
CTDP1-204ENST00000587623 RGPD2P0DJD1 1756 aa11.72□□□□□ -0.53
CTDP1-204ENST00000587623 MEGF6O75095 1541 aa11.71□□□□□ -0.53
CTDP1-204ENST00000587623 DIAPH1O60610 1272 aaKnown RBP11.71□□□□□ -0.53
CTDP1-204ENST00000587623 PLEKHO1Q53GL0 409 aaPredicted RBP11.71□□□□□ -0.53
CTDP1-204ENST00000587623 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.71□□□□□ -0.53
CTDP1-204ENST00000587623 KCNQ2O43526 872 aa11.7□□□□□ -0.54
CTDP1-204ENST00000587623 HMGB2P26583 209 aaKnown RBP11.7□□□□□ -0.54
CTDP1-204ENST00000587623 PRIM1P49642 420 aaKnown RBP11.7□□□□□ -0.54
CTDP1-204ENST00000587623 AMOTQ4VCS5 1084 aa11.7□□□□□ -0.54
CTDP1-204ENST00000587623 SULT6B1Q6IMI4 303 aa11.7□□□□□ -0.54
CTDP1-204ENST00000587623 NUDCQ9Y266 331 aa11.7□□□□□ -0.54
CTDP1-204ENST00000587623 IGSF1Q8N6C5 1336 aa11.69□□□□□ -0.54
CTDP1-204ENST00000587623 HSP90AB1P08238 724 aaKnown RBP11.69□□□□□ -0.54
CTDP1-204ENST00000587623 DDX10Q13206 875 aaKnown RBP11.69□□□□□ -0.54
CTDP1-204ENST00000587623 C1orf141Q5JVX7 400 aa11.69□□□□□ -0.54
CTDP1-204ENST00000587623 IFNL2Q8IZJ0 200 aa11.69□□□□□ -0.54
CTDP1-204ENST00000587623 TNS1Q9HBL0 1735 aaKnown RBP11.69□□□□□ -0.54
CTDP1-204ENST00000587623 U2SURPO15042 1029 aaKnown RBP11.68□□□□□ -0.54
CTDP1-204ENST00000587623 IL13P35225 146 aa11.68□□□□□ -0.54
CTDP1-204ENST00000587623 PLEKHG2Q9H7P9 1386 aa11.67□□□□□ -0.54
CTDP1-204ENST00000587623 SBF2Q86WG5 1849 aa11.67□□□□□ -0.54
CTDP1-204ENST00000587623 PSDA5PKW4 1024 aaPredicted RBP11.67□□□□□ -0.54
CTDP1-204ENST00000587623 R3HDM1Q15032 1099 aaKnown RBP11.67□□□□□ -0.54
CTDP1-204ENST00000587623 ZNF530Q6P9A1 599 aaPredicted RBP11.67□□□□□ -0.54
CTDP1-204ENST00000587623 STK32BQ9NY57 414 aa11.67□□□□□ -0.54
CTDP1-204ENST00000587623 CYP27B1O15528 508 aa11.66□□□□□ -0.54
CTDP1-204ENST00000587623 TXNRD1Q16881 649 aa11.66□□□□□ -0.54
CTDP1-204ENST00000587623 MPRIPQ6WCQ1 1025 aa11.66□□□□□ -0.54
CTDP1-204ENST00000587623 PTF1AQ7RTS3 328 aa11.66□□□□□ -0.54
CTDP1-204ENST00000587623 NCAPD2Q15021 1401 aa11.66□□□□□ -0.54
CTDP1-204ENST00000587623 NEFMP07197 916 aa11.65□□□□□ -0.54
CTDP1-204ENST00000587623 HMOX1P09601 288 aa11.65□□□□□ -0.54
CTDP1-204ENST00000587623 PPP2R1AP30153 589 aa11.65□□□□□ -0.54
CTDP1-204ENST00000587623 AEBP1Q8IUX7 1158 aa11.65□□□□□ -0.54
CTDP1-204ENST00000587623 SMARCC1Q92922 1105 aaPredicted RBP11.65□□□□□ -0.54
CTDP1-204ENST00000587623 TMOD3Q9NYL9 352 aa11.65□□□□□ -0.54
CTDP1-204ENST00000587623 NHSQ6T4R5 1651 aa11.65□□□□□ -0.55
CTDP1-204ENST00000587623 PHKG2P15735 406 aa11.64□□□□□ -0.55
CTDP1-204ENST00000587623 RALBP1Q15311 655 aa11.64□□□□□ -0.55
CTDP1-204ENST00000587623 SLC27A3Q5K4L6 730 aa11.64□□□□□ -0.55
CTDP1-204ENST00000587623 NKX1-1Q15270 411 aaPredicted RBP11.63□□□□□ -0.55
CTDP1-204ENST00000587623 DCAF5Q96JK2 942 aa11.63□□□□□ -0.55
CTDP1-204ENST00000587623 U2AF1L5P0DN76 240 aaPredicted RBP11.62□□□□□ -0.55
CTDP1-204ENST00000587623 CABP4P57796 275 aa11.62□□□□□ -0.55
CTDP1-204ENST00000587623 U2AF1Q01081 240 aaKnown RBP eCLIP11.62□□□□□ -0.55
CTDP1-204ENST00000587623 CCNL1Q9UK58 526 aaPredicted RBP11.62□□□□□ -0.55
CTDP1-204ENST00000587623 KDRP35968 1356 aa11.62□□□□□ -0.55
CTDP1-204ENST00000587623 BTAF1O14981 1849 aa11.62□□□□□ -0.55
CTDP1-204ENST00000587623 RGPD3A6NKT7 1758 aaPredicted RBP11.62□□□□□ -0.55
CTDP1-204ENST00000587623 RGPD4Q7Z3J3 1758 aa11.62□□□□□ -0.55
CTDP1-204ENST00000587623 PKD1L3Q7Z443 1732 aa11.61□□□□□ -0.55
CTDP1-204ENST00000587623 ERVV-2B6SEH9 535 aa11.61□□□□□ -0.55
CTDP1-204ENST00000587623 AKAP4Q5JQC9 854 aa11.61□□□□□ -0.55
CTDP1-204ENST00000587623 GAS2L2Q8NHY3 880 aa11.61□□□□□ -0.55
CTDP1-204ENST00000587623 DOT1LQ8TEK3 1739 aa11.6□□□□□ -0.55
CTDP1-204ENST00000587623 SLC15A2Q16348 729 aa11.6□□□□□ -0.55
CTDP1-204ENST00000587623 PROM2Q8N271 834 aa11.6□□□□□ -0.55
CTDP1-204ENST00000587623 PIGBQ92521 554 aa11.6□□□□□ -0.55
CTDP1-204ENST00000587623 PNNQ9H307 717 aaKnown RBP11.6□□□□□ -0.55
CTDP1-204ENST00000587623 SHANK3Q9BYB0 1731 aa11.6□□□□□ -0.55
CTDP1-204ENST00000587623 RREB1Q92766 1687 aa11.59□□□□□ -0.55
CTDP1-204ENST00000587623 PALLDQ8WX93 1383 aa11.59□□□□□ -0.55
CTDP1-204ENST00000587623 ZNF316A6NFI3 1004 aaPredicted RBP11.59□□□□□ -0.55
CTDP1-204ENST00000587623 TFCP2L1Q9NZI6 479 aa11.59□□□□□ -0.55
CTDP1-204ENST00000587623 NUP188Q5SRE5 1749 aa11.58□□□□□ -0.56
CTDP1-204ENST00000587623 MYBBP1AQ9BQG0 1328 aaKnown RBP11.58□□□□□ -0.56
CTDP1-204ENST00000587623 MSH5O43196 834 aa11.57□□□□□ -0.56
CTDP1-204ENST00000587623 FCHSD2O94868 740 aa11.57□□□□□ -0.56
CTDP1-204ENST00000587623 PRKAR2BP31323 418 aa11.57□□□□□ -0.56
CTDP1-204ENST00000587623 POTEDQ86YR6 584 aa11.57□□□□□ -0.56
CTDP1-204ENST00000587623 RTF1Q92541 710 aaKnown RBP11.57□□□□□ -0.56
CTDP1-204ENST00000587623 RBM42Q9BTD8 480 aaKnown RBP11.57□□□□□ -0.56
CTDP1-204ENST00000587623 SPON1Q9HCB6 807 aa11.57□□□□□ -0.56
CTDP1-204ENST00000587623 ANO8Q9HCE9 1232 aaPredicted RBP11.57□□□□□ -0.56
CTDP1-204ENST00000587623 PPP1R1BQ9UD71 204 aaPredicted RBP11.57□□□□□ -0.56
CTDP1-204ENST00000587623 TEFQ10587 303 aa11.56□□□□□ -0.56
CTDP1-204ENST00000587623 MTHFSDQ2M296 383 aaKnown RBP11.56□□□□□ -0.56
CTDP1-204ENST00000587623 AK7Q96M32 723 aa11.56□□□□□ -0.56
CTDP1-204ENST00000587623 LRRC4BQ9NT99 713 aa11.56□□□□□ -0.56
CTDP1-204ENST00000587623 COL3A1P02461 1466 aaPredicted RBP11.56□□□□□ -0.56
CTDP1-204ENST00000587623 MAPK8IP3Q9UPT6 1336 aa11.56□□□□□ -0.56
CTDP1-204ENST00000587623 LOC102724428A0A0B4J2F2 783 aa11.55□□□□□ -0.56
CTDP1-204ENST00000587623 GNAT3A8MTJ3 354 aa11.55□□□□□ -0.56
CTDP1-204ENST00000587623 ATP6V1AP38606 617 aa11.55□□□□□ -0.56
CTDP1-204ENST00000587623 KCNQ4P56696 695 aa11.55□□□□□ -0.56
CTDP1-204ENST00000587623 SIK1P57059 783 aa11.55□□□□□ -0.56
CTDP1-204ENST00000587623 NFATC2IPQ8NCF5 419 aa11.55□□□□□ -0.56
CTDP1-204ENST00000587623 ASAP1Q9ULH1 1129 aa11.55□□□□□ -0.56
CTDP1-204ENST00000587623 ITGB4P16144 1822 aa11.54□□□□□ -0.56
CTDP1-204ENST00000587623 RNMTO43148 476 aaKnown RBP11.54□□□□□ -0.56
CTDP1-204ENST00000587623 WDR43Q15061 677 aaKnown RBP eCLIP11.54□□□□□ -0.56
CTDP1-204ENST00000587623 FLAD1Q8NFF5 587 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms