RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 TOGARAM1Q9Y4F4 1720 aa20.09■□□□□ 0.81
CXXC1-208ENST00000587170 ANKRD26Q9UPS8 1709 aa20.08■□□□□ 0.81
CXXC1-208ENST00000587170 TMC1Q8TDI8 760 aa20.08■□□□□ 0.81
CXXC1-208ENST00000587170 RTL1A6NKG5 1358 aa20.08■□□□□ 0.8
CXXC1-208ENST00000587170 UBR3Q6ZT12 1888 aa20.07■□□□□ 0.8
CXXC1-208ENST00000587170 MAP3K19Q56UN5 1328 aa20.04■□□□□ 0.8
CXXC1-208ENST00000587170 HOXC9P31274 260 aa20.03■□□□□ 0.8
CXXC1-208ENST00000587170 C1QTNF8P60827 252 aa20.03■□□□□ 0.8
CXXC1-208ENST00000587170 DDX54Q8TDD1 881 aaKnown RBP20.03■□□□□ 0.8
CXXC1-208ENST00000587170 TESK2Q96S53 571 aa20.03■□□□□ 0.8
CXXC1-208ENST00000587170 MAP2P11137 1827 aaKnown RBP20.02■□□□□ 0.8
CXXC1-208ENST00000587170 POLD1P28340 1107 aa20.02■□□□□ 0.8
CXXC1-208ENST00000587170 C4BP0C0L5 1744 aa20.02■□□□□ 0.79
CXXC1-208ENST00000587170 PRIM1P49642 420 aaKnown RBP20■□□□□ 0.79
CXXC1-208ENST00000587170 GPR162Q16538 588 aa20■□□□□ 0.79
CXXC1-208ENST00000587170 TFCP2L1Q9NZI6 479 aa20■□□□□ 0.79
CXXC1-208ENST00000587170 CGNL1Q0VF96 1302 aa20■□□□□ 0.79
CXXC1-208ENST00000587170 LTV1Q96GA3 475 aaPredicted RBP19.99■□□□□ 0.79
CXXC1-208ENST00000587170 COG3Q96JB2 828 aa19.99■□□□□ 0.79
CXXC1-208ENST00000587170 TONSLQ96HA7 1378 aa19.98■□□□□ 0.79
CXXC1-208ENST00000587170 ZCRB1Q8TBF4 217 aaKnown RBP19.98■□□□□ 0.79
CXXC1-208ENST00000587170 SENP3-EIF4A1A0A087X0R7 540 aa19.97■□□□□ 0.79
CXXC1-208ENST00000587170 KCNQ4P56696 695 aa19.97■□□□□ 0.79
CXXC1-208ENST00000587170 NLGN2Q8NFZ4 835 aa19.97■□□□□ 0.79
CXXC1-208ENST00000587170 SYTL4Q96C24 671 aaPredicted RBP19.97■□□□□ 0.79
CXXC1-208ENST00000587170 USP47Q96K76 1375 aa19.96■□□□□ 0.79
CXXC1-208ENST00000587170 SMG6Q86US8 1419 aaKnown RBP19.96■□□□□ 0.79
CXXC1-208ENST00000587170 KIF13BQ9NQT8 1826 aa19.95■□□□□ 0.78
CXXC1-208ENST00000587170 NCAPD2Q15021 1401 aa19.95■□□□□ 0.78
CXXC1-208ENST00000587170 CCNL1Q9UK58 526 aaPredicted RBP19.95■□□□□ 0.78
CXXC1-208ENST00000587170 KIF24Q5T7B8 1368 aa19.95■□□□□ 0.78
CXXC1-208ENST00000587170 SLC24A1O60721 1099 aa19.94■□□□□ 0.78
CXXC1-208ENST00000587170 AMPHP49418 695 aa19.94■□□□□ 0.78
CXXC1-208ENST00000587170 GIGYF1O75420 1035 aaPredicted RBP19.93■□□□□ 0.78
CXXC1-208ENST00000587170 FBLN1P23142 703 aa19.93■□□□□ 0.78
CXXC1-208ENST00000587170 KLHL34Q8N239 644 aa19.93■□□□□ 0.78
CXXC1-208ENST00000587170 INSRP06213 1382 aa19.93■□□□□ 0.78
CXXC1-208ENST00000587170 ST20-MTHFSA0A0A6YYL1 179 aa19.92■□□□□ 0.78
CXXC1-208ENST00000587170 YBX3P16989 372 aaKnown RBP eCLIP19.92■□□□□ 0.78
CXXC1-208ENST00000587170 NBPF6Q5VWK0 638 aa19.92■□□□□ 0.78
CXXC1-208ENST00000587170 COL23A1Q86Y22 540 aaPredicted RBP19.92■□□□□ 0.78
CXXC1-208ENST00000587170 NBPF4Q96M43 638 aa19.92■□□□□ 0.78
CXXC1-208ENST00000587170 ZNF831Q5JPB2 1677 aa19.91■□□□□ 0.78
CXXC1-208ENST00000587170 KIAA1551Q9HCM1 1747 aa19.91■□□□□ 0.78
CXXC1-208ENST00000587170 CICQ96RK0 1608 aaPredicted RBP19.91■□□□□ 0.78
CXXC1-208ENST00000587170 PCDH11XQ9BZA7 1347 aa19.9■□□□□ 0.78
CXXC1-208ENST00000587170 PCDH11YQ9BZA8 1340 aa19.9■□□□□ 0.78
CXXC1-208ENST00000587170 FLT4P35916 1363 aa19.9■□□□□ 0.78
CXXC1-208ENST00000587170 FYB1O15117 783 aa19.89■□□□□ 0.77
CXXC1-208ENST00000587170 GRIN3BO60391 1043 aa19.89■□□□□ 0.77
CXXC1-208ENST00000587170 ADCY9O60503 1353 aa19.89■□□□□ 0.77
CXXC1-208ENST00000587170 RRS1Q15050 365 aaKnown RBP19.89■□□□□ 0.77
CXXC1-208ENST00000587170 PALLDQ8WX93 1383 aa19.89■□□□□ 0.77
CXXC1-208ENST00000587170 HMGB2P26583 209 aaKnown RBP19.88■□□□□ 0.77
CXXC1-208ENST00000587170 PELP1Q8IZL8 1130 aaKnown RBP19.88■□□□□ 0.77
CXXC1-208ENST00000587170 RAPGEF4Q8WZA2 1011 aa19.88■□□□□ 0.77
CXXC1-208ENST00000587170 BRCA1P38398 1863 aaKnown RBP19.88■□□□□ 0.77
CXXC1-208ENST00000587170 USHBP1Q8N6Y0 703 aa19.87■□□□□ 0.77
CXXC1-208ENST00000587170 COL5A3P25940 1745 aaPredicted RBP19.87■□□□□ 0.77
CXXC1-208ENST00000587170 NSD3Q9BZ95 1437 aa19.86■□□□□ 0.77
CXXC1-208ENST00000587170 ATP10DQ9P241 1426 aa19.86■□□□□ 0.77
CXXC1-208ENST00000587170 FLAD1Q8NFF5 587 aa19.86■□□□□ 0.77
CXXC1-208ENST00000587170 CD2APQ9Y5K6 639 aa19.86■□□□□ 0.77
CXXC1-208ENST00000587170 GGNBP2Q9H3C7 697 aa19.85■□□□□ 0.77
CXXC1-208ENST00000587170 TATP17735 454 aaPredicted RBP19.84■□□□□ 0.77
CXXC1-208ENST00000587170 CYP27B1O15528 508 aa19.83■□□□□ 0.77
CXXC1-208ENST00000587170 HSP90AB2PQ58FF8 381 aa19.83■□□□□ 0.77
CXXC1-208ENST00000587170 MSL1Q68DK7 614 aa19.83■□□□□ 0.77
CXXC1-208ENST00000587170 MSH5O43196 834 aa19.82■□□□□ 0.76
CXXC1-208ENST00000587170 N4BP2Q86UW6 1770 aaPredicted RBP19.82■□□□□ 0.76
CXXC1-208ENST00000587170 C4AP0C0L4 1744 aa19.82■□□□□ 0.76
CXXC1-208ENST00000587170 TMF1P82094 1093 aa19.8■□□□□ 0.76
CXXC1-208ENST00000587170 ARFGEF1Q9Y6D6 1849 aa19.79■□□□□ 0.76
CXXC1-208ENST00000587170 NKX1-1Q15270 411 aaPredicted RBP19.79■□□□□ 0.76
CXXC1-208ENST00000587170 AMIGO3Q86WK7 504 aa19.79■□□□□ 0.76
CXXC1-208ENST00000587170 SMARCC1Q92922 1105 aaPredicted RBP19.79■□□□□ 0.76
CXXC1-208ENST00000587170 PLEKHG2Q9H7P9 1386 aa19.79■□□□□ 0.76
CXXC1-208ENST00000587170 MPRIPQ6WCQ1 1025 aa19.78■□□□□ 0.76
CXXC1-208ENST00000587170 MYH14Q7Z406 1995 aaKnown RBP19.76■□□□□ 0.75
CXXC1-208ENST00000587170 AK7Q96M32 723 aa19.76■□□□□ 0.75
CXXC1-208ENST00000587170 VIRMAQ69YN4 1812 aaKnown RBP19.75■□□□□ 0.75
CXXC1-208ENST00000587170 SSFA2P28290 1259 aa19.75■□□□□ 0.75
CXXC1-208ENST00000587170 PIGBQ92521 554 aa19.75■□□□□ 0.75
CXXC1-208ENST00000587170 EMILIN1Q9Y6C2 1016 aa19.75■□□□□ 0.75
CXXC1-208ENST00000587170 CDCA8Q53HL2 280 aa19.74■□□□□ 0.75
CXXC1-208ENST00000587170 IGSF1Q8N6C5 1336 aa19.74■□□□□ 0.75
CXXC1-208ENST00000587170 KDRP35968 1356 aa19.73■□□□□ 0.75
CXXC1-208ENST00000587170 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.73■□□□□ 0.75
CXXC1-208ENST00000587170 CARD14Q9BXL6 1004 aa19.73■□□□□ 0.75
CXXC1-208ENST00000587170 GPBP1L1Q9HC44 474 aaPredicted RBP19.73■□□□□ 0.75
CXXC1-208ENST00000587170 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.73■□□□□ 0.75
CXXC1-208ENST00000587170 IFFO2Q5TF58 517 aa19.72■□□□□ 0.75
CXXC1-208ENST00000587170 WASHC2AQ641Q2 1341 aa19.72■□□□□ 0.75
CXXC1-208ENST00000587170 LOC102724428A0A0B4J2F2 783 aa19.71■□□□□ 0.75
CXXC1-208ENST00000587170 SIK1P57059 783 aa19.71■□□□□ 0.75
CXXC1-208ENST00000587170 LINC00116Q8NCU8 138 aa19.71■□□□□ 0.75
CXXC1-208ENST00000587170 SPG7Q9UQ90 795 aa19.71■□□□□ 0.75
CXXC1-208ENST00000587170 PXDNLA1KZ92 1463 aa19.71■□□□□ 0.75
CXXC1-208ENST00000587170 SCN11AQ9UI33 1791 aa19.7■□□□□ 0.74
CXXC1-208ENST00000587170 TJP1Q07157 1748 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms