RNA–Protein interactions for RNA: ENST00000587411.5

RANBP3-209, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 2,669 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-209ENST00000587411 RBM27Q9P2N5 1060 aaKnown RBP20.15■□□□□ 0.82
RANBP3-209ENST00000587411 ATP7BP35670 1465 aa20.15■□□□□ 0.82
RANBP3-209ENST00000587411 CPSF1Q10570 1443 aaKnown RBP20.15■□□□□ 0.82
RANBP3-209ENST00000587411 DYNC1I1O14576 645 aa20.14■□□□□ 0.82
RANBP3-209ENST00000587411 XPCQ01831 940 aaPredicted RBP20.14■□□□□ 0.82
RANBP3-209ENST00000587411 IDI1Q13907 227 aa20.14■□□□□ 0.82
RANBP3-209ENST00000587411 C16orf71Q8IYS4 520 aaPredicted RBP20.14■□□□□ 0.82
RANBP3-209ENST00000587411 AK9Q5TCS8 1911 aa20.14■□□□□ 0.81
RANBP3-209ENST00000587411 UQCRHLA0A096LP55 91 aa20.14■□□□□ 0.81
RANBP3-209ENST00000587411 UQCRHP07919 91 aa20.14■□□□□ 0.81
RANBP3-209ENST00000587411 TMEM63CQ9P1W3 806 aa20.14■□□□□ 0.81
RANBP3-209ENST00000587411 RIMS2Q9UQ26 1411 aa20.14■□□□□ 0.81
RANBP3-209ENST00000587411 CDK12Q9NYV4 1490 aaPredicted RBP20.13■□□□□ 0.81
RANBP3-209ENST00000587411 ERC2O15083 957 aa20.13■□□□□ 0.81
RANBP3-209ENST00000587411 IL13P35225 146 aa20.13■□□□□ 0.81
RANBP3-209ENST00000587411 RBM10P98175 930 aaKnown RBP20.13■□□□□ 0.81
RANBP3-209ENST00000587411 MCM2P49736 904 aa20.12■□□□□ 0.81
RANBP3-209ENST00000587411 FAM13BQ9NYF5 915 aa20.12■□□□□ 0.81
RANBP3-209ENST00000587411 CEP85Q6P2H3 762 aa20.12■□□□□ 0.81
RANBP3-209ENST00000587411 SYCE3A1L190 88 aa20.11■□□□□ 0.81
RANBP3-209ENST00000587411 SASS6Q6UVJ0 657 aa20.11■□□□□ 0.81
RANBP3-209ENST00000587411 OTUD7AQ8TE49 926 aaPredicted RBP20.1■□□□□ 0.81
RANBP3-209ENST00000587411 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.1■□□□□ 0.81
RANBP3-209ENST00000587411 SYAP1Q96A49 352 aaPredicted RBP20.09■□□□□ 0.81
RANBP3-209ENST00000587411 AATKQ6ZMQ8 1374 aa20.09■□□□□ 0.81
RANBP3-209ENST00000587411 RTL1A6NKG5 1358 aa20.08■□□□□ 0.81
RANBP3-209ENST00000587411 RGS12O14924 1447 aa20.08■□□□□ 0.81
RANBP3-209ENST00000587411 OSBPL3Q9H4L5 887 aa20.08■□□□□ 0.8
RANBP3-209ENST00000587411 TMEM131LA2VDJ0 1609 aa20.07■□□□□ 0.8
RANBP3-209ENST00000587411 BRD1O95696 1058 aa20.07■□□□□ 0.8
RANBP3-209ENST00000587411 PTPRCP08575 1304 aa20.07■□□□□ 0.8
RANBP3-209ENST00000587411 TSPY26PQ9H489 355 aa20.07■□□□□ 0.8
RANBP3-209ENST00000587411 EMILIN1Q9Y6C2 1016 aa20.07■□□□□ 0.8
RANBP3-209ENST00000587411 HMMRO75330 724 aa20.06■□□□□ 0.8
RANBP3-209ENST00000587411 FBLN1P23142 703 aa20.06■□□□□ 0.8
RANBP3-209ENST00000587411 TMX3Q96JJ7 454 aa20.06■□□□□ 0.8
RANBP3-209ENST00000587411 CUL4AQ13619 759 aa20.06■□□□□ 0.8
RANBP3-209ENST00000587411 EDC4Q6P2E9 1401 aaKnown RBP20.06■□□□□ 0.8
RANBP3-209ENST00000587411 SMARCA5O60264 1052 aaPredicted RBP20.05■□□□□ 0.8
RANBP3-209ENST00000587411 PHF14O94880 888 aa20.05■□□□□ 0.8
RANBP3-209ENST00000587411 INTS4Q96HW7 963 aaKnown RBP20.05■□□□□ 0.8
RANBP3-209ENST00000587411 NSFL1CQ9UNZ2 370 aaKnown RBP20.05■□□□□ 0.8
RANBP3-209ENST00000587411 MAP2P11137 1827 aaKnown RBP20.05■□□□□ 0.8
RANBP3-209ENST00000587411 ALKQ9UM73 1620 aa20.05■□□□□ 0.8
RANBP3-209ENST00000587411 MSH6P52701 1360 aa20.05■□□□□ 0.8
RANBP3-209ENST00000587411 NEK4P51957 841 aa20.04■□□□□ 0.8
RANBP3-209ENST00000587411 KIAA2012Q0VF49 1180 aa20.04■□□□□ 0.8
RANBP3-209ENST00000587411 MCCP23508 829 aa20.04■□□□□ 0.8
RANBP3-209ENST00000587411 DLC1Q96QB1 1528 aa20.04■□□□□ 0.8
RANBP3-209ENST00000587411 KIAA0232Q92628 1395 aa20.03■□□□□ 0.8
RANBP3-209ENST00000587411 DLG5Q8TDM6 1919 aa20.03■□□□□ 0.8
RANBP3-209ENST00000587411 PTMAP06454 111 aaKnown RBP20.03■□□□□ 0.8
RANBP3-209ENST00000587411 ANAPC15P60006 121 aa20.02■□□□□ 0.8
RANBP3-209ENST00000587411 FAM83GA6ND36 823 aa20.02■□□□□ 0.8
RANBP3-209ENST00000587411 PDE1AP54750 535 aa20.01■□□□□ 0.79
RANBP3-209ENST00000587411 FAM184AQ8NB25 1140 aa20.01■□□□□ 0.79
RANBP3-209ENST00000587411 RNF214Q8ND24 703 aa20.01■□□□□ 0.79
RANBP3-209ENST00000587411 MEIS3Q99687 375 aa20.01■□□□□ 0.79
RANBP3-209ENST00000587411 DIP2CQ9Y2E4 1556 aa20.01■□□□□ 0.79
RANBP3-209ENST00000587411 MYO5BQ9ULV0 1848 aa20.01■□□□□ 0.79
RANBP3-209ENST00000587411 APBB1O00213 710 aa20■□□□□ 0.79
RANBP3-209ENST00000587411 UVSSAQ2YD98 709 aa20■□□□□ 0.79
RANBP3-209ENST00000587411 SMAP1Q8IYB5 467 aaPredicted RBP20■□□□□ 0.79
RANBP3-209ENST00000587411 CHAMP1Q96JM3 812 aa20■□□□□ 0.79
RANBP3-209ENST00000587411 CHL1O00533 1208 aa19.99■□□□□ 0.79
RANBP3-209ENST00000587411 DCTN1Q14203 1278 aa19.99■□□□□ 0.79
RANBP3-209ENST00000587411 FOXD4L5Q5VV16 416 aaPredicted RBP19.99■□□□□ 0.79
RANBP3-209ENST00000587411 FOXD4L4Q8WXT5 416 aaPredicted RBP19.99■□□□□ 0.79
RANBP3-209ENST00000587411 SENP3Q9H4L4 574 aaPredicted RBP19.99■□□□□ 0.79
RANBP3-209ENST00000587411 SSH2Q76I76 1423 aa19.99■□□□□ 0.79
RANBP3-209ENST00000587411 PREX1Q8TCU6 1659 aa19.99■□□□□ 0.79
RANBP3-209ENST00000587411 IL17RAQ96F46 866 aa19.99■□□□□ 0.79
RANBP3-209ENST00000587411 ESYT1Q9BSJ8 1104 aa19.99■□□□□ 0.79
RANBP3-209ENST00000587411 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.99■□□□□ 0.79
RANBP3-209ENST00000587411 PRDM4Q9UKN5 801 aa19.98■□□□□ 0.79
RANBP3-209ENST00000587411 MYRIPQ8NFW9 859 aa19.98■□□□□ 0.79
RANBP3-209ENST00000587411 NPM1P06748 294 aaKnown RBP eCLIP19.97■□□□□ 0.79
RANBP3-209ENST00000587411 NME9Q86XW9 330 aa19.97■□□□□ 0.79
RANBP3-209ENST00000587411 COG3Q96JB2 828 aa19.97■□□□□ 0.79
RANBP3-209ENST00000587411 PRIMPOLQ96LW4 560 aa19.97■□□□□ 0.79
RANBP3-209ENST00000587411 NEO1Q92859 1461 aa19.97■□□□□ 0.79
RANBP3-209ENST00000587411 HMGN5P82970 282 aaKnown RBP19.96■□□□□ 0.79
RANBP3-209ENST00000587411 WDR33Q9C0J8 1336 aaKnown RBP19.96■□□□□ 0.79
RANBP3-209ENST00000587411 CCT4P50991 539 aaKnown RBP19.95■□□□□ 0.78
RANBP3-209ENST00000587411 EPB41L2O43491 1005 aaKnown RBP19.94■□□□□ 0.78
RANBP3-209ENST00000587411 PIBF1Q8WXW3 757 aa19.94■□□□□ 0.78
RANBP3-209ENST00000587411 SALL3Q9BXA9 1300 aa19.94■□□□□ 0.78
RANBP3-209ENST00000587411 KLHL34Q8N239 644 aa19.94■□□□□ 0.78
RANBP3-209ENST00000587411 LETM1O95202 739 aaPredicted RBP19.93■□□□□ 0.78
RANBP3-209ENST00000587411 KRT24Q2M2I5 525 aa19.93■□□□□ 0.78
RANBP3-209ENST00000587411 NRKQ7Z2Y5 1582 aa19.93■□□□□ 0.78
RANBP3-209ENST00000587411 OSCARQ8IYS5 282 aa19.93■□□□□ 0.78
RANBP3-209ENST00000587411 TMEM87AQ8NBN3 555 aa19.93■□□□□ 0.78
RANBP3-209ENST00000587411 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.93■□□□□ 0.78
RANBP3-209ENST00000587411 CCDC94Q9BW85 323 aaPredicted RBP19.93■□□□□ 0.78
RANBP3-209ENST00000587411 DNTTIP2Q5QJE6 756 aaKnown RBP19.92■□□□□ 0.78
RANBP3-209ENST00000587411 CHMLP26374 656 aa19.91■□□□□ 0.78
RANBP3-209ENST00000587411 GTF2F1P35269 517 aaKnown RBP eCLIP19.91■□□□□ 0.78
RANBP3-209ENST00000587411 RRS1Q15050 365 aaKnown RBP19.91■□□□□ 0.78
RANBP3-209ENST00000587411 CCDC183Q5T5S1 534 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms