RNA–Protein interactions for RNA: ENST00000586963.1

CAPNS1-203, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-203ENST00000586963 FAM208AQ9UK61 1670 aaKnown RBP11.24□□□□□ -0.61
CAPNS1-203ENST00000586963 RRS1Q15050 365 aaKnown RBP11.23□□□□□ -0.61
CAPNS1-203ENST00000586963 CDCA8Q53HL2 280 aa11.23□□□□□ -0.61
CAPNS1-203ENST00000586963 GGNBP2Q9H3C7 697 aa11.23□□□□□ -0.61
CAPNS1-203ENST00000586963 TFCP2L1Q9NZI6 479 aa11.23□□□□□ -0.61
CAPNS1-203ENST00000586963 NSD2O96028 1365 aa11.22□□□□□ -0.61
CAPNS1-203ENST00000586963 POLD1P28340 1107 aa11.22□□□□□ -0.61
CAPNS1-203ENST00000586963 PNPLA7Q6ZV29 1317 aa11.22□□□□□ -0.61
CAPNS1-203ENST00000586963 RAPGEF4Q8WZA2 1011 aa11.22□□□□□ -0.61
CAPNS1-203ENST00000586963 KAT6BQ8WYB5 2073 aa11.21□□□□□ -0.61
CAPNS1-203ENST00000586963 MEGF6O75095 1541 aa11.21□□□□□ -0.61
CAPNS1-203ENST00000586963 KIF24Q5T7B8 1368 aa11.21□□□□□ -0.61
CAPNS1-203ENST00000586963 USP47Q96K76 1375 aa11.21□□□□□ -0.61
CAPNS1-203ENST00000586963 HMGB2P26583 209 aaKnown RBP11.21□□□□□ -0.61
CAPNS1-203ENST00000586963 KCNQ4P56696 695 aa11.21□□□□□ -0.61
CAPNS1-203ENST00000586963 ZNF784Q8NCA9 323 aaPredicted RBP11.21□□□□□ -0.61
CAPNS1-203ENST00000586963 SMG6Q86US8 1419 aaKnown RBP11.2□□□□□ -0.62
CAPNS1-203ENST00000586963 INSRP06213 1382 aa11.2□□□□□ -0.62
CAPNS1-203ENST00000586963 TATP17735 454 aaPredicted RBP11.2□□□□□ -0.62
CAPNS1-203ENST00000586963 HSP90AB2PQ58FF8 381 aa11.2□□□□□ -0.62
CAPNS1-203ENST00000586963 CCNL1Q9UK58 526 aaPredicted RBP11.2□□□□□ -0.62
CAPNS1-203ENST00000586963 GOLGB1Q14789 3259 aaKnown RBP11.2□□□□□ -0.62
CAPNS1-203ENST00000586963 FLT4P35916 1363 aa11.19□□□□□ -0.62
CAPNS1-203ENST00000586963 TRIM26Q12899 539 aaPredicted RBP11.19□□□□□ -0.62
CAPNS1-203ENST00000586963 GPR162Q16538 588 aa11.19□□□□□ -0.62
CAPNS1-203ENST00000586963 USHBP1Q8N6Y0 703 aa11.19□□□□□ -0.62
CAPNS1-203ENST00000586963 PCDH11XQ9BZA7 1347 aa11.18□□□□□ -0.62
CAPNS1-203ENST00000586963 PCDH11YQ9BZA8 1340 aa11.18□□□□□ -0.62
CAPNS1-203ENST00000586963 CARD14Q9BXL6 1004 aa11.18□□□□□ -0.62
CAPNS1-203ENST00000586963 TIMELESSQ9UNS1 1208 aa11.18□□□□□ -0.62
CAPNS1-203ENST00000586963 COL23A1Q86Y22 540 aaPredicted RBP11.17□□□□□ -0.62
CAPNS1-203ENST00000586963 QSER1Q2KHR3 1735 aa11.17□□□□□ -0.62
CAPNS1-203ENST00000586963 CYP27B1O15528 508 aa11.16□□□□□ -0.62
CAPNS1-203ENST00000586963 FLAD1Q8NFF5 587 aa11.16□□□□□ -0.62
CAPNS1-203ENST00000586963 LY75O60449 1722 aa11.15□□□□□ -0.62
CAPNS1-203ENST00000586963 COL24A1Q17RW2 1714 aa11.15□□□□□ -0.62
CAPNS1-203ENST00000586963 DOT1LQ8TEK3 1739 aa11.15□□□□□ -0.62
CAPNS1-203ENST00000586963 SHANK3Q9BYB0 1731 aa11.15□□□□□ -0.62
CAPNS1-203ENST00000586963 MSH5O43196 834 aa11.15□□□□□ -0.62
CAPNS1-203ENST00000586963 KLHL34Q8N239 644 aa11.15□□□□□ -0.62
CAPNS1-203ENST00000586963 SMARCC1Q92922 1105 aaPredicted RBP11.15□□□□□ -0.62
CAPNS1-203ENST00000586963 EMILIN1Q9Y6C2 1016 aa11.15□□□□□ -0.62
CAPNS1-203ENST00000586963 RGPD2P0DJD1 1756 aa11.14□□□□□ -0.63
CAPNS1-203ENST00000586963 NKX1-1Q15270 411 aaPredicted RBP11.14□□□□□ -0.63
CAPNS1-203ENST00000586963 MPRIPQ6WCQ1 1025 aa11.14□□□□□ -0.63
CAPNS1-203ENST00000586963 NLGN2Q8NFZ4 835 aa11.14□□□□□ -0.63
CAPNS1-203ENST00000586963 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.14□□□□□ -0.63
CAPNS1-203ENST00000586963 PALLDQ8WX93 1383 aa11.14□□□□□ -0.63
CAPNS1-203ENST00000586963 WASHC2AQ641Q2 1341 aa11.13□□□□□ -0.63
CAPNS1-203ENST00000586963 NCAPD2Q15021 1401 aa11.13□□□□□ -0.63
CAPNS1-203ENST00000586963 NSD3Q9BZ95 1437 aa11.13□□□□□ -0.63
CAPNS1-203ENST00000586963 GRIN3BO60391 1043 aa11.13□□□□□ -0.63
CAPNS1-203ENST00000586963 SPG7Q9UQ90 795 aa11.13□□□□□ -0.63
CAPNS1-203ENST00000586963 CHD4Q14839 1912 aa11.12□□□□□ -0.63
CAPNS1-203ENST00000586963 PPM1GO15355 546 aaPredicted RBP11.12□□□□□ -0.63
CAPNS1-203ENST00000586963 C1QTNF8P60827 252 aa11.12□□□□□ -0.63
CAPNS1-203ENST00000586963 PELP1Q8IZL8 1130 aaKnown RBP11.12□□□□□ -0.63
CAPNS1-203ENST00000586963 PIGBQ92521 554 aa11.12□□□□□ -0.63
CAPNS1-203ENST00000586963 CD2APQ9Y5K6 639 aa11.12□□□□□ -0.63
CAPNS1-203ENST00000586963 CLSPNQ9HAW4 1339 aa11.11□□□□□ -0.63
CAPNS1-203ENST00000586963 MSL1Q68DK7 614 aa11.11□□□□□ -0.63
CAPNS1-203ENST00000586963 EYA1Q99502 592 aa11.11□□□□□ -0.63
CAPNS1-203ENST00000586963 POLKQ9UBT6 870 aa11.11□□□□□ -0.63
CAPNS1-203ENST00000586963 TUBGCP6Q96RT7 1819 aa11.1□□□□□ -0.63
CAPNS1-203ENST00000586963 YBX3P16989 372 aaKnown RBP eCLIP11.1□□□□□ -0.635e-7■■■□□ 17.7
CAPNS1-203ENST00000586963 AK7Q96M32 723 aa11.1□□□□□ -0.63
CAPNS1-203ENST00000586963 KIF20BQ96Q89 1820 aa11.09□□□□□ -0.63
CAPNS1-203ENST00000586963 PLEKHG2Q9H7P9 1386 aa11.09□□□□□ -0.63
CAPNS1-203ENST00000586963 LOC102724428A0A0B4J2F2 783 aa11.09□□□□□ -0.63
CAPNS1-203ENST00000586963 SIK1P57059 783 aa11.09□□□□□ -0.63
CAPNS1-203ENST00000586963 IFNL2Q8IZJ0 200 aa11.09□□□□□ -0.63
CAPNS1-203ENST00000586963 PHKG2P15735 406 aa11.08□□□□□ -0.64
CAPNS1-203ENST00000586963 SSFA2P28290 1259 aa11.08□□□□□ -0.64
CAPNS1-203ENST00000586963 TMOD3Q9NYL9 352 aa11.08□□□□□ -0.64
CAPNS1-203ENST00000586963 SENP3-EIF4A1A0A087X0R7 540 aa11.07□□□□□ -0.64
CAPNS1-203ENST00000586963 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.07□□□□□ -0.64
CAPNS1-203ENST00000586963 GIGYF1O75420 1035 aaPredicted RBP11.07□□□□□ -0.64
CAPNS1-203ENST00000586963 EIF4A2Q14240 407 aaKnown RBP11.07□□□□□ -0.64
CAPNS1-203ENST00000586963 AMIGO3Q86WK7 504 aa11.07□□□□□ -0.64
CAPNS1-203ENST00000586963 ASAP1Q9ULH1 1129 aa11.07□□□□□ -0.64
CAPNS1-203ENST00000586963 C5P01031 1676 aa11.07□□□□□ -0.64
CAPNS1-203ENST00000586963 PKD1L3Q7Z443 1732 aa11.06□□□□□ -0.64
CAPNS1-203ENST00000586963 LINC00116Q8NCU8 138 aa11.06□□□□□ -0.64
CAPNS1-203ENST00000586963 ERVV-2B6SEH9 535 aa11.05□□□□□ -0.64
CAPNS1-203ENST00000586963 PHF14O94880 888 aa11.05□□□□□ -0.64
CAPNS1-203ENST00000586963 C4BP0C0L5 1744 aa11.05□□□□□ -0.64
CAPNS1-203ENST00000586963 ATP6V1AP38606 617 aa11.05□□□□□ -0.64
CAPNS1-203ENST00000586963 ITPK1Q13572 414 aa11.05□□□□□ -0.64
CAPNS1-203ENST00000586963 ATG3Q9NT62 314 aa11.05□□□□□ -0.64
CAPNS1-203ENST00000586963 ANKRD26Q9UPS8 1709 aa11.05□□□□□ -0.64
CAPNS1-203ENST00000586963 TOGARAM1Q9Y4F4 1720 aa11.05□□□□□ -0.64
CAPNS1-203ENST00000586963 IGSF1Q8N6C5 1336 aa11.05□□□□□ -0.64
CAPNS1-203ENST00000586963 TAF1LQ8IZX4 1826 aa11.05□□□□□ -0.64
CAPNS1-203ENST00000586963 HSP90AB1P08238 724 aaKnown RBP11.04□□□□□ -0.64
CAPNS1-203ENST00000586963 TNNT2P45379 298 aaPredicted RBP11.04□□□□□ -0.64
CAPNS1-203ENST00000586963 EIF4G2P78344 907 aaKnown RBP eCLIP11.04□□□□□ -0.64
CAPNS1-203ENST00000586963 SMIM5Q71RC9 77 aa11.04□□□□□ -0.64
CAPNS1-203ENST00000586963 POLR3GLQ9BT43 218 aa11.04□□□□□ -0.64
CAPNS1-203ENST00000586963 CEP350Q5VT06 3117 aa11.04□□□□□ -0.64
CAPNS1-203ENST00000586963 ITGB4P16144 1822 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms