RNA–Protein interactions for RNA: ENST00000587560.5

H3F3B-206, Transcript of H3 histone family member 3B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene H3F3B, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-206ENST00000587560 SF3B2Q13435 895 aaKnown RBP24.35■■□□□ 1.49
H3F3B-206ENST00000587560 MEGF6O75095 1541 aa24.35■■□□□ 1.49
H3F3B-206ENST00000587560 HMOX1P09601 288 aa24.34■■□□□ 1.49
H3F3B-206ENST00000587560 PKD1L3Q7Z443 1732 aa24.34■■□□□ 1.49
H3F3B-206ENST00000587560 PARP4Q9UKK3 1724 aaKnown RBP24.34■■□□□ 1.49
H3F3B-206ENST00000587560 FAM9BQ8IZU0 186 aa24.33■■□□□ 1.49
H3F3B-206ENST00000587560 GJD4Q96KN9 370 aaPredicted RBP24.32■■□□□ 1.48
H3F3B-206ENST00000587560 THRAP3Q9Y2W1 955 aaKnown RBP24.32■■□□□ 1.48
H3F3B-206ENST00000587560 BARGINQ6ZT62 677 aa24.31■■□□□ 1.48
H3F3B-206ENST00000587560 SHANK3Q9BYB0 1731 aa24.31■■□□□ 1.48
H3F3B-206ENST00000587560 THSD7AQ9UPZ6 1657 aa24.3■■□□□ 1.48
H3F3B-206ENST00000587560 OVOS2A0A0G2JMS6 1433 aa24.3■■□□□ 1.48
H3F3B-206ENST00000587560 PRKAR2BP31323 418 aa24.3■■□□□ 1.48
H3F3B-206ENST00000587560 TCP11L2Q8N4U5 519 aa24.3■■□□□ 1.48
H3F3B-206ENST00000587560 RUNDC1Q96C34 613 aa24.28■■□□□ 1.48
H3F3B-206ENST00000587560 PHACTR3Q96KR7 559 aa24.28■■□□□ 1.48
H3F3B-206ENST00000587560 PNNQ9H307 717 aaKnown RBP24.27■■□□□ 1.48
H3F3B-206ENST00000587560 DLG5Q8TDM6 1919 aa24.26■■□□□ 1.47
H3F3B-206ENST00000587560 ONECUT3O60422 494 aaPredicted RBP24.26■■□□□ 1.47
H3F3B-206ENST00000587560 LRRC37A3O60309 1634 aa24.25■■□□□ 1.47
H3F3B-206ENST00000587560 IL2RBP14784 551 aa24.25■■□□□ 1.47
H3F3B-206ENST00000587560 R3HDM1Q15032 1099 aaKnown RBP24.25■■□□□ 1.47
H3F3B-206ENST00000587560 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.25■■□□□ 1.47
H3F3B-206ENST00000587560 CCDC146Q8IYE0 955 aa24.24■■□□□ 1.47
H3F3B-206ENST00000587560 RAPGEF4Q8WZA2 1011 aa24.23■■□□□ 1.47
H3F3B-206ENST00000587560 CDCA7Q9BWT1 371 aaPredicted RBP24.23■■□□□ 1.47
H3F3B-206ENST00000587560 USP35Q9P2H5 1018 aa24.23■■□□□ 1.47
H3F3B-206ENST00000587560 TATP17735 454 aaPredicted RBP24.22■■□□□ 1.47
H3F3B-206ENST00000587560 NCBP3Q53F19 620 aaKnown RBP24.21■■□□□ 1.47
H3F3B-206ENST00000587560 CEP350Q5VT06 3117 aa24.21■■□□□ 1.47
H3F3B-206ENST00000587560 ADAMTS7Q9UKP4 1686 aa24.21■■□□□ 1.47
H3F3B-206ENST00000587560 MTHFSDQ2M296 383 aaKnown RBP24.2■■□□□ 1.46
H3F3B-206ENST00000587560 AMOTQ4VCS5 1084 aa24.2■■□□□ 1.46
H3F3B-206ENST00000587560 CCDC9Q9Y3X0 531 aaKnown RBP24.2■■□□□ 1.46
H3F3B-206ENST00000587560 TNS2Q63HR2 1409 aa24.19■■□□□ 1.46
H3F3B-206ENST00000587560 APAF1O14727 1248 aa24.18■■□□□ 1.46
H3F3B-206ENST00000587560 BAG6P46379 1132 aa24.18■■□□□ 1.46
H3F3B-206ENST00000587560 NFE2L2Q16236 605 aa24.18■■□□□ 1.46
H3F3B-206ENST00000587560 PLEKHO1Q53GL0 409 aaPredicted RBP24.18■■□□□ 1.46
H3F3B-206ENST00000587560 VIRMAQ69YN4 1812 aaKnown RBP24.18■■□□□ 1.46
H3F3B-206ENST00000587560 MAPK8IP3Q9UPT6 1336 aa24.17■■□□□ 1.46
H3F3B-206ENST00000587560 TMPOP42166 694 aaKnown RBP24.17■■□□□ 1.46
H3F3B-206ENST00000587560 FAM98CQ17RN3 349 aaKnown RBP24.17■■□□□ 1.46
H3F3B-206ENST00000587560 ZNF784Q8NCA9 323 aaPredicted RBP24.17■■□□□ 1.46
H3F3B-206ENST00000587560 GAS2L2Q8NHY3 880 aa24.16■■□□□ 1.46
H3F3B-206ENST00000587560 ZCRB1Q8TBF4 217 aaKnown RBP24.16■■□□□ 1.46
H3F3B-206ENST00000587560 C1QTNF8P60827 252 aa24.15■■□□□ 1.46
H3F3B-206ENST00000587560 SPG7Q9UQ90 795 aa24.15■■□□□ 1.46
H3F3B-206ENST00000587560 CYP27B1O15528 508 aa24.14■■□□□ 1.45
H3F3B-206ENST00000587560 SCN11AQ9UI33 1791 aa24.13■■□□□ 1.45
H3F3B-206ENST00000587560 UTRNP46939 3433 aa24.12■■□□□ 1.45
H3F3B-206ENST00000587560 CCDC27Q2M243 656 aa24.12■■□□□ 1.45
H3F3B-206ENST00000587560 NGEFQ8N5V2 710 aa24.12■■□□□ 1.45
H3F3B-206ENST00000587560 TRIM35Q9UPQ4 493 aa24.12■■□□□ 1.45
H3F3B-206ENST00000587560 PCDH11XQ9BZA7 1347 aa24.11■■□□□ 1.45
H3F3B-206ENST00000587560 PCDH11YQ9BZA8 1340 aa24.11■■□□□ 1.45
H3F3B-206ENST00000587560 NEFMP07197 916 aa24.11■■□□□ 1.45
H3F3B-206ENST00000587560 PHKG2P15735 406 aa24.11■■□□□ 1.45
H3F3B-206ENST00000587560 NKX1-1Q15270 411 aaPredicted RBP24.11■■□□□ 1.45
H3F3B-206ENST00000587560 ZNF530Q6P9A1 599 aaPredicted RBP24.11■■□□□ 1.45
H3F3B-206ENST00000587560 SEPT12Q8IYM1 358 aa24.11■■□□□ 1.45
H3F3B-206ENST00000587560 ZNF521Q96K83 1311 aa24.1■■□□□ 1.45
H3F3B-206ENST00000587560 EXOC5O00471 708 aa24.1■■□□□ 1.45
H3F3B-206ENST00000587560 HTATSF1O43719 755 aaKnown RBP24.1■■□□□ 1.45
H3F3B-206ENST00000587560 EN1Q05925 392 aaPredicted RBP24.1■■□□□ 1.45
H3F3B-206ENST00000587560 DDB1Q16531 1140 aa24.1■■□□□ 1.45
H3F3B-206ENST00000587560 AKAP4Q5JQC9 854 aa24.1■■□□□ 1.45
H3F3B-206ENST00000587560 RRP7AQ9Y3A4 280 aaKnown RBP24.1■■□□□ 1.45
H3F3B-206ENST00000587560 MAP3K5Q99683 1374 aa24.1■■□□□ 1.45
H3F3B-206ENST00000587560 RIPK4P57078 832 aa24.09■■□□□ 1.45
H3F3B-206ENST00000587560 IFNL2Q8IZJ0 200 aa24.09■■□□□ 1.45
H3F3B-206ENST00000587560 TOGARAM1Q9Y4F4 1720 aa24.09■■□□□ 1.45
H3F3B-206ENST00000587560 KDM6AO15550 1401 aaPredicted RBP24.09■■□□□ 1.45
H3F3B-206ENST00000587560 CEMIPQ8WUJ3 1361 aa24.08■■□□□ 1.45
H3F3B-206ENST00000587560 SIPA1L3O60292 1781 aaPredicted RBP24.08■■□□□ 1.44
H3F3B-206ENST00000587560 GNAT3A8MTJ3 354 aa24.07■■□□□ 1.44
H3F3B-206ENST00000587560 BCL9O00512 1426 aa24.07■■□□□ 1.44
H3F3B-206ENST00000587560 MARCH10Q8NA82 808 aaPredicted RBP24.06■■□□□ 1.44
H3F3B-206ENST00000587560 MRC1P22897 1456 aa24.06■■□□□ 1.44
H3F3B-206ENST00000587560 DCAF8L1A6NGE4 600 aa24.05■■□□□ 1.44
H3F3B-206ENST00000587560 KRT27Q7Z3Y8 459 aa24.05■■□□□ 1.44
H3F3B-206ENST00000587560 IL17REQ8NFR9 667 aa24.05■■□□□ 1.44
H3F3B-206ENST00000587560 TNS1Q9HBL0 1735 aaKnown RBP24.04■■□□□ 1.44
H3F3B-206ENST00000587560 HNRNPUQ00839 825 aaKnown RBP eCLIP24.04■■□□□ 1.44
H3F3B-206ENST00000587560 WWC1Q8IX03 1113 aa24.04■■□□□ 1.44
H3F3B-206ENST00000587560 NEUROD2Q15784 382 aa24.03■■□□□ 1.44
H3F3B-206ENST00000587560 C1orf141Q5JVX7 400 aa24.03■■□□□ 1.44
H3F3B-206ENST00000587560 LMOD3Q0VAK6 560 aa24.02■■□□□ 1.44
H3F3B-206ENST00000587560 DDX54Q8TDD1 881 aaKnown RBP24.02■■□□□ 1.44
H3F3B-206ENST00000587560 DCAF5Q96JK2 942 aa24.02■■□□□ 1.44
H3F3B-206ENST00000587560 ITGB4P16144 1822 aa24.02■■□□□ 1.44
H3F3B-206ENST00000587560 SBF2Q86WG5 1849 aa24.02■■□□□ 1.44
H3F3B-206ENST00000587560 ZBED9Q6R2W3 1325 aa24.02■■□□□ 1.44
H3F3B-206ENST00000587560 RNMTO43148 476 aaKnown RBP24.01■■□□□ 1.43
H3F3B-206ENST00000587560 HSP90AB1P08238 724 aaKnown RBP24.01■■□□□ 1.43
H3F3B-206ENST00000587560 LGR6Q9HBX8 967 aa24.01■■□□□ 1.43
H3F3B-206ENST00000587560 DOT1LQ8TEK3 1739 aa24.01■■□□□ 1.43
H3F3B-206ENST00000587560 DCTN1Q14203 1278 aa24■■□□□ 1.43
H3F3B-206ENST00000587560 MPRIPQ6WCQ1 1025 aa24■■□□□ 1.43
H3F3B-206ENST00000587560 MCM10Q7L590 875 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms