RNA–Protein interactions for RNA: ENST00000586967.1

CALR-204, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 394 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-204ENST00000586967 SPATA31A1Q5TZJ5 1347 aa19.39■□□□□ 0.69
CALR-204ENST00000586967 SPATA31A5Q5VU36 1347 aa19.39■□□□□ 0.69
CALR-204ENST00000586967 SPATA31A7Q8IWB4 1347 aa19.39■□□□□ 0.69
CALR-204ENST00000586967 YTHDC1Q96MU7 727 aaKnown RBP19.38■□□□□ 0.69
CALR-204ENST00000586967 TMPOP42166 694 aaKnown RBP19.37■□□□□ 0.69
CALR-204ENST00000586967 BARGINQ6ZT62 677 aa19.37■□□□□ 0.69
CALR-204ENST00000586967 USP35Q9P2H5 1018 aa19.37■□□□□ 0.69
CALR-204ENST00000586967 OVOS2A0A0G2JMS6 1433 aa19.36■□□□□ 0.69
CALR-204ENST00000586967 ZBED9Q6R2W3 1325 aa19.36■□□□□ 0.69
CALR-204ENST00000586967 CCDC27Q2M243 656 aa19.36■□□□□ 0.69
CALR-204ENST00000586967 PHACTR3Q96KR7 559 aa19.36■□□□□ 0.69
CALR-204ENST00000586967 WNK3Q9BYP7 1800 aa19.35■□□□□ 0.69
CALR-204ENST00000586967 RIPK4P57078 832 aa19.35■□□□□ 0.69
CALR-204ENST00000586967 C1orf141Q5JVX7 400 aa19.35■□□□□ 0.69
CALR-204ENST00000586967 PKD1L3Q7Z443 1732 aa19.34■□□□□ 0.69
CALR-204ENST00000586967 HTATSF1O43719 755 aaKnown RBP19.34■□□□□ 0.69
CALR-204ENST00000586967 CALD1Q05682 793 aaKnown RBP19.34■□□□□ 0.69
CALR-204ENST00000586967 RTF1Q92541 710 aaKnown RBP19.34■□□□□ 0.69
CALR-204ENST00000586967 MEGF6O75095 1541 aa19.34■□□□□ 0.69
CALR-204ENST00000586967 ATRNO75882 1429 aa19.34■□□□□ 0.69
CALR-204ENST00000586967 PCDH11XQ9BZA7 1347 aa19.32■□□□□ 0.68
CALR-204ENST00000586967 PCDH11YQ9BZA8 1340 aa19.32■□□□□ 0.68
CALR-204ENST00000586967 HSP90AB1P08238 724 aaKnown RBP19.32■□□□□ 0.68
CALR-204ENST00000586967 NEUROD2Q15784 382 aa19.32■□□□□ 0.68
CALR-204ENST00000586967 MTHFSDQ2M296 383 aaKnown RBP19.32■□□□□ 0.68
CALR-204ENST00000586967 AKAP4Q5JQC9 854 aa19.32■□□□□ 0.68
CALR-204ENST00000586967 ZNF530Q6P9A1 599 aaPredicted RBP19.32■□□□□ 0.68
CALR-204ENST00000586967 ZCRB1Q8TBF4 217 aaKnown RBP19.32■□□□□ 0.68
CALR-204ENST00000586967 GJD4Q96KN9 370 aaPredicted RBP19.32■□□□□ 0.68
CALR-204ENST00000586967 DISP2A7MBM2 1401 aa19.32■□□□□ 0.68
CALR-204ENST00000586967 GNAT3A8MTJ3 354 aa19.31■□□□□ 0.68
CALR-204ENST00000586967 PDE3BQ13370 1112 aa19.31■□□□□ 0.68
CALR-204ENST00000586967 QTRT2Q9H974 415 aaKnown RBP19.31■□□□□ 0.68
CALR-204ENST00000586967 MAP3K5Q99683 1374 aa19.31■□□□□ 0.68
CALR-204ENST00000586967 DLG5Q8TDM6 1919 aa19.3■□□□□ 0.68
CALR-204ENST00000586967 EXOC5O00471 708 aa19.3■□□□□ 0.68
CALR-204ENST00000586967 IFNL2Q8IZJ0 200 aa19.3■□□□□ 0.68
CALR-204ENST00000586967 RRP7AQ9Y3A4 280 aaKnown RBP19.3■□□□□ 0.68
CALR-204ENST00000586967 WDR63Q8IWG1 891 aa19.29■□□□□ 0.68
CALR-204ENST00000586967 PHF23Q9BUL5 403 aaPredicted RBP19.29■□□□□ 0.68
CALR-204ENST00000586967 SALL2Q9Y467 1007 aaPredicted RBP19.28■□□□□ 0.68
CALR-204ENST00000586967 TNS2Q63HR2 1409 aa19.27■□□□□ 0.68
CALR-204ENST00000586967 DDB1Q16531 1140 aa19.27■□□□□ 0.68
CALR-204ENST00000586967 WWC1Q8IX03 1113 aa19.27■□□□□ 0.68
CALR-204ENST00000586967 GOLGA2Q08379 1002 aa19.26■□□□□ 0.67
CALR-204ENST00000586967 FAM98CQ17RN3 349 aaKnown RBP19.26■□□□□ 0.67
CALR-204ENST00000586967 IL16Q14005 1332 aa19.25■□□□□ 0.67
CALR-204ENST00000586967 GLI3P10071 1580 aa19.25■□□□□ 0.67
CALR-204ENST00000586967 A0A0G2JS52 829 aa19.25■□□□□ 0.67
CALR-204ENST00000586967 PHKG2P15735 406 aa19.25■□□□□ 0.67
CALR-204ENST00000586967 RBM6P78332 1123 aaKnown RBP19.25■□□□□ 0.67
CALR-204ENST00000586967 MYT1Q01538 1121 aa19.25■□□□□ 0.67
CALR-204ENST00000586967 TRIM35Q9UPQ4 493 aa19.25■□□□□ 0.67
CALR-204ENST00000586967 ZNF521Q96K83 1311 aa19.25■□□□□ 0.67
CALR-204ENST00000586967 DCAF5Q96JK2 942 aa19.24■□□□□ 0.67
CALR-204ENST00000586967 LRRC37A3O60309 1634 aa19.23■□□□□ 0.67
CALR-204ENST00000586967 ONECUT3O60422 494 aaPredicted RBP19.23■□□□□ 0.67
CALR-204ENST00000586967 THSD7AQ9UPZ6 1657 aa19.23■□□□□ 0.67
CALR-204ENST00000586967 E9PSI1 815 aa19.22■□□□□ 0.67
CALR-204ENST00000586967 DDX54Q8TDD1 881 aaKnown RBP19.22■□□□□ 0.67
CALR-204ENST00000586967 MYH16Q9H6N6 1097 aa19.22■□□□□ 0.67
CALR-204ENST00000586967 SHANK3Q9BYB0 1731 aa19.22■□□□□ 0.67
CALR-204ENST00000586967 CYP27B1O15528 508 aa19.21■□□□□ 0.67
CALR-204ENST00000586967 CENPBP07199 599 aaPredicted RBP19.21■□□□□ 0.67
CALR-204ENST00000586967 TEFQ10587 303 aa19.21■□□□□ 0.67
CALR-204ENST00000586967 NKX1-1Q15270 411 aaPredicted RBP19.21■□□□□ 0.67
CALR-204ENST00000586967 SENP3-EIF4A1A0A087X0R7 540 aa19.2■□□□□ 0.66
CALR-204ENST00000586967 RXRBP28702 533 aa19.2■□□□□ 0.66
CALR-204ENST00000586967 GNAI1P63096 354 aa19.2■□□□□ 0.66
CALR-204ENST00000586967 BABAM1Q9NWV8 329 aa19.2■□□□□ 0.66
CALR-204ENST00000586967 ADAMTS7Q9UKP4 1686 aa19.2■□□□□ 0.66
CALR-204ENST00000586967 CEMIPQ8WUJ3 1361 aa19.19■□□□□ 0.66
CALR-204ENST00000586967 SCN11AQ9UI33 1791 aa19.19■□□□□ 0.66
CALR-204ENST00000586967 RNMTO43148 476 aaKnown RBP19.19■□□□□ 0.66
CALR-204ENST00000586967 MCM10Q7L590 875 aa19.19■□□□□ 0.66
CALR-204ENST00000586967 IFT57Q9NWB7 429 aa19.19■□□□□ 0.66
CALR-204ENST00000586967 VIRMAQ69YN4 1812 aaKnown RBP19.18■□□□□ 0.66
CALR-204ENST00000586967 ERVV-2B6SEH9 535 aa19.18■□□□□ 0.66
CALR-204ENST00000586967 MPRIPQ6WCQ1 1025 aa19.18■□□□□ 0.66
CALR-204ENST00000586967 SEPT12Q8IYM1 358 aa19.17■□□□□ 0.66
CALR-204ENST00000586967 IL17REQ8NFR9 667 aa19.17■□□□□ 0.66
CALR-204ENST00000586967 CFAP44Q96MT7 982 aa19.17■□□□□ 0.66
CALR-204ENST00000586967 DCTN1Q14203 1278 aa19.16■□□□□ 0.66
CALR-204ENST00000586967 TAF7Q15545 349 aaPredicted RBP19.16■□□□□ 0.66
CALR-204ENST00000586967 SLFN5Q08AF3 891 aa19.15■□□□□ 0.66
CALR-204ENST00000586967 MRC1P22897 1456 aa19.15■□□□□ 0.66
CALR-204ENST00000586967 CABP4P57796 275 aa19.14■□□□□ 0.65
CALR-204ENST00000586967 SLC52A2Q9HAB3 445 aa19.14■□□□□ 0.65
CALR-204ENST00000586967 LGR6Q9HBX8 967 aa19.14■□□□□ 0.65
CALR-204ENST00000586967 LAS1LQ9Y4W2 734 aaKnown RBP19.14■□□□□ 0.65
CALR-204ENST00000586967 KDM6AO15550 1401 aaPredicted RBP19.14■□□□□ 0.65
CALR-204ENST00000586967 THUMPD2Q9BTF0 503 aaKnown RBP19.13■□□□□ 0.65
CALR-204ENST00000586967 BCL9O00512 1426 aa19.12■□□□□ 0.65
CALR-204ENST00000586967 ZNF853P0CG23 659 aa19.12■□□□□ 0.65
CALR-204ENST00000586967 MARCH10Q8NA82 808 aaPredicted RBP19.12■□□□□ 0.65
CALR-204ENST00000586967 RGS17Q9UGC6 210 aaPredicted RBP19.12■□□□□ 0.65
CALR-204ENST00000586967 CHL1O00533 1208 aa19.11■□□□□ 0.65
CALR-204ENST00000586967 TRMT2AQ8IZ69 625 aaKnown RBP19.11■□□□□ 0.65
CALR-204ENST00000586967 TMOD3Q9NYL9 352 aa19.11■□□□□ 0.65
CALR-204ENST00000586967 TSPYL4Q9UJ04 414 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 250.7 ms