RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 TATP17735 454 aaPredicted RBP23.43■■□□□ 1.34
TRIM47-203ENST00000586495 PPP1R1BQ9UD71 204 aaPredicted RBP23.43■■□□□ 1.34
TRIM47-203ENST00000586495 USHBP1Q8N6Y0 703 aa23.42■■□□□ 1.34
TRIM47-203ENST00000586495 MEGF6O75095 1541 aa23.42■■□□□ 1.34
TRIM47-203ENST00000586495 EMILIN1Q9Y6C2 1016 aa23.41■■□□□ 1.34
TRIM47-203ENST00000586495 BTAF1O14981 1849 aa23.4■■□□□ 1.34
TRIM47-203ENST00000586495 PPM1GO15355 546 aaPredicted RBP23.4■■□□□ 1.34
TRIM47-203ENST00000586495 SYTL4Q96C24 671 aaPredicted RBP23.4■■□□□ 1.34
TRIM47-203ENST00000586495 PRIM1P49642 420 aaKnown RBP23.38■■□□□ 1.33
TRIM47-203ENST00000586495 SLC27A3Q5K4L6 730 aa23.37■■□□□ 1.33
TRIM47-203ENST00000586495 WASHC2AQ641Q2 1341 aa23.36■■□□□ 1.33
TRIM47-203ENST00000586495 CASZ1Q86V15 1759 aa23.35■■□□□ 1.33
TRIM47-203ENST00000586495 ZBTB7AO95365 584 aa23.35■■□□□ 1.33
TRIM47-203ENST00000586495 PDGFDQ9GZP0 370 aaPredicted RBP23.35■■□□□ 1.33
TRIM47-203ENST00000586495 PCDH11XQ9BZA7 1347 aa23.34■■□□□ 1.33
TRIM47-203ENST00000586495 PCDH11YQ9BZA8 1340 aa23.34■■□□□ 1.33
TRIM47-203ENST00000586495 PANK3Q9H999 370 aa23.34■■□□□ 1.33
TRIM47-203ENST00000586495 LRRC4BQ9NT99 713 aa23.34■■□□□ 1.33
TRIM47-203ENST00000586495 POLKQ9UBT6 870 aa23.33■■□□□ 1.33
TRIM47-203ENST00000586495 SHANK3Q9BYB0 1731 aa23.33■■□□□ 1.32
TRIM47-203ENST00000586495 MAP2P11137 1827 aaKnown RBP23.31■■□□□ 1.32
TRIM47-203ENST00000586495 DOT1LQ8TEK3 1739 aa23.31■■□□□ 1.32
TRIM47-203ENST00000586495 MTFR1LQ9H019 292 aa23.31■■□□□ 1.32
TRIM47-203ENST00000586495 ATF5Q9Y2D1 282 aaPredicted RBP23.31■■□□□ 1.32
TRIM47-203ENST00000586495 TNNT2P45379 298 aaPredicted RBP23.3■■□□□ 1.32
TRIM47-203ENST00000586495 PAPPAQ13219 1627 aa23.3■■□□□ 1.32
TRIM47-203ENST00000586495 NSD2O96028 1365 aa23.29■■□□□ 1.32
TRIM47-203ENST00000586495 ANKRD26Q9UPS8 1709 aa23.29■■□□□ 1.32
TRIM47-203ENST00000586495 NCAPD2Q15021 1401 aa23.28■■□□□ 1.32
TRIM47-203ENST00000586495 DCAF8L1A6NGE4 600 aa23.28■■□□□ 1.32
TRIM47-203ENST00000586495 ZNF827Q17R98 1081 aa23.28■■□□□ 1.32
TRIM47-203ENST00000586495 AKT1S1Q96B36 256 aa23.28■■□□□ 1.32
TRIM47-203ENST00000586495 EYA1Q99502 592 aa23.28■■□□□ 1.32
TRIM47-203ENST00000586495 SPG7Q9UQ90 795 aa23.28■■□□□ 1.32
TRIM47-203ENST00000586495 CYP27B1O15528 508 aa23.27■■□□□ 1.32
TRIM47-203ENST00000586495 PTGER2P43116 358 aa23.27■■□□□ 1.32
TRIM47-203ENST00000586495 HMGB2P26583 209 aaKnown RBP23.26■■□□□ 1.31
TRIM47-203ENST00000586495 CCNL1Q9UK58 526 aaPredicted RBP23.26■■□□□ 1.31
TRIM47-203ENST00000586495 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.25■■□□□ 1.31
TRIM47-203ENST00000586495 KNSTRNQ9Y448 316 aa23.25■■□□□ 1.31
TRIM47-203ENST00000586495 EIF4A2Q14240 407 aaKnown RBP23.24■■□□□ 1.31
TRIM47-203ENST00000586495 SLC16A10Q8TF71 515 aa23.24■■□□□ 1.31
TRIM47-203ENST00000586495 TFCP2L1Q9NZI6 479 aa23.24■■□□□ 1.31
TRIM47-203ENST00000586495 KCNQ4P56696 695 aa23.23■■□□□ 1.31
TRIM47-203ENST00000586495 MORC1Q86VD1 984 aa23.23■■□□□ 1.31
TRIM47-203ENST00000586495 LY75O60449 1722 aa23.22■■□□□ 1.31
TRIM47-203ENST00000586495 MPRIPQ6WCQ1 1025 aa23.22■■□□□ 1.31
TRIM47-203ENST00000586495 NKX1-1Q15270 411 aaPredicted RBP23.21■■□□□ 1.31
TRIM47-203ENST00000586495 SGIP1Q9BQI5 828 aa23.21■■□□□ 1.31
TRIM47-203ENST00000586495 PKD1L3Q7Z443 1732 aa23.21■■□□□ 1.31
TRIM47-203ENST00000586495 SMARCC1Q92922 1105 aaPredicted RBP23.2■■□□□ 1.3
TRIM47-203ENST00000586495 PNPLA7Q6ZV29 1317 aa23.19■■□□□ 1.3
TRIM47-203ENST00000586495 IFNL2Q8IZJ0 200 aa23.19■■□□□ 1.3
TRIM47-203ENST00000586495 PLEKHG2Q9H7P9 1386 aa23.18■■□□□ 1.3
TRIM47-203ENST00000586495 KIF7Q2M1P5 1343 aa23.18■■□□□ 1.3
TRIM47-203ENST00000586495 ARXQ96QS3 562 aa23.18■■□□□ 1.3
TRIM47-203ENST00000586495 PALLDQ8WX93 1383 aa23.17■■□□□ 1.3
TRIM47-203ENST00000586495 QSER1Q2KHR3 1735 aa23.17■■□□□ 1.3
TRIM47-203ENST00000586495 IGSF1Q8N6C5 1336 aa23.17■■□□□ 1.3
TRIM47-203ENST00000586495 FHDC1Q9C0D6 1143 aaPredicted RBP23.17■■□□□ 1.3
TRIM47-203ENST00000586495 POLD1P28340 1107 aa23.16■■□□□ 1.3
TRIM47-203ENST00000586495 SYT17Q9BSW7 474 aa23.16■■□□□ 1.3
TRIM47-203ENST00000586495 PHKG2P15735 406 aa23.15■■□□□ 1.3
TRIM47-203ENST00000586495 PIGBQ92521 554 aa23.15■■□□□ 1.3
TRIM47-203ENST00000586495 TMOD3Q9NYL9 352 aa23.13■■□□□ 1.29
TRIM47-203ENST00000586495 ITGB4P16144 1822 aa23.12■■□□□ 1.29
TRIM47-203ENST00000586495 MSH5O43196 834 aa23.12■■□□□ 1.29
TRIM47-203ENST00000586495 PLEKHO1Q53GL0 409 aaPredicted RBP23.12■■□□□ 1.29
TRIM47-203ENST00000586495 AMER1Q5JTC6 1135 aaPredicted RBP23.12■■□□□ 1.29
TRIM47-203ENST00000586495 TOGARAM1Q9Y4F4 1720 aa23.12■■□□□ 1.29
TRIM47-203ENST00000586495 FLAD1Q8NFF5 587 aa23.11■■□□□ 1.29
TRIM47-203ENST00000586495 HSP90AB1P08238 724 aaKnown RBP23.1■■□□□ 1.29
TRIM47-203ENST00000586495 YY1P25490 414 aa23.1■■□□□ 1.29
TRIM47-203ENST00000586495 AMOTQ4VCS5 1084 aa23.1■■□□□ 1.29
TRIM47-203ENST00000586495 MAP3K5Q99683 1374 aa23.1■■□□□ 1.29
TRIM47-203ENST00000586495 TUBGCP6Q96RT7 1819 aa23.1■■□□□ 1.29
TRIM47-203ENST00000586495 COL23A1Q86Y22 540 aaPredicted RBP23.09■■□□□ 1.29
TRIM47-203ENST00000586495 AK7Q96M32 723 aa23.08■■□□□ 1.29
TRIM47-203ENST00000586495 C5P01031 1676 aa23.07■■□□□ 1.28
TRIM47-203ENST00000586495 LOC102724428A0A0B4J2F2 783 aa23.07■■□□□ 1.28
TRIM47-203ENST00000586495 SIK1P57059 783 aa23.07■■□□□ 1.28
TRIM47-203ENST00000586495 DCAF5Q96JK2 942 aa23.07■■□□□ 1.28
TRIM47-203ENST00000586495 ERVV-2B6SEH9 535 aa23.06■■□□□ 1.28
TRIM47-203ENST00000586495 PER1O15534 1290 aaPredicted RBP23.06■■□□□ 1.28
TRIM47-203ENST00000586495 ZNF530Q6P9A1 599 aaPredicted RBP23.06■■□□□ 1.28
TRIM47-203ENST00000586495 ASAP1Q9ULH1 1129 aa23.06■■□□□ 1.28
TRIM47-203ENST00000586495 IL13P35225 146 aa23.05■■□□□ 1.28
TRIM47-203ENST00000586495 SULT6B1Q6IMI4 303 aa23.05■■□□□ 1.28
TRIM47-203ENST00000586495 KLHL34Q8N239 644 aa23.05■■□□□ 1.28
TRIM47-203ENST00000586495 TAF1LQ8IZX4 1826 aa23.05■■□□□ 1.28
TRIM47-203ENST00000586495 C1orf141Q5JVX7 400 aa23.04■■□□□ 1.28
TRIM47-203ENST00000586495 COL24A1Q17RW2 1714 aa23.04■■□□□ 1.28
TRIM47-203ENST00000586495 MTHFSP49914 203 aa23.03■■□□□ 1.28
TRIM47-203ENST00000586495 AEBP1Q8IUX7 1158 aa23.03■■□□□ 1.28
TRIM47-203ENST00000586495 ATG3Q9NT62 314 aa23.03■■□□□ 1.28
TRIM47-203ENST00000586495 ATP6V1AP38606 617 aa23.02■■□□□ 1.28
TRIM47-203ENST00000586495 CC2D1BQ5T0F9 858 aaKnown RBP23.02■■□□□ 1.28
TRIM47-203ENST00000586495 C4BP0C0L5 1744 aa23.02■■□□□ 1.28
TRIM47-203ENST00000586495 KDRP35968 1356 aa23.01■■□□□ 1.27
TRIM47-203ENST00000586495 CABP4P57796 275 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms