RNA–Protein interactions for RNA: ENST00000586863.5

ATG4D-206, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 4

Gene ATG4D, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-206ENST00000586863 USHBP1Q8N6Y0 703 aa19.55■□□□□ 0.72
ATG4D-206ENST00000586863 ZCRB1Q8TBF4 217 aaKnown RBP19.55■□□□□ 0.72
ATG4D-206ENST00000586863 MTFR1LQ9H019 292 aa19.55■□□□□ 0.72
ATG4D-206ENST00000586863 QSER1Q2KHR3 1735 aa19.54■□□□□ 0.72
ATG4D-206ENST00000586863 SMG6Q86US8 1419 aaKnown RBP19.54■□□□□ 0.72
ATG4D-206ENST00000586863 NSD3Q9BZ95 1437 aa19.54■□□□□ 0.72
ATG4D-206ENST00000586863 PRIM1P49642 420 aaKnown RBP19.54■□□□□ 0.72
ATG4D-206ENST00000586863 SYTL4Q96C24 671 aaPredicted RBP19.54■□□□□ 0.72
ATG4D-206ENST00000586863 SGIP1Q9BQI5 828 aa19.54■□□□□ 0.72
ATG4D-206ENST00000586863 HSP90AB2PQ58FF8 381 aa19.53■□□□□ 0.72
ATG4D-206ENST00000586863 CARD14Q9BXL6 1004 aa19.53■□□□□ 0.72
ATG4D-206ENST00000586863 YY1P25490 414 aa19.52■□□□□ 0.72
ATG4D-206ENST00000586863 INSRP06213 1382 aa19.52■□□□□ 0.72
ATG4D-206ENST00000586863 FLT4P35916 1363 aa19.52■□□□□ 0.72
ATG4D-206ENST00000586863 SLC27A3Q5K4L6 730 aa19.51■□□□□ 0.71
ATG4D-206ENST00000586863 AKT1S1Q96B36 256 aa19.51■□□□□ 0.71
ATG4D-206ENST00000586863 ANKRD26Q9UPS8 1709 aa19.51■□□□□ 0.71
ATG4D-206ENST00000586863 GOLGB1Q14789 3259 aaKnown RBP19.5■□□□□ 0.71
ATG4D-206ENST00000586863 KIF24Q5T7B8 1368 aa19.5■□□□□ 0.71
ATG4D-206ENST00000586863 KCNQ4P56696 695 aa19.5■□□□□ 0.71
ATG4D-206ENST00000586863 FHDC1Q9C0D6 1143 aaPredicted RBP19.5■□□□□ 0.71
ATG4D-206ENST00000586863 TIMELESSQ9UNS1 1208 aa19.5■□□□□ 0.71
ATG4D-206ENST00000586863 DCAF8L1A6NGE4 600 aa19.49■□□□□ 0.71
ATG4D-206ENST00000586863 CGNL1Q0VF96 1302 aa19.49■□□□□ 0.71
ATG4D-206ENST00000586863 RAPGEF4Q8WZA2 1011 aa19.48■□□□□ 0.71
ATG4D-206ENST00000586863 SYT17Q9BSW7 474 aa19.48■□□□□ 0.71
ATG4D-206ENST00000586863 PCGF6Q9BYE7 350 aa19.48■□□□□ 0.71
ATG4D-206ENST00000586863 EMILIN1Q9Y6C2 1016 aa19.48■□□□□ 0.71
ATG4D-206ENST00000586863 CLSPNQ9HAW4 1339 aa19.48■□□□□ 0.71
ATG4D-206ENST00000586863 COL24A1Q17RW2 1714 aa19.48■□□□□ 0.71
ATG4D-206ENST00000586863 MAP2P11137 1827 aaKnown RBP19.47■□□□□ 0.71
ATG4D-206ENST00000586863 PNPLA7Q6ZV29 1317 aa19.47■□□□□ 0.71
ATG4D-206ENST00000586863 PKD1L3Q7Z443 1732 aa19.46■□□□□ 0.71
ATG4D-206ENST00000586863 TOGARAM1Q9Y4F4 1720 aa19.46■□□□□ 0.71
ATG4D-206ENST00000586863 TATP17735 454 aaPredicted RBP19.46■□□□□ 0.71
ATG4D-206ENST00000586863 ARXQ96QS3 562 aa19.45■□□□□ 0.7
ATG4D-206ENST00000586863 ITGB4P16144 1822 aa19.44■□□□□ 0.7
ATG4D-206ENST00000586863 CCNL1Q9UK58 526 aaPredicted RBP19.44■□□□□ 0.7
ATG4D-206ENST00000586863 PCDH11XQ9BZA7 1347 aa19.44■□□□□ 0.7
ATG4D-206ENST00000586863 PCDH11YQ9BZA8 1340 aa19.44■□□□□ 0.7
ATG4D-206ENST00000586863 NCAPD2Q15021 1401 aa19.43■□□□□ 0.7
ATG4D-206ENST00000586863 TFCP2L1Q9NZI6 479 aa19.43■□□□□ 0.7
ATG4D-206ENST00000586863 MAP3K5Q99683 1374 aa19.43■□□□□ 0.7
ATG4D-206ENST00000586863 C5P01031 1676 aa19.43■□□□□ 0.7
ATG4D-206ENST00000586863 CHD4Q14839 1912 aa19.42■□□□□ 0.7
ATG4D-206ENST00000586863 TAF1LQ8IZX4 1826 aa19.41■□□□□ 0.7
ATG4D-206ENST00000586863 PPM1GO15355 546 aaPredicted RBP19.41■□□□□ 0.7
ATG4D-206ENST00000586863 CYP27B1O15528 508 aa19.41■□□□□ 0.7
ATG4D-206ENST00000586863 SLC16A10Q8TF71 515 aa19.41■□□□□ 0.7
ATG4D-206ENST00000586863 POLR3GLQ9BT43 218 aa19.41■□□□□ 0.7
ATG4D-206ENST00000586863 WASHC2AQ641Q2 1341 aa19.39■□□□□ 0.69
ATG4D-206ENST00000586863 PALLDQ8WX93 1383 aa19.38■□□□□ 0.69
ATG4D-206ENST00000586863 POLD1P28340 1107 aa19.37■□□□□ 0.69
ATG4D-206ENST00000586863 MPRIPQ6WCQ1 1025 aa19.37■□□□□ 0.69
ATG4D-206ENST00000586863 POLKQ9UBT6 870 aa19.37■□□□□ 0.69
ATG4D-206ENST00000586863 EYA1Q99502 592 aa19.36■□□□□ 0.69
ATG4D-206ENST00000586863 HSPA5P11021 654 aaKnown RBP19.35■□□□□ 0.69
ATG4D-206ENST00000586863 COL23A1Q86Y22 540 aaPredicted RBP19.35■□□□□ 0.69
ATG4D-206ENST00000586863 KLHL34Q8N239 644 aa19.35■□□□□ 0.69
ATG4D-206ENST00000586863 TNNT2P45379 298 aaPredicted RBP19.34■□□□□ 0.69
ATG4D-206ENST00000586863 C4BP0C0L5 1744 aa19.34■□□□□ 0.69
ATG4D-206ENST00000586863 EIF4G2P78344 907 aaKnown RBP eCLIP19.33■□□□□ 0.68
ATG4D-206ENST00000586863 MSH5O43196 834 aa19.32■□□□□ 0.68
ATG4D-206ENST00000586863 EIF4A2Q14240 407 aaKnown RBP19.32■□□□□ 0.68
ATG4D-206ENST00000586863 NKX1-1Q15270 411 aaPredicted RBP19.32■□□□□ 0.68
ATG4D-206ENST00000586863 PIGBQ92521 554 aa19.32■□□□□ 0.68
ATG4D-206ENST00000586863 SPG7Q9UQ90 795 aa19.32■□□□□ 0.68
ATG4D-206ENST00000586863 UBR3Q6ZT12 1888 aa19.32■□□□□ 0.68
ATG4D-206ENST00000586863 NLGN2Q8NFZ4 835 aa19.31■□□□□ 0.68
ATG4D-206ENST00000586863 MSL1Q68DK7 614 aa19.3■□□□□ 0.68
ATG4D-206ENST00000586863 ZNF784Q8NCA9 323 aaPredicted RBP19.3■□□□□ 0.68
ATG4D-206ENST00000586863 SMARCC1Q92922 1105 aaPredicted RBP19.3■□□□□ 0.68
ATG4D-206ENST00000586863 PANK3Q9H999 370 aa19.3■□□□□ 0.68
ATG4D-206ENST00000586863 AMIGO3Q86WK7 504 aa19.29■□□□□ 0.68
ATG4D-206ENST00000586863 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.29■□□□□ 0.68
ATG4D-206ENST00000586863 GPR162Q16538 588 aa19.28■□□□□ 0.68
ATG4D-206ENST00000586863 CCER1Q8TC90 406 aaPredicted RBP19.28■□□□□ 0.68
ATG4D-206ENST00000586863 PHKG2P15735 406 aa19.27■□□□□ 0.68
ATG4D-206ENST00000586863 IGSF1Q8N6C5 1336 aa19.26■□□□□ 0.67
ATG4D-206ENST00000586863 IFNL2Q8IZJ0 200 aa19.26■□□□□ 0.67
ATG4D-206ENST00000586863 PELP1Q8IZL8 1130 aaKnown RBP19.26■□□□□ 0.67
ATG4D-206ENST00000586863 TMOD3Q9NYL9 352 aa19.26■□□□□ 0.67
ATG4D-206ENST00000586863 SMIM5Q71RC9 77 aa19.25■□□□□ 0.67
ATG4D-206ENST00000586863 AK7Q96M32 723 aa19.25■□□□□ 0.67
ATG4D-206ENST00000586863 PLEKHG2Q9H7P9 1386 aa19.24■□□□□ 0.67
ATG4D-206ENST00000586863 LOC102724428A0A0B4J2F2 783 aa19.24■□□□□ 0.67
ATG4D-206ENST00000586863 SIK1P57059 783 aa19.24■□□□□ 0.67
ATG4D-206ENST00000586863 LINC00116Q8NCU8 138 aa19.24■□□□□ 0.67
ATG4D-206ENST00000586863 FLAD1Q8NFF5 587 aa19.24■□□□□ 0.67
ATG4D-206ENST00000586863 ASAP1Q9ULH1 1129 aa19.24■□□□□ 0.67
ATG4D-206ENST00000586863 HMGB2P26583 209 aaKnown RBP19.23■□□□□ 0.67
ATG4D-206ENST00000586863 PHF14O94880 888 aa19.22■□□□□ 0.67
ATG4D-206ENST00000586863 ITPK1Q13572 414 aa19.22■□□□□ 0.67
ATG4D-206ENST00000586863 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.21■□□□□ 0.67
ATG4D-206ENST00000586863 YBX3P16989 372 aaKnown RBP eCLIP19.21■□□□□ 0.67
ATG4D-206ENST00000586863 MORC1Q86VD1 984 aa19.2■□□□□ 0.66
ATG4D-206ENST00000586863 ATG3Q9NT62 314 aa19.2■□□□□ 0.66
ATG4D-206ENST00000586863 KDRP35968 1356 aa19.19■□□□□ 0.66
ATG4D-206ENST00000586863 KDM6AO15550 1401 aaPredicted RBP19.19■□□□□ 0.66
ATG4D-206ENST00000586863 AEBP1Q8IUX7 1158 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms