RNA–Protein interactions for RNA: ENST00000587564.2

SPRED3-205, Transcript of sprouty related EVH1 domain containing 3, humanhuman

TSL 1 (best)

Gene SPRED3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED3-205ENST00000587564 TIMELESSQ9UNS1 1208 aa29.77■■■□□ 2.36
SPRED3-205ENST00000587564 RGPD2P0DJD1 1756 aa29.76■■■□□ 2.35
SPRED3-205ENST00000587564 MAP3K5Q99683 1374 aa29.76■■■□□ 2.35
SPRED3-205ENST00000587564 QSER1Q2KHR3 1735 aa29.75■■■□□ 2.35
SPRED3-205ENST00000587564 SHANK3Q9BYB0 1731 aa29.75■■■□□ 2.35
SPRED3-205ENST00000587564 SMG6Q86US8 1419 aaKnown RBP29.74■■■□□ 2.35
SPRED3-205ENST00000587564 TMF1P82094 1093 aa29.74■■■□□ 2.35
SPRED3-205ENST00000587564 RRS1Q15050 365 aaKnown RBP29.74■■■□□ 2.35
SPRED3-205ENST00000587564 SLC16A10Q8TF71 515 aa29.73■■■□□ 2.35
SPRED3-205ENST00000587564 GGNBP2Q9H3C7 697 aa29.73■■■□□ 2.35
SPRED3-205ENST00000587564 NSD2O96028 1365 aa29.73■■■□□ 2.35
SPRED3-205ENST00000587564 KCNQ4P56696 695 aa29.72■■■□□ 2.35
SPRED3-205ENST00000587564 TFCP2L1Q9NZI6 479 aa29.72■■■□□ 2.35
SPRED3-205ENST00000587564 PNPLA7Q6ZV29 1317 aa29.71■■■□□ 2.35
SPRED3-205ENST00000587564 POLD1P28340 1107 aa29.71■■■□□ 2.35
SPRED3-205ENST00000587564 KLHL34Q8N239 644 aa29.71■■■□□ 2.35
SPRED3-205ENST00000587564 LY75O60449 1722 aa29.71■■■□□ 2.35
SPRED3-205ENST00000587564 FYB1O15117 783 aa29.7■■■□□ 2.35
SPRED3-205ENST00000587564 NBPF6Q5VWK0 638 aa29.69■■■□□ 2.34
SPRED3-205ENST00000587564 USHBP1Q8N6Y0 703 aa29.69■■■□□ 2.34
SPRED3-205ENST00000587564 ZNF784Q8NCA9 323 aaPredicted RBP29.69■■■□□ 2.34
SPRED3-205ENST00000587564 NBPF4Q96M43 638 aa29.69■■■□□ 2.34
SPRED3-205ENST00000587564 RAPGEF4Q8WZA2 1011 aa29.68■■■□□ 2.34
SPRED3-205ENST00000587564 TUBGCP6Q96RT7 1819 aa29.68■■■□□ 2.34
SPRED3-205ENST00000587564 CGNL1Q0VF96 1302 aa29.68■■■□□ 2.34
SPRED3-205ENST00000587564 CCNL1Q9UK58 526 aaPredicted RBP29.67■■■□□ 2.34
SPRED3-205ENST00000587564 CCER1Q8TC90 406 aaPredicted RBP29.66■■■□□ 2.34
SPRED3-205ENST00000587564 KIF20BQ96Q89 1820 aa29.66■■■□□ 2.34
SPRED3-205ENST00000587564 GPR162Q16538 588 aa29.64■■■□□ 2.34
SPRED3-205ENST00000587564 CDCA8Q53HL2 280 aa29.64■■■□□ 2.34
SPRED3-205ENST00000587564 COL24A1Q17RW2 1714 aa29.63■■■□□ 2.33
SPRED3-205ENST00000587564 TATP17735 454 aaPredicted RBP29.63■■■□□ 2.33
SPRED3-205ENST00000587564 INSRP06213 1382 aa29.63■■■□□ 2.33
SPRED3-205ENST00000587564 FLT4P35916 1363 aa29.63■■■□□ 2.33
SPRED3-205ENST00000587564 CHD4Q14839 1912 aa29.62■■■□□ 2.33
SPRED3-205ENST00000587564 HSP90AB2PQ58FF8 381 aa29.61■■■□□ 2.33
SPRED3-205ENST00000587564 UTRNP46939 3433 aa29.61■■■□□ 2.33
SPRED3-205ENST00000587564 PCDH11XQ9BZA7 1347 aa29.6■■■□□ 2.33
SPRED3-205ENST00000587564 PCDH11YQ9BZA8 1340 aa29.6■■■□□ 2.33
SPRED3-205ENST00000587564 KIF24Q5T7B8 1368 aa29.6■■■□□ 2.33
SPRED3-205ENST00000587564 MSH5O43196 834 aa29.59■■■□□ 2.33
SPRED3-205ENST00000587564 PELP1Q8IZL8 1130 aaKnown RBP29.59■■■□□ 2.33
SPRED3-205ENST00000587564 NSD3Q9BZ95 1437 aa29.54■■■□□ 2.32
SPRED3-205ENST00000587564 C5P01031 1676 aa29.54■■■□□ 2.32
SPRED3-205ENST00000587564 COL23A1Q86Y22 540 aaPredicted RBP29.54■■■□□ 2.32
SPRED3-205ENST00000587564 NLGN2Q8NFZ4 835 aa29.54■■■□□ 2.32
SPRED3-205ENST00000587564 PALLDQ8WX93 1383 aa29.52■■■□□ 2.32
SPRED3-205ENST00000587564 MPRIPQ6WCQ1 1025 aa29.51■■■□□ 2.31
SPRED3-205ENST00000587564 EMILIN1Q9Y6C2 1016 aa29.51■■■□□ 2.31
SPRED3-205ENST00000587564 CARD14Q9BXL6 1004 aa29.5■■■□□ 2.31
SPRED3-205ENST00000587564 HMGB2P26583 209 aaKnown RBP29.49■■■□□ 2.31
SPRED3-205ENST00000587564 MSL1Q68DK7 614 aa29.49■■■□□ 2.31
SPRED3-205ENST00000587564 TOGARAM1Q9Y4F4 1720 aa29.48■■■□□ 2.31
SPRED3-205ENST00000587564 PPM1GO15355 546 aaPredicted RBP29.48■■■□□ 2.31
SPRED3-205ENST00000587564 CYP27B1O15528 508 aa29.48■■■□□ 2.31
SPRED3-205ENST00000587564 PKD1L3Q7Z443 1732 aa29.48■■■□□ 2.31
SPRED3-205ENST00000587564 HSPA5P11021 654 aaKnown RBP29.45■■■□□ 2.31
SPRED3-205ENST00000587564 FLAD1Q8NFF5 587 aa29.45■■■□□ 2.31
SPRED3-205ENST00000587564 SMARCC1Q92922 1105 aaPredicted RBP29.44■■■□□ 2.3
SPRED3-205ENST00000587564 ANKRD26Q9UPS8 1709 aa29.44■■■□□ 2.3
SPRED3-205ENST00000587564 NCAPD2Q15021 1401 aa29.44■■■□□ 2.3
SPRED3-205ENST00000587564 TAF1LQ8IZX4 1826 aa29.43■■■□□ 2.3
SPRED3-205ENST00000587564 POLR3GLQ9BT43 218 aa29.43■■■□□ 2.3
SPRED3-205ENST00000587564 C1QTNF8P60827 252 aa29.42■■■□□ 2.3
SPRED3-205ENST00000587564 EIF4G2P78344 907 aaKnown RBP eCLIP29.42■■■□□ 2.3
SPRED3-205ENST00000587564 AK7Q96M32 723 aa29.42■■■□□ 2.3
SPRED3-205ENST00000587564 SPG7Q9UQ90 795 aa29.42■■■□□ 2.3
SPRED3-205ENST00000587564 C4BP0C0L5 1744 aa29.42■■■□□ 2.3
SPRED3-205ENST00000587564 ITGB4P16144 1822 aa29.41■■■□□ 2.3
SPRED3-205ENST00000587564 SENP3-EIF4A1A0A087X0R7 540 aa29.41■■■□□ 2.3
SPRED3-205ENST00000587564 GRIN3BO60391 1043 aa29.4■■■□□ 2.3
SPRED3-205ENST00000587564 YBX3P16989 372 aaKnown RBP eCLIP29.4■■■□□ 2.3
SPRED3-205ENST00000587564 WASHC2AQ641Q2 1341 aa29.39■■■□□ 2.3
SPRED3-205ENST00000587564 PIGBQ92521 554 aa29.38■■■□□ 2.29
SPRED3-205ENST00000587564 GIGYF1O75420 1035 aaPredicted RBP29.37■■■□□ 2.29
SPRED3-205ENST00000587564 GOLGB1Q14789 3259 aaKnown RBP29.36■■■□□ 2.29
SPRED3-205ENST00000587564 NKX1-1Q15270 411 aaPredicted RBP29.36■■■□□ 2.29
SPRED3-205ENST00000587564 EYA1Q99502 592 aa29.36■■■□□ 2.29
SPRED3-205ENST00000587564 CD2APQ9Y5K6 639 aa29.36■■■□□ 2.29
SPRED3-205ENST00000587564 PHF14O94880 888 aa29.35■■■□□ 2.29
SPRED3-205ENST00000587564 TMOD3Q9NYL9 352 aa29.34■■■□□ 2.29
SPRED3-205ENST00000587564 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.33■■■□□ 2.29
SPRED3-205ENST00000587564 AMIGO3Q86WK7 504 aa29.32■■■□□ 2.28
SPRED3-205ENST00000587564 POLKQ9UBT6 870 aa29.32■■■□□ 2.28
SPRED3-205ENST00000587564 UBR3Q6ZT12 1888 aa29.31■■■□□ 2.28
SPRED3-205ENST00000587564 MAP2P11137 1827 aaKnown RBP29.31■■■□□ 2.28
SPRED3-205ENST00000587564 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.31■■■□□ 2.28
SPRED3-205ENST00000587564 LOC102724428A0A0B4J2F2 783 aa29.31■■■□□ 2.28
SPRED3-205ENST00000587564 SIK1P57059 783 aa29.31■■■□□ 2.28
SPRED3-205ENST00000587564 IFNL2Q8IZJ0 200 aa29.3■■■□□ 2.28
SPRED3-205ENST00000587564 PHKG2P15735 406 aa29.29■■■□□ 2.28
SPRED3-205ENST00000587564 LINC00116Q8NCU8 138 aa29.29■■■□□ 2.28
SPRED3-205ENST00000587564 SSFA2P28290 1259 aa29.28■■■□□ 2.28
SPRED3-205ENST00000587564 TNNT2P45379 298 aaPredicted RBP29.28■■■□□ 2.28
SPRED3-205ENST00000587564 SMIM5Q71RC9 77 aa29.28■■■□□ 2.28
SPRED3-205ENST00000587564 EIF4A2Q14240 407 aaKnown RBP29.26■■■□□ 2.27
SPRED3-205ENST00000587564 ASAP1Q9ULH1 1129 aa29.26■■■□□ 2.27
SPRED3-205ENST00000587564 GNPATO15228 680 aa29.24■■■□□ 2.27
SPRED3-205ENST00000587564 ATP6V1AP38606 617 aa29.24■■■□□ 2.27
SPRED3-205ENST00000587564 PANK3Q9H999 370 aa29.24■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms