RNA–Protein interactions for RNA: ENST00000585854.1

CHAF1A-203, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 2

Gene CHAF1A, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-203ENST00000585854 SYT17Q9BSW7 474 aa28.46■■■□□ 2.15
CHAF1A-203ENST00000585854 RTL1A6NKG5 1358 aa28.46■■■□□ 2.15
CHAF1A-203ENST00000585854 KCNQ4P56696 695 aa28.45■■■□□ 2.14
CHAF1A-203ENST00000585854 SMG6Q86US8 1419 aaKnown RBP28.44■■■□□ 2.14
CHAF1A-203ENST00000585854 SLC27A3Q5K4L6 730 aa28.44■■■□□ 2.14
CHAF1A-203ENST00000585854 NBPF6Q5VWK0 638 aa28.44■■■□□ 2.14
CHAF1A-203ENST00000585854 NBPF4Q96M43 638 aa28.44■■■□□ 2.14
CHAF1A-203ENST00000585854 ARXQ96QS3 562 aa28.44■■■□□ 2.14
CHAF1A-203ENST00000585854 SGIP1Q9BQI5 828 aa28.44■■■□□ 2.14
CHAF1A-203ENST00000585854 CDCA8Q53HL2 280 aa28.43■■■□□ 2.14
CHAF1A-203ENST00000585854 TUBGCP6Q96RT7 1819 aa28.42■■■□□ 2.14
CHAF1A-203ENST00000585854 LY75O60449 1722 aa28.41■■■□□ 2.14
CHAF1A-203ENST00000585854 QSER1Q2KHR3 1735 aa28.41■■■□□ 2.14
CHAF1A-203ENST00000585854 RAPGEF4Q8WZA2 1011 aa28.41■■■□□ 2.14
CHAF1A-203ENST00000585854 AKT1S1Q96B36 256 aa28.41■■■□□ 2.14
CHAF1A-203ENST00000585854 KLHL34Q8N239 644 aa28.4■■■□□ 2.14
CHAF1A-203ENST00000585854 TFCP2L1Q9NZI6 479 aa28.4■■■□□ 2.14
CHAF1A-203ENST00000585854 TATP17735 454 aaPredicted RBP28.38■■■□□ 2.13
CHAF1A-203ENST00000585854 HSP90AB2PQ58FF8 381 aa28.38■■■□□ 2.13
CHAF1A-203ENST00000585854 NSD2O96028 1365 aa28.37■■■□□ 2.13
CHAF1A-203ENST00000585854 CHD4Q14839 1912 aa28.36■■■□□ 2.13
CHAF1A-203ENST00000585854 CCNL1Q9UK58 526 aaPredicted RBP28.36■■■□□ 2.13
CHAF1A-203ENST00000585854 PNPLA7Q6ZV29 1317 aa28.36■■■□□ 2.13
CHAF1A-203ENST00000585854 CGNL1Q0VF96 1302 aa28.35■■■□□ 2.13
CHAF1A-203ENST00000585854 INSRP06213 1382 aa28.35■■■□□ 2.13
CHAF1A-203ENST00000585854 FLT4P35916 1363 aa28.35■■■□□ 2.13
CHAF1A-203ENST00000585854 POLD1P28340 1107 aa28.34■■■□□ 2.13
CHAF1A-203ENST00000585854 SLC16A10Q8TF71 515 aa28.34■■■□□ 2.13
CHAF1A-203ENST00000585854 NSD3Q9BZ95 1437 aa28.34■■■□□ 2.13
CHAF1A-203ENST00000585854 MSH5O43196 834 aa28.32■■■□□ 2.12
CHAF1A-203ENST00000585854 PPM1GO15355 546 aaPredicted RBP28.31■■■□□ 2.12
CHAF1A-203ENST00000585854 CARD14Q9BXL6 1004 aa28.31■■■□□ 2.12
CHAF1A-203ENST00000585854 EMILIN1Q9Y6C2 1016 aa28.3■■■□□ 2.12
CHAF1A-203ENST00000585854 PCDH11XQ9BZA7 1347 aa28.29■■■□□ 2.12
CHAF1A-203ENST00000585854 PCDH11YQ9BZA8 1340 aa28.29■■■□□ 2.12
CHAF1A-203ENST00000585854 POLR3GLQ9BT43 218 aa28.29■■■□□ 2.12
CHAF1A-203ENST00000585854 MAP2P11137 1827 aaKnown RBP28.28■■■□□ 2.12
CHAF1A-203ENST00000585854 KIF24Q5T7B8 1368 aa28.27■■■□□ 2.12
CHAF1A-203ENST00000585854 MAP3K5Q99683 1374 aa28.27■■■□□ 2.12
CHAF1A-203ENST00000585854 COL24A1Q17RW2 1714 aa28.27■■■□□ 2.12
CHAF1A-203ENST00000585854 GPR162Q16538 588 aa28.27■■■□□ 2.12
CHAF1A-203ENST00000585854 PELP1Q8IZL8 1130 aaKnown RBP28.27■■■□□ 2.12
CHAF1A-203ENST00000585854 PCGF6Q9BYE7 350 aa28.27■■■□□ 2.12
CHAF1A-203ENST00000585854 ITGB4P16144 1822 aa28.26■■■□□ 2.11
CHAF1A-203ENST00000585854 MPRIPQ6WCQ1 1025 aa28.25■■■□□ 2.11
CHAF1A-203ENST00000585854 C5P01031 1676 aa28.25■■■□□ 2.11
CHAF1A-203ENST00000585854 ZNF784Q8NCA9 323 aaPredicted RBP28.24■■■□□ 2.11
CHAF1A-203ENST00000585854 TAF1LQ8IZX4 1826 aa28.22■■■□□ 2.11
CHAF1A-203ENST00000585854 COL23A1Q86Y22 540 aaPredicted RBP28.22■■■□□ 2.11
CHAF1A-203ENST00000585854 TOGARAM1Q9Y4F4 1720 aa28.22■■■□□ 2.11
CHAF1A-203ENST00000585854 PKD1L3Q7Z443 1732 aa28.21■■■□□ 2.11
CHAF1A-203ENST00000585854 CYP27B1O15528 508 aa28.21■■■□□ 2.11
CHAF1A-203ENST00000585854 PALLDQ8WX93 1383 aa28.21■■■□□ 2.11
CHAF1A-203ENST00000585854 MSL1Q68DK7 614 aa28.2■■■□□ 2.1
CHAF1A-203ENST00000585854 TIMELESSQ9UNS1 1208 aa28.2■■■□□ 2.1
CHAF1A-203ENST00000585854 ANKRD26Q9UPS8 1709 aa28.2■■■□□ 2.1
CHAF1A-203ENST00000585854 NLGN2Q8NFZ4 835 aa28.18■■■□□ 2.1
CHAF1A-203ENST00000585854 UTRNP46939 3433 aa28.18■■■□□ 2.1
CHAF1A-203ENST00000585854 TNNT2P45379 298 aaPredicted RBP28.16■■■□□ 2.1
CHAF1A-203ENST00000585854 SPG7Q9UQ90 795 aa28.16■■■□□ 2.1
CHAF1A-203ENST00000585854 WASHC2AQ641Q2 1341 aa28.15■■■□□ 2.1
CHAF1A-203ENST00000585854 SMARCC1Q92922 1105 aaPredicted RBP28.14■■■□□ 2.1
CHAF1A-203ENST00000585854 EYA1Q99502 592 aa28.14■■■□□ 2.1
CHAF1A-203ENST00000585854 C4BP0C0L5 1744 aa28.12■■■□□ 2.09
CHAF1A-203ENST00000585854 AK7Q96M32 723 aa28.12■■■□□ 2.09
CHAF1A-203ENST00000585854 NCAPD2Q15021 1401 aa28.11■■■□□ 2.09
CHAF1A-203ENST00000585854 HMGB2P26583 209 aaKnown RBP28.11■■■□□ 2.09
CHAF1A-203ENST00000585854 PIGBQ92521 554 aa28.11■■■□□ 2.09
CHAF1A-203ENST00000585854 POLKQ9UBT6 870 aa28.11■■■□□ 2.09
CHAF1A-203ENST00000585854 FLAD1Q8NFF5 587 aa28.1■■■□□ 2.09
CHAF1A-203ENST00000585854 CLSPNQ9HAW4 1339 aa28.1■■■□□ 2.09
CHAF1A-203ENST00000585854 PHF14O94880 888 aa28.08■■■□□ 2.09
CHAF1A-203ENST00000585854 UBR3Q6ZT12 1888 aa28.08■■■□□ 2.09
CHAF1A-203ENST00000585854 NKX1-1Q15270 411 aaPredicted RBP28.07■■■□□ 2.08
CHAF1A-203ENST00000585854 TMOD3Q9NYL9 352 aa28.07■■■□□ 2.08
CHAF1A-203ENST00000585854 EIF4G2P78344 907 aaKnown RBP eCLIP28.05■■■□□ 2.08
CHAF1A-203ENST00000585854 EIF4A2Q14240 407 aaKnown RBP28.05■■■□□ 2.08
CHAF1A-203ENST00000585854 SMIM5Q71RC9 77 aa28.05■■■□□ 2.08
CHAF1A-203ENST00000585854 IFNL2Q8IZJ0 200 aa28.05■■■□□ 2.08
CHAF1A-203ENST00000585854 LOC102724428A0A0B4J2F2 783 aa28.03■■■□□ 2.08
CHAF1A-203ENST00000585854 HSPA5P11021 654 aaKnown RBP28.03■■■□□ 2.08
CHAF1A-203ENST00000585854 PHKG2P15735 406 aa28.03■■■□□ 2.08
CHAF1A-203ENST00000585854 YBX3P16989 372 aaKnown RBP eCLIP28.03■■■□□ 2.08
CHAF1A-203ENST00000585854 SIK1P57059 783 aa28.03■■■□□ 2.08
CHAF1A-203ENST00000585854 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.03■■■□□ 2.084e-6■□□□□ 11.2
CHAF1A-203ENST00000585854 AMIGO3Q86WK7 504 aa28.02■■■□□ 2.08
CHAF1A-203ENST00000585854 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.01■■■□□ 2.07
CHAF1A-203ENST00000585854 PANK3Q9H999 370 aa28.01■■■□□ 2.07
CHAF1A-203ENST00000585854 ASAP1Q9ULH1 1129 aa28.01■■■□□ 2.07
CHAF1A-203ENST00000585854 GRIN3BO60391 1043 aa28■■■□□ 2.07
CHAF1A-203ENST00000585854 LINC00116Q8NCU8 138 aa28■■■□□ 2.07
CHAF1A-203ENST00000585854 ATP6V1AP38606 617 aa27.98■■■□□ 2.07
CHAF1A-203ENST00000585854 CD2APQ9Y5K6 639 aa27.98■■■□□ 2.07
CHAF1A-203ENST00000585854 GOLGB1Q14789 3259 aaKnown RBP27.97■■■□□ 2.07
CHAF1A-203ENST00000585854 SENP3-EIF4A1A0A087X0R7 540 aa27.96■■■□□ 2.07
CHAF1A-203ENST00000585854 GNPATO15228 680 aa27.96■■■□□ 2.07
CHAF1A-203ENST00000585854 C1QTNF8P60827 252 aa27.96■■■□□ 2.07
CHAF1A-203ENST00000585854 CCER1Q8TC90 406 aaPredicted RBP27.96■■■□□ 2.07
CHAF1A-203ENST00000585854 SSFA2P28290 1259 aa27.95■■■□□ 2.06
CHAF1A-203ENST00000585854 ITPK1Q13572 414 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms