RNA–Protein interactions for RNA: ENST00000585967.5

MBD3-204, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 4

Gene MBD3, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-204ENST00000585967 INSRP06213 1382 aa23.61■■□□□ 1.37
MBD3-204ENST00000585967 MEGF6O75095 1541 aa23.6■■□□□ 1.37
MBD3-204ENST00000585967 ZCRB1Q8TBF4 217 aaKnown RBP23.6■■□□□ 1.37
MBD3-204ENST00000585967 SLC27A3Q5K4L6 730 aa23.58■■□□□ 1.37
MBD3-204ENST00000585967 SYTL4Q96C24 671 aaPredicted RBP23.57■■□□□ 1.36
MBD3-204ENST00000585967 PKD1L3Q7Z443 1732 aa23.56■■□□□ 1.36
MBD3-204ENST00000585967 TATP17735 454 aaPredicted RBP23.56■■□□□ 1.36
MBD3-204ENST00000585967 FBLN1P23142 703 aa23.56■■□□□ 1.36
MBD3-204ENST00000585967 HMGB2P26583 209 aaKnown RBP23.56■■□□□ 1.36
MBD3-204ENST00000585967 MTFR1LQ9H019 292 aa23.55■■□□□ 1.36
MBD3-204ENST00000585967 ZBTB7AO95365 584 aa23.54■■□□□ 1.36
MBD3-204ENST00000585967 CCER1Q8TC90 406 aaPredicted RBP23.54■■□□□ 1.36
MBD3-204ENST00000585967 PCDH11XQ9BZA7 1347 aa23.54■■□□□ 1.36
MBD3-204ENST00000585967 PCDH11YQ9BZA8 1340 aa23.54■■□□□ 1.36
MBD3-204ENST00000585967 TUBGCP6Q96RT7 1819 aa23.54■■□□□ 1.36
MBD3-204ENST00000585967 EIF4G2P78344 907 aaKnown RBP eCLIP23.53■■□□□ 1.36
MBD3-204ENST00000585967 NBPF6Q5VWK0 638 aa23.53■■□□□ 1.36
MBD3-204ENST00000585967 NBPF4Q96M43 638 aa23.53■■□□□ 1.36
MBD3-204ENST00000585967 ITGB4P16144 1822 aa23.52■■□□□ 1.36
MBD3-204ENST00000585967 POLR3GLQ9BT43 218 aa23.52■■□□□ 1.36
MBD3-204ENST00000585967 HSP90AB2PQ58FF8 381 aa23.51■■□□□ 1.35
MBD3-204ENST00000585967 CARD14Q9BXL6 1004 aa23.5■■□□□ 1.35
MBD3-204ENST00000585967 C5P01031 1676 aa23.5■■□□□ 1.35
MBD3-204ENST00000585967 PRIM1P49642 420 aaKnown RBP23.49■■□□□ 1.35
MBD3-204ENST00000585967 USHBP1Q8N6Y0 703 aa23.49■■□□□ 1.35
MBD3-204ENST00000585967 PPM1GO15355 546 aaPredicted RBP23.48■■□□□ 1.35
MBD3-204ENST00000585967 ATF5Q9Y2D1 282 aaPredicted RBP23.48■■□□□ 1.35
MBD3-204ENST00000585967 TAF1LQ8IZX4 1826 aa23.47■■□□□ 1.35
MBD3-204ENST00000585967 PDGFDQ9GZP0 370 aaPredicted RBP23.47■■□□□ 1.35
MBD3-204ENST00000585967 CHD4Q14839 1912 aa23.47■■□□□ 1.35
MBD3-204ENST00000585967 COL24A1Q17RW2 1714 aa23.46■■□□□ 1.35
MBD3-204ENST00000585967 SLC16A10Q8TF71 515 aa23.46■■□□□ 1.35
MBD3-204ENST00000585967 EMILIN1Q9Y6C2 1016 aa23.46■■□□□ 1.35
MBD3-204ENST00000585967 NSD2O96028 1365 aa23.45■■□□□ 1.34
MBD3-204ENST00000585967 PTGER2P43116 358 aa23.45■■□□□ 1.34
MBD3-204ENST00000585967 TOGARAM1Q9Y4F4 1720 aa23.45■■□□□ 1.34
MBD3-204ENST00000585967 NCAPD2Q15021 1401 aa23.44■■□□□ 1.34
MBD3-204ENST00000585967 WASHC2AQ641Q2 1341 aa23.44■■□□□ 1.34
MBD3-204ENST00000585967 LRRC4BQ9NT99 713 aa23.44■■□□□ 1.34
MBD3-204ENST00000585967 CCNL1Q9UK58 526 aaPredicted RBP23.44■■□□□ 1.34
MBD3-204ENST00000585967 ZNF827Q17R98 1081 aa23.43■■□□□ 1.34
MBD3-204ENST00000585967 TFCP2L1Q9NZI6 479 aa23.43■■□□□ 1.34
MBD3-204ENST00000585967 PLEKHG2Q9H7P9 1386 aa23.42■■□□□ 1.34
MBD3-204ENST00000585967 POLD1P28340 1107 aa23.42■■□□□ 1.34
MBD3-204ENST00000585967 AKT1S1Q96B36 256 aa23.42■■□□□ 1.34
MBD3-204ENST00000585967 SPG7Q9UQ90 795 aa23.42■■□□□ 1.34
MBD3-204ENST00000585967 HSPA5P11021 654 aaKnown RBP23.41■■□□□ 1.34
MBD3-204ENST00000585967 YY1P25490 414 aa23.4■■□□□ 1.34
MBD3-204ENST00000585967 ARXQ96QS3 562 aa23.4■■□□□ 1.34
MBD3-204ENST00000585967 MAP3K5Q99683 1374 aa23.4■■□□□ 1.34
MBD3-204ENST00000585967 FHDC1Q9C0D6 1143 aaPredicted RBP23.39■■□□□ 1.33
MBD3-204ENST00000585967 SMARCC1Q92922 1105 aaPredicted RBP23.38■■□□□ 1.33
MBD3-204ENST00000585967 SGIP1Q9BQI5 828 aa23.37■■□□□ 1.33
MBD3-204ENST00000585967 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.37■■□□□ 1.33
MBD3-204ENST00000585967 PNPLA7Q6ZV29 1317 aa23.36■■□□□ 1.33
MBD3-204ENST00000585967 MPRIPQ6WCQ1 1025 aa23.36■■□□□ 1.33
MBD3-204ENST00000585967 SYT17Q9BSW7 474 aa23.36■■□□□ 1.33
MBD3-204ENST00000585967 POLKQ9UBT6 870 aa23.36■■□□□ 1.33
MBD3-204ENST00000585967 PALLDQ8WX93 1383 aa23.36■■□□□ 1.33
MBD3-204ENST00000585967 C4BP0C0L5 1744 aa23.35■■□□□ 1.33
MBD3-204ENST00000585967 CYP27B1O15528 508 aa23.34■■□□□ 1.33
MBD3-204ENST00000585967 TNNT2P45379 298 aaPredicted RBP23.34■■□□□ 1.33
MBD3-204ENST00000585967 PANK3Q9H999 370 aa23.34■■□□□ 1.33
MBD3-204ENST00000585967 FLAD1Q8NFF5 587 aa23.33■■□□□ 1.33
MBD3-204ENST00000585967 EYA1Q99502 592 aa23.33■■□□□ 1.33
MBD3-204ENST00000585967 MSH5O43196 834 aa23.32■■□□□ 1.32
MBD3-204ENST00000585967 UBR3Q6ZT12 1888 aa23.32■■□□□ 1.32
MBD3-204ENST00000585967 KCNQ4P56696 695 aa23.31■■□□□ 1.32
MBD3-204ENST00000585967 NKX1-1Q15270 411 aaPredicted RBP23.31■■□□□ 1.32
MBD3-204ENST00000585967 IFNL2Q8IZJ0 200 aa23.31■■□□□ 1.32
MBD3-204ENST00000585967 KNSTRNQ9Y448 316 aa23.31■■□□□ 1.32
MBD3-204ENST00000585967 TMOD3Q9NYL9 352 aa23.3■■□□□ 1.32
MBD3-204ENST00000585967 EIF4A2Q14240 407 aaKnown RBP23.29■■□□□ 1.32
MBD3-204ENST00000585967 MORC1Q86VD1 984 aa23.29■■□□□ 1.32
MBD3-204ENST00000585967 KLHL34Q8N239 644 aa23.29■■□□□ 1.32
MBD3-204ENST00000585967 AK7Q96M32 723 aa23.27■■□□□ 1.32
MBD3-204ENST00000585967 IGSF1Q8N6C5 1336 aa23.27■■□□□ 1.32
MBD3-204ENST00000585967 ZNF831Q5JPB2 1677 aa23.26■■□□□ 1.31
MBD3-204ENST00000585967 HSP90AB1P08238 724 aaKnown RBP23.26■■□□□ 1.31
MBD3-204ENST00000585967 PHKG2P15735 406 aa23.25■■□□□ 1.31
MBD3-204ENST00000585967 PIGBQ92521 554 aa23.24■■□□□ 1.31
MBD3-204ENST00000585967 PLEKHO1Q53GL0 409 aaPredicted RBP23.23■■□□□ 1.31
MBD3-204ENST00000585967 VIRMAQ69YN4 1812 aaKnown RBP23.23■■□□□ 1.31
MBD3-204ENST00000585967 UTRNP46939 3433 aa23.22■■□□□ 1.31
MBD3-204ENST00000585967 GPR162Q16538 588 aa23.22■■□□□ 1.31
MBD3-204ENST00000585967 AMOTQ4VCS5 1084 aa23.22■■□□□ 1.31
MBD3-204ENST00000585967 COL23A1Q86Y22 540 aaPredicted RBP23.22■■□□□ 1.31
MBD3-204ENST00000585967 LOC102724428A0A0B4J2F2 783 aa23.2■■□□□ 1.3
MBD3-204ENST00000585967 SIK1P57059 783 aa23.2■■□□□ 1.3
MBD3-204ENST00000585967 SCN11AQ9UI33 1791 aa23.19■■□□□ 1.3
MBD3-204ENST00000585967 DCAF5Q96JK2 942 aa23.19■■□□□ 1.3
MBD3-204ENST00000585967 COL5A3P25940 1745 aaPredicted RBP23.19■■□□□ 1.3
MBD3-204ENST00000585967 ERVV-2B6SEH9 535 aa23.18■■□□□ 1.3
MBD3-204ENST00000585967 SSFA2P28290 1259 aa23.18■■□□□ 1.3
MBD3-204ENST00000585967 C1orf141Q5JVX7 400 aa23.18■■□□□ 1.3
MBD3-204ENST00000585967 KIF7Q2M1P5 1343 aa23.17■■□□□ 1.3
MBD3-204ENST00000585967 ZNF530Q6P9A1 599 aaPredicted RBP23.17■■□□□ 1.3
MBD3-204ENST00000585967 ATP6V1AP38606 617 aa23.16■■□□□ 1.3
MBD3-204ENST00000585967 PELP1Q8IZL8 1130 aaKnown RBP23.16■■□□□ 1.3
MBD3-204ENST00000585967 MSL1Q68DK7 614 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms