RNA–Protein interactions for RNA: ENST00000587600.1

LDLRAD4-210, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 3

Gene LDLRAD4, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-210ENST00000587600 DISP2A7MBM2 1401 aa17.57■□□□□ 0.4
LDLRAD4-210ENST00000587600 CCDC146Q8IYE0 955 aa17.57■□□□□ 0.4
LDLRAD4-210ENST00000587600 CCDC9Q9Y3X0 531 aaKnown RBP17.57■□□□□ 0.4
LDLRAD4-210ENST00000587600 RGPD2P0DJD1 1756 aa17.56■□□□□ 0.4
LDLRAD4-210ENST00000587600 PARP4Q9UKK3 1724 aaKnown RBP17.56■□□□□ 0.4
LDLRAD4-210ENST00000587600 LMOD3Q0VAK6 560 aa17.56■□□□□ 0.4
LDLRAD4-210ENST00000587600 NFE2L2Q16236 605 aa17.56■□□□□ 0.4
LDLRAD4-210ENST00000587600 CCDC27Q2M243 656 aa17.56■□□□□ 0.4
LDLRAD4-210ENST00000587600 GJD4Q96KN9 370 aaPredicted RBP17.56■□□□□ 0.4
LDLRAD4-210ENST00000587600 PHACTR3Q96KR7 559 aa17.56■□□□□ 0.4
LDLRAD4-210ENST00000587600 MEGF6O75095 1541 aa17.56■□□□□ 0.4
LDLRAD4-210ENST00000587600 APAF1O14727 1248 aa17.55■□□□□ 0.4
LDLRAD4-210ENST00000587600 HTATSF1O43719 755 aaKnown RBP17.55■□□□□ 0.4
LDLRAD4-210ENST00000587600 TMPOP42166 694 aaKnown RBP17.55■□□□□ 0.4
LDLRAD4-210ENST00000587600 USP35Q9P2H5 1018 aa17.55■□□□□ 0.4
LDLRAD4-210ENST00000587600 HNRNPUQ00839 825 aaKnown RBP eCLIP17.54■□□□□ 0.4
LDLRAD4-210ENST00000587600 PCDH11XQ9BZA7 1347 aa17.53■□□□□ 0.4
LDLRAD4-210ENST00000587600 PCDH11YQ9BZA8 1340 aa17.53■□□□□ 0.4
LDLRAD4-210ENST00000587600 MTHFSDQ2M296 383 aaKnown RBP17.53■□□□□ 0.4
LDLRAD4-210ENST00000587600 QTRT2Q9H974 415 aaKnown RBP17.53■□□□□ 0.4
LDLRAD4-210ENST00000587600 SOCS7O14512 581 aa17.52■□□□□ 0.4
LDLRAD4-210ENST00000587600 ONECUT3O60422 494 aaPredicted RBP17.52■□□□□ 0.4
LDLRAD4-210ENST00000587600 ZCRB1Q8TBF4 217 aaKnown RBP17.52■□□□□ 0.4
LDLRAD4-210ENST00000587600 PKD1L3Q7Z443 1732 aa17.52■□□□□ 0.39
LDLRAD4-210ENST00000587600 ZBED9Q6R2W3 1325 aa17.51■□□□□ 0.39
LDLRAD4-210ENST00000587600 HSP90AB1P08238 724 aaKnown RBP17.51■□□□□ 0.39
LDLRAD4-210ENST00000587600 RIPK4P57078 832 aa17.51■□□□□ 0.39
LDLRAD4-210ENST00000587600 AKAP4Q5JQC9 854 aa17.51■□□□□ 0.39
LDLRAD4-210ENST00000587600 C1orf141Q5JVX7 400 aa17.51■□□□□ 0.39
LDLRAD4-210ENST00000587600 TNS2Q63HR2 1409 aa17.5■□□□□ 0.39
LDLRAD4-210ENST00000587600 WNK3Q9BYP7 1800 aa17.5■□□□□ 0.39
LDLRAD4-210ENST00000587600 GNAT3A8MTJ3 354 aa17.5■□□□□ 0.39
LDLRAD4-210ENST00000587600 EXOC5O00471 708 aa17.5■□□□□ 0.39
LDLRAD4-210ENST00000587600 RBM6P78332 1123 aaKnown RBP17.5■□□□□ 0.39
LDLRAD4-210ENST00000587600 CALD1Q05682 793 aaKnown RBP17.5■□□□□ 0.39
LDLRAD4-210ENST00000587600 IFNL2Q8IZJ0 200 aa17.5■□□□□ 0.39
LDLRAD4-210ENST00000587600 MAP3K5Q99683 1374 aa17.5■□□□□ 0.39
LDLRAD4-210ENST00000587600 GLI3P10071 1580 aa17.49■□□□□ 0.39
LDLRAD4-210ENST00000587600 DDB1Q16531 1140 aa17.49■□□□□ 0.39
LDLRAD4-210ENST00000587600 ZNF530Q6P9A1 599 aaPredicted RBP17.49■□□□□ 0.39
LDLRAD4-210ENST00000587600 RTF1Q92541 710 aaKnown RBP17.49■□□□□ 0.39
LDLRAD4-210ENST00000587600 PHKG2P15735 406 aa17.47■□□□□ 0.39
LDLRAD4-210ENST00000587600 PDE3BQ13370 1112 aa17.47■□□□□ 0.39
LDLRAD4-210ENST00000587600 FAM98CQ17RN3 349 aaKnown RBP17.47■□□□□ 0.39
LDLRAD4-210ENST00000587600 WDR63Q8IWG1 891 aa17.47■□□□□ 0.39
LDLRAD4-210ENST00000587600 THSD7AQ9UPZ6 1657 aa17.47■□□□□ 0.39
LDLRAD4-210ENST00000587600 NKX1-1Q15270 411 aaPredicted RBP17.46■□□□□ 0.39
LDLRAD4-210ENST00000587600 NEUROD2Q15784 382 aa17.46■□□□□ 0.39
LDLRAD4-210ENST00000587600 WWC1Q8IX03 1113 aa17.46■□□□□ 0.39
LDLRAD4-210ENST00000587600 DCAF5Q96JK2 942 aa17.46■□□□□ 0.39
LDLRAD4-210ENST00000587600 TRIM35Q9UPQ4 493 aa17.46■□□□□ 0.39
LDLRAD4-210ENST00000587600 RRP7AQ9Y3A4 280 aaKnown RBP17.46■□□□□ 0.39
LDLRAD4-210ENST00000587600 ZNF521Q96K83 1311 aa17.46■□□□□ 0.38
LDLRAD4-210ENST00000587600 LRRC37A3O60309 1634 aa17.45■□□□□ 0.38
LDLRAD4-210ENST00000587600 IL16Q14005 1332 aa17.45■□□□□ 0.38
LDLRAD4-210ENST00000587600 CYP27B1O15528 508 aa17.44■□□□□ 0.38
LDLRAD4-210ENST00000587600 RXRBP28702 533 aa17.44■□□□□ 0.38
LDLRAD4-210ENST00000587600 YTHDC1Q96MU7 727 aaKnown RBP17.44■□□□□ 0.38
LDLRAD4-210ENST00000587600 CEMIPQ8WUJ3 1361 aa17.43■□□□□ 0.38
LDLRAD4-210ENST00000587600 GOLGA2Q08379 1002 aa17.42■□□□□ 0.38
LDLRAD4-210ENST00000587600 BABAM1Q9NWV8 329 aa17.42■□□□□ 0.38
LDLRAD4-210ENST00000587600 RGS17Q9UGC6 210 aaPredicted RBP17.42■□□□□ 0.38
LDLRAD4-210ENST00000587600 ADAMTS7Q9UKP4 1686 aa17.42■□□□□ 0.38
LDLRAD4-210ENST00000587600 BCL9O00512 1426 aa17.41■□□□□ 0.38
LDLRAD4-210ENST00000587600 A0A0G2JS52 829 aa17.41■□□□□ 0.38
LDLRAD4-210ENST00000587600 MYT1Q01538 1121 aa17.41■□□□□ 0.38
LDLRAD4-210ENST00000587600 SEPT12Q8IYM1 358 aa17.41■□□□□ 0.38
LDLRAD4-210ENST00000587600 DDX54Q8TDD1 881 aaKnown RBP17.41■□□□□ 0.38
LDLRAD4-210ENST00000587600 ERVV-2B6SEH9 535 aa17.4■□□□□ 0.38
LDLRAD4-210ENST00000587600 SALL2Q9Y467 1007 aaPredicted RBP17.4■□□□□ 0.38
LDLRAD4-210ENST00000587600 SHANK3Q9BYB0 1731 aa17.4■□□□□ 0.38
LDLRAD4-210ENST00000587600 E9PSI1 815 aa17.39■□□□□ 0.37
LDLRAD4-210ENST00000587600 RNMTO43148 476 aaKnown RBP17.39■□□□□ 0.37
LDLRAD4-210ENST00000587600 GNAI1P63096 354 aa17.39■□□□□ 0.37
LDLRAD4-210ENST00000587600 MPRIPQ6WCQ1 1025 aa17.39■□□□□ 0.37
LDLRAD4-210ENST00000587600 IL17REQ8NFR9 667 aa17.39■□□□□ 0.37
LDLRAD4-210ENST00000587600 MYH16Q9H6N6 1097 aa17.39■□□□□ 0.37
LDLRAD4-210ENST00000587600 IFT57Q9NWB7 429 aa17.39■□□□□ 0.37
LDLRAD4-210ENST00000587600 KDM6AO15550 1401 aaPredicted RBP17.38■□□□□ 0.37
LDLRAD4-210ENST00000587600 MRC1P22897 1456 aa17.38■□□□□ 0.37
LDLRAD4-210ENST00000587600 TEFQ10587 303 aa17.38■□□□□ 0.37
LDLRAD4-210ENST00000587600 MCM10Q7L590 875 aa17.38■□□□□ 0.37
LDLRAD4-210ENST00000587600 CFAP44Q96MT7 982 aa17.38■□□□□ 0.37
LDLRAD4-210ENST00000587600 DLG5Q8TDM6 1919 aa17.37■□□□□ 0.37
LDLRAD4-210ENST00000587600 TAF7Q15545 349 aaPredicted RBP17.36■□□□□ 0.37
LDLRAD4-210ENST00000587600 POTEAQ6S8J7 498 aa17.36■□□□□ 0.37
LDLRAD4-210ENST00000587600 MARCH10Q8NA82 808 aaPredicted RBP17.36■□□□□ 0.37
LDLRAD4-210ENST00000587600 SLC52A2Q9HAB3 445 aa17.36■□□□□ 0.37
LDLRAD4-210ENST00000587600 ZNF853P0CG23 659 aa17.35■□□□□ 0.37
LDLRAD4-210ENST00000587600 SLFN5Q08AF3 891 aa17.35■□□□□ 0.37
LDLRAD4-210ENST00000587600 DCTN1Q14203 1278 aa17.35■□□□□ 0.37
LDLRAD4-210ENST00000587600 KRT27Q7Z3Y8 459 aa17.35■□□□□ 0.37
LDLRAD4-210ENST00000587600 LGR6Q9HBX8 967 aa17.35■□□□□ 0.37
LDLRAD4-210ENST00000587600 CABP4P57796 275 aa17.34■□□□□ 0.37
LDLRAD4-210ENST00000587600 SCN11AQ9UI33 1791 aa17.34■□□□□ 0.37
LDLRAD4-210ENST00000587600 RGS12O14924 1447 aa17.33■□□□□ 0.36
LDLRAD4-210ENST00000587600 SENP3-EIF4A1A0A087X0R7 540 aa17.33■□□□□ 0.36
LDLRAD4-210ENST00000587600 CHL1O00533 1208 aa17.33■□□□□ 0.36
LDLRAD4-210ENST00000587600 TRMT2AQ8IZ69 625 aaKnown RBP17.33■□□□□ 0.36
LDLRAD4-210ENST00000587600 THUMPD2Q9BTF0 503 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms