RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 DDB1Q16531 1140 aa24.21■■□□□ 1.47
RETREG3-205ENST00000586870 NBPF6Q5VWK0 638 aa24.21■■□□□ 1.47
RETREG3-205ENST00000586870 NBPF4Q96M43 638 aa24.21■■□□□ 1.47
RETREG3-205ENST00000586870 IL2RBP14784 551 aa24.2■■□□□ 1.46
RETREG3-205ENST00000586870 RGPD5Q99666 1765 aa24.2■■□□□ 1.46
RETREG3-205ENST00000586870 EXOC5O00471 708 aa24.19■■□□□ 1.46
RETREG3-205ENST00000586870 SLFN5Q08AF3 891 aa24.19■■□□□ 1.46
RETREG3-205ENST00000586870 NCBP3Q53F19 620 aaKnown RBP24.18■■□□□ 1.46
RETREG3-205ENST00000586870 DUSP27Q5VZP5 1158 aa24.18■■□□□ 1.46
RETREG3-205ENST00000586870 USHBP1Q8N6Y0 703 aa24.18■■□□□ 1.46
RETREG3-205ENST00000586870 EIF4A2Q14240 407 aaKnown RBP24.17■■□□□ 1.46
RETREG3-205ENST00000586870 TRMT2AQ8IZ69 625 aaKnown RBP24.17■■□□□ 1.46
RETREG3-205ENST00000586870 RAPGEF4Q8WZA2 1011 aa24.16■■□□□ 1.46
RETREG3-205ENST00000586870 PEAK1Q9H792 1746 aa24.15■■□□□ 1.46
RETREG3-205ENST00000586870 COL3A1P02461 1466 aaPredicted RBP24.15■■□□□ 1.46
RETREG3-205ENST00000586870 MAP2P11137 1827 aaKnown RBP24.14■■□□□ 1.45
RETREG3-205ENST00000586870 E9PSI1 815 aa24.13■■□□□ 1.45
RETREG3-205ENST00000586870 FAM182BQ5T319 152 aa24.13■■□□□ 1.45
RETREG3-205ENST00000586870 EYA1Q99502 592 aa24.13■■□□□ 1.45
RETREG3-205ENST00000586870 TATP17735 454 aaPredicted RBP24.13■■□□□ 1.45
RETREG3-205ENST00000586870 DIAPH1O60610 1272 aaKnown RBP24.11■■□□□ 1.45
RETREG3-205ENST00000586870 U2AF1L5P0DN76 240 aaPredicted RBP24.11■■□□□ 1.45
RETREG3-205ENST00000586870 U2AF1Q01081 240 aaKnown RBP eCLIP24.11■■□□□ 1.45
RETREG3-205ENST00000586870 CCDC27Q2M243 656 aa24.1■■□□□ 1.45
RETREG3-205ENST00000586870 B4GALNT3Q6L9W6 998 aa24.1■■□□□ 1.45
RETREG3-205ENST00000586870 FAM196AQ6ZSG2 479 aa24.1■■□□□ 1.45
RETREG3-205ENST00000586870 TSHZ2Q9NRE2 1034 aa24.1■■□□□ 1.45
RETREG3-205ENST00000586870 THSD7AQ9UPZ6 1657 aa24.09■■□□□ 1.45
RETREG3-205ENST00000586870 WWC1Q8IX03 1113 aa24.09■■□□□ 1.45
RETREG3-205ENST00000586870 DISP2A7MBM2 1401 aa24.09■■□□□ 1.45
RETREG3-205ENST00000586870 IL13P35225 146 aa24.08■■□□□ 1.45
RETREG3-205ENST00000586870 UPF1Q92900 1129 aaKnown RBP eCLIP24.08■■□□□ 1.454e-11■■■□□ 19.2
RETREG3-205ENST00000586870 ZCRB1Q8TBF4 217 aaKnown RBP24.07■■□□□ 1.44
RETREG3-205ENST00000586870 DDX54Q8TDD1 881 aaKnown RBP24.07■■□□□ 1.44
RETREG3-205ENST00000586870 FAM208AQ9UK61 1670 aaKnown RBP24.07■■□□□ 1.44
RETREG3-205ENST00000586870 SF3B2Q13435 895 aaKnown RBP24.06■■□□□ 1.44
RETREG3-205ENST00000586870 WDR63Q8IWG1 891 aa24.06■■□□□ 1.44
RETREG3-205ENST00000586870 PNNQ9H307 717 aaKnown RBP24.06■■□□□ 1.44
RETREG3-205ENST00000586870 U2SURPO15042 1029 aaKnown RBP24.05■■□□□ 1.44
RETREG3-205ENST00000586870 MARCH10Q8NA82 808 aaPredicted RBP24.05■■□□□ 1.44
RETREG3-205ENST00000586870 SULT6B1Q6IMI4 303 aa24.04■■□□□ 1.44
RETREG3-205ENST00000586870 CCDC125Q86Z20 511 aa24.04■■□□□ 1.44
RETREG3-205ENST00000586870 SPINK5Q9NQ38 1064 aaPredicted RBP24.04■■□□□ 1.44
RETREG3-205ENST00000586870 IGSF1Q8N6C5 1336 aa24.04■■□□□ 1.44
RETREG3-205ENST00000586870 CCDC136Q96JN2 1154 aa24.03■■□□□ 1.44
RETREG3-205ENST00000586870 SPG7Q9UQ90 795 aa24.02■■□□□ 1.44
RETREG3-205ENST00000586870 TNS2Q63HR2 1409 aa24.02■■□□□ 1.44
RETREG3-205ENST00000586870 BRWD3Q6RI45 1802 aa24.01■■□□□ 1.43
RETREG3-205ENST00000586870 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.01■■□□□ 1.43
RETREG3-205ENST00000586870 PLEKHF1Q96S99 279 aa24.01■■□□□ 1.43
RETREG3-205ENST00000586870 PARP4Q9UKK3 1724 aaKnown RBP24■■□□□ 1.43
RETREG3-205ENST00000586870 MEGF6O75095 1541 aa24■■□□□ 1.43
RETREG3-205ENST00000586870 OVOS2A0A0G2JMS6 1433 aa24■■□□□ 1.43
RETREG3-205ENST00000586870 EXOC6Q8TAG9 804 aa24■■□□□ 1.43
RETREG3-205ENST00000586870 RRP7AQ9Y3A4 280 aaKnown RBP24■■□□□ 1.43
RETREG3-205ENST00000586870 TRIM37O94972 964 aa23.99■■□□□ 1.43
RETREG3-205ENST00000586870 HMOX1P09601 288 aa23.99■■□□□ 1.43
RETREG3-205ENST00000586870 NEUROD2Q15784 382 aa23.99■■□□□ 1.43
RETREG3-205ENST00000586870 AEBP1Q8IUX7 1158 aa23.99■■□□□ 1.43
RETREG3-205ENST00000586870 RGPD2P0DJD1 1756 aa23.98■■□□□ 1.43
RETREG3-205ENST00000586870 LRRC37A3O60309 1634 aa23.97■■□□□ 1.43
RETREG3-205ENST00000586870 PCDH11XQ9BZA7 1347 aa23.97■■□□□ 1.43
RETREG3-205ENST00000586870 PCDH11YQ9BZA8 1340 aa23.97■■□□□ 1.43
RETREG3-205ENST00000586870 MAPK8IP3Q9UPT6 1336 aa23.97■■□□□ 1.43
RETREG3-205ENST00000586870 FCHSD2O94868 740 aa23.97■■□□□ 1.43
RETREG3-205ENST00000586870 PLEKHO1Q53GL0 409 aaPredicted RBP23.97■■□□□ 1.43
RETREG3-205ENST00000586870 PLIN1O60240 522 aa23.96■■□□□ 1.43
RETREG3-205ENST00000586870 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.96■■□□□ 1.43
RETREG3-205ENST00000586870 NCAPD2Q15021 1401 aa23.95■■□□□ 1.43
RETREG3-205ENST00000586870 TMPOP42166 694 aaKnown RBP23.95■■□□□ 1.42
RETREG3-205ENST00000586870 AMOTQ4VCS5 1084 aa23.95■■□□□ 1.42
RETREG3-205ENST00000586870 ACSBG1Q96GR2 724 aa23.94■■□□□ 1.42
RETREG3-205ENST00000586870 WNK3Q9BYP7 1800 aa23.93■■□□□ 1.42
RETREG3-205ENST00000586870 APBA3O96018 575 aa23.92■■□□□ 1.42
RETREG3-205ENST00000586870 BAG6P46379 1132 aa23.92■■□□□ 1.42
RETREG3-205ENST00000586870 MYH16Q9H6N6 1097 aa23.92■■□□□ 1.42
RETREG3-205ENST00000586870 IFNL2Q8IZJ0 200 aa23.92■■□□□ 1.42
RETREG3-205ENST00000586870 SYTL4Q96C24 671 aaPredicted RBP23.92■■□□□ 1.42
RETREG3-205ENST00000586870 EP400Q96L91 3159 aa23.91■■□□□ 1.42
RETREG3-205ENST00000586870 CRBNQ96SW2 442 aa23.91■■□□□ 1.42
RETREG3-205ENST00000586870 BCL11BQ9C0K0 894 aaPredicted RBP23.91■■□□□ 1.42
RETREG3-205ENST00000586870 KDRP35968 1356 aa23.9■■□□□ 1.42
RETREG3-205ENST00000586870 CYP27B1O15528 508 aa23.89■■□□□ 1.42
RETREG3-205ENST00000586870 NEFMP07197 916 aa23.89■■□□□ 1.42
RETREG3-205ENST00000586870 C1orf141Q5JVX7 400 aa23.89■■□□□ 1.42
RETREG3-205ENST00000586870 ZNF530Q6P9A1 599 aaPredicted RBP23.89■■□□□ 1.42
RETREG3-205ENST00000586870 RSPH6AQ9H0K4 717 aa23.89■■□□□ 1.42
RETREG3-205ENST00000586870 DEFB132Q7Z7B7 95 aa23.88■■□□□ 1.41
RETREG3-205ENST00000586870 BCL9O00512 1426 aa23.88■■□□□ 1.41
RETREG3-205ENST00000586870 IL16Q14005 1332 aa23.88■■□□□ 1.41
RETREG3-205ENST00000586870 TRIM35Q9UPQ4 493 aa23.88■■□□□ 1.41
RETREG3-205ENST00000586870 PLEKHG2Q9H7P9 1386 aa23.87■■□□□ 1.41
RETREG3-205ENST00000586870 KCNQ2O43526 872 aa23.87■■□□□ 1.41
RETREG3-205ENST00000586870 PHKG2P15735 406 aa23.87■■□□□ 1.41
RETREG3-205ENST00000586870 PRIM1P49642 420 aaKnown RBP23.86■■□□□ 1.41
RETREG3-205ENST00000586870 HSP90AB1P08238 724 aaKnown RBP23.85■■□□□ 1.41
RETREG3-205ENST00000586870 PRKAR2BP31323 418 aa23.85■■□□□ 1.41
RETREG3-205ENST00000586870 RIPK4P57078 832 aa23.85■■□□□ 1.41
RETREG3-205ENST00000586870 C20orf194Q5TEA3 1177 aa23.85■■□□□ 1.41
RETREG3-205ENST00000586870 EN1Q05925 392 aaPredicted RBP23.84■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms