RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 FXR2P51116 673 aaKnown RBP eCLIP10.98□□□□□ -0.65
VMP1-204ENST00000587259 TMC1Q8TDI8 760 aa10.98□□□□□ -0.65
VMP1-204ENST00000587259 LRRC4BQ9NT99 713 aa10.98□□□□□ -0.65
VMP1-204ENST00000587259 TTC21AQ8NDW8 1320 aa10.98□□□□□ -0.65
VMP1-204ENST00000587259 CD163L1Q9NR16 1453 aa10.98□□□□□ -0.65
VMP1-204ENST00000587259 FBLN1P23142 703 aa10.97□□□□□ -0.65
VMP1-204ENST00000587259 KLHL34Q8N239 644 aa10.97□□□□□ -0.65
VMP1-204ENST00000587259 ANKRD24Q8TF21 1146 aa10.97□□□□□ -0.65
VMP1-204ENST00000587259 LTV1Q96GA3 475 aaPredicted RBP10.97□□□□□ -0.65
VMP1-204ENST00000587259 SLC12A5Q9H2X9 1139 aa10.97□□□□□ -0.65
VMP1-204ENST00000587259 ERBB3P21860 1342 aa10.97□□□□□ -0.65
VMP1-204ENST00000587259 CCDC7Q96M83 1385 aa10.97□□□□□ -0.65
VMP1-204ENST00000587259 NHSQ6T4R5 1651 aa10.96□□□□□ -0.65
VMP1-204ENST00000587259 SBNO2Q9Y2G9 1366 aa10.96□□□□□ -0.65
VMP1-204ENST00000587259 IL2RBP14784 551 aa10.96□□□□□ -0.65
VMP1-204ENST00000587259 MTFR1LQ9H019 292 aa10.96□□□□□ -0.65
VMP1-204ENST00000587259 MON2Q7Z3U7 1717 aa10.95□□□□□ -0.66
VMP1-204ENST00000587259 PAPPAQ13219 1627 aa10.95□□□□□ -0.66
VMP1-204ENST00000587259 DDX54Q8TDD1 881 aaKnown RBP10.95□□□□□ -0.66
VMP1-204ENST00000587259 ARXQ96QS3 562 aa10.95□□□□□ -0.66
VMP1-204ENST00000587259 BTAF1O14981 1849 aa10.95□□□□□ -0.66
VMP1-204ENST00000587259 LTN1O94822 1766 aa10.95□□□□□ -0.66
VMP1-204ENST00000587259 ABCC6O95255 1503 aa10.94□□□□□ -0.66
VMP1-204ENST00000587259 SPDYE1Q8NFV5 336 aaPredicted RBP10.94□□□□□ -0.66
VMP1-204ENST00000587259 USP31Q70CQ4 1352 aa10.93□□□□□ -0.66
VMP1-204ENST00000587259 KAT6BQ8WYB5 2073 aa10.93□□□□□ -0.66
VMP1-204ENST00000587259 PELP1Q8IZL8 1130 aaKnown RBP10.93□□□□□ -0.66
VMP1-204ENST00000587259 SYTL4Q96C24 671 aaPredicted RBP10.93□□□□□ -0.66
VMP1-204ENST00000587259 A0A1W2PP64 1363 aa10.92□□□□□ -0.66
VMP1-204ENST00000587259 NLGN2Q8NFZ4 835 aa10.92□□□□□ -0.66
VMP1-204ENST00000587259 CARD11Q9BXL7 1154 aa10.92□□□□□ -0.66
VMP1-204ENST00000587259 PNPLA7Q6ZV29 1317 aa10.91□□□□□ -0.66
VMP1-204ENST00000587259 SENP3-EIF4A1A0A087X0R7 540 aa10.91□□□□□ -0.66
VMP1-204ENST00000587259 PRIM1P49642 420 aaKnown RBP10.91□□□□□ -0.66
VMP1-204ENST00000587259 GPR162Q16538 588 aa10.91□□□□□ -0.66
VMP1-204ENST00000587259 HDGFL2Q7Z4V5 671 aaPredicted RBP10.9□□□□□ -0.66
VMP1-204ENST00000587259 USHBP1Q8N6Y0 703 aa10.9□□□□□ -0.66
VMP1-204ENST00000587259 USP54Q70EL1 1684 aa10.89□□□□□ -0.67
VMP1-204ENST00000587259 DIEXFQ68CQ4 756 aaKnown RBP10.89□□□□□ -0.67
VMP1-204ENST00000587259 IP6K1Q92551 441 aa10.89□□□□□ -0.67
VMP1-204ENST00000587259 TFCP2L1Q9NZI6 479 aa10.89□□□□□ -0.67
VMP1-204ENST00000587259 EDC4Q6P2E9 1401 aaKnown RBP10.89□□□□□ -0.67
VMP1-204ENST00000587259 NSD2O96028 1365 aa10.89□□□□□ -0.67
VMP1-204ENST00000587259 GOLGB1Q14789 3259 aaKnown RBP10.89□□□□□ -0.67
VMP1-204ENST00000587259 TUBGCP6Q96RT7 1819 aa10.88□□□□□ -0.67
VMP1-204ENST00000587259 MAP3K19Q56UN5 1328 aa10.88□□□□□ -0.67
VMP1-204ENST00000587259 HAX1O00165 279 aa10.88□□□□□ -0.67
VMP1-204ENST00000587259 C1QTNF8P60827 252 aa10.88□□□□□ -0.67
VMP1-204ENST00000587259 MSL1Q68DK7 614 aa10.88□□□□□ -0.67
VMP1-204ENST00000587259 MEGF6O75095 1541 aa10.88□□□□□ -0.67
VMP1-204ENST00000587259 RGPD2P0DJD1 1756 aa10.88□□□□□ -0.67
VMP1-204ENST00000587259 DOT1LQ8TEK3 1739 aa10.87□□□□□ -0.67
VMP1-204ENST00000587259 HOXC9P31274 260 aa10.87□□□□□ -0.67
VMP1-204ENST00000587259 RRS1Q15050 365 aaKnown RBP10.87□□□□□ -0.67
VMP1-204ENST00000587259 SMIM5Q71RC9 77 aa10.87□□□□□ -0.67
VMP1-204ENST00000587259 PRKAR2AP13861 404 aaKnown RBP10.86□□□□□ -0.67
VMP1-204ENST00000587259 YBX3P16989 372 aaKnown RBP eCLIP10.86□□□□□ -0.67
VMP1-204ENST00000587259 SP7Q8TDD2 431 aaPredicted RBP10.86□□□□□ -0.67
VMP1-204ENST00000587259 TERF2IPQ9NYB0 399 aa10.86□□□□□ -0.67
VMP1-204ENST00000587259 WWC3Q9ULE0 1092 aa10.86□□□□□ -0.67
VMP1-204ENST00000587259 MAP3K5Q99683 1374 aa10.86□□□□□ -0.67
VMP1-204ENST00000587259 CHD4Q14839 1912 aa10.86□□□□□ -0.67
VMP1-204ENST00000587259 FAM208AQ9UK61 1670 aaKnown RBP10.85□□□□□ -0.67
VMP1-204ENST00000587259 SHANK3Q9BYB0 1731 aa10.85□□□□□ -0.67
VMP1-204ENST00000587259 POLD1P28340 1107 aa10.85□□□□□ -0.67
VMP1-204ENST00000587259 AMPHP49418 695 aa10.85□□□□□ -0.67
VMP1-204ENST00000587259 NBPF6Q5VWK0 638 aa10.85□□□□□ -0.67
VMP1-204ENST00000587259 COL23A1Q86Y22 540 aaPredicted RBP10.85□□□□□ -0.67
VMP1-204ENST00000587259 NBPF4Q96M43 638 aa10.85□□□□□ -0.67
VMP1-204ENST00000587259 GGNBP2Q9H3C7 697 aa10.85□□□□□ -0.67
VMP1-204ENST00000587259 CCNL1Q9UK58 526 aaPredicted RBP10.85□□□□□ -0.67
VMP1-204ENST00000587259 ST20-MTHFSA0A0A6YYL1 179 aa10.84□□□□□ -0.67
VMP1-204ENST00000587259 SLC27A3Q5K4L6 730 aa10.84□□□□□ -0.67
VMP1-204ENST00000587259 ZCRB1Q8TBF4 217 aaKnown RBP10.84□□□□□ -0.67
VMP1-204ENST00000587259 COG3Q96JB2 828 aa10.84□□□□□ -0.67
VMP1-204ENST00000587259 TESK2Q96S53 571 aa10.84□□□□□ -0.67
VMP1-204ENST00000587259 ANKRD36BQ8N2N9 1353 aa10.84□□□□□ -0.67
VMP1-204ENST00000587259 AMIGO3Q86WK7 504 aa10.83□□□□□ -0.68
VMP1-204ENST00000587259 GIGYF1O75420 1035 aaPredicted RBP10.82□□□□□ -0.68
VMP1-204ENST00000587259 SLC16A10Q8TF71 515 aa10.82□□□□□ -0.68
VMP1-204ENST00000587259 LY75O60449 1722 aa10.81□□□□□ -0.68
VMP1-204ENST00000587259 PRR29P0C7W0 189 aa10.81□□□□□ -0.68
VMP1-204ENST00000587259 COL24A1Q17RW2 1714 aa10.81□□□□□ -0.68
VMP1-204ENST00000587259 QSER1Q2KHR3 1735 aa10.81□□□□□ -0.68
VMP1-204ENST00000587259 USP47Q96K76 1375 aa10.8□□□□□ -0.68
VMP1-204ENST00000587259 FYB1O15117 783 aa10.8□□□□□ -0.68
VMP1-204ENST00000587259 HSP90AB2PQ58FF8 381 aa10.8□□□□□ -0.68
VMP1-204ENST00000587259 CHADLQ6NUI6 762 aa10.8□□□□□ -0.68
VMP1-204ENST00000587259 PHF14O94880 888 aa10.79□□□□□ -0.68
VMP1-204ENST00000587259 MPRIPQ6WCQ1 1025 aa10.79□□□□□ -0.68
VMP1-204ENST00000587259 ZNF526Q8TF50 670 aaPredicted RBP10.79□□□□□ -0.68
VMP1-204ENST00000587259 CYP27B1O15528 508 aa10.78□□□□□ -0.68
VMP1-204ENST00000587259 RAPGEF4Q8WZA2 1011 aa10.78□□□□□ -0.68
VMP1-204ENST00000587259 CEP350Q5VT06 3117 aa10.78□□□□□ -0.68
VMP1-204ENST00000587259 PALLDQ8WX93 1383 aa10.77□□□□□ -0.68
VMP1-204ENST00000587259 ATP10DQ9P241 1426 aa10.77□□□□□ -0.68
VMP1-204ENST00000587259 TATP17735 454 aaPredicted RBP10.77□□□□□ -0.69
VMP1-204ENST00000587259 EIF4G2P78344 907 aaKnown RBP eCLIP10.77□□□□□ -0.69
VMP1-204ENST00000587259 EVX2Q03828 476 aa10.77□□□□□ -0.69
VMP1-204ENST00000587259 EMILIN1Q9Y6C2 1016 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms