RNA–Protein interactions for RNA: ENST00000585728.5

GFAP-206, Transcript of glial fibrillary acidic protein, humanhuman

TSL 3

Gene GFAP, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFAP-206ENST00000585728 TIMELESSQ9UNS1 1208 aa17.83■□□□□ 0.44
GFAP-206ENST00000585728 ZCRB1Q8TBF4 217 aaKnown RBP17.82■□□□□ 0.44
GFAP-206ENST00000585728 LRRC4BQ9NT99 713 aa17.82■□□□□ 0.44
GFAP-206ENST00000585728 SMG6Q86US8 1419 aaKnown RBP17.81■□□□□ 0.44
GFAP-206ENST00000585728 COL24A1Q17RW2 1714 aa17.81■□□□□ 0.44
GFAP-206ENST00000585728 SLC27A3Q5K4L6 730 aa17.81■□□□□ 0.44
GFAP-206ENST00000585728 NBPF6Q5VWK0 638 aa17.81■□□□□ 0.44
GFAP-206ENST00000585728 NBPF4Q96M43 638 aa17.81■□□□□ 0.44
GFAP-206ENST00000585728 SGIP1Q9BQI5 828 aa17.81■□□□□ 0.44
GFAP-206ENST00000585728 MAP2P11137 1827 aaKnown RBP17.81■□□□□ 0.44
GFAP-206ENST00000585728 KIF24Q5T7B8 1368 aa17.8■□□□□ 0.44
GFAP-206ENST00000585728 CGNL1Q0VF96 1302 aa17.8■□□□□ 0.44
GFAP-206ENST00000585728 ZNF827Q17R98 1081 aa17.8■□□□□ 0.44
GFAP-206ENST00000585728 ANKRD26Q9UPS8 1709 aa17.8■□□□□ 0.44
GFAP-206ENST00000585728 NSD2O96028 1365 aa17.79■□□□□ 0.44
GFAP-206ENST00000585728 INSRP06213 1382 aa17.79■□□□□ 0.44
GFAP-206ENST00000585728 YY1P25490 414 aa17.79■□□□□ 0.44
GFAP-206ENST00000585728 PRIM1P49642 420 aaKnown RBP17.79■□□□□ 0.44
GFAP-206ENST00000585728 FLT4P35916 1363 aa17.79■□□□□ 0.44
GFAP-206ENST00000585728 AKT1S1Q96B36 256 aa17.78■□□□□ 0.44
GFAP-206ENST00000585728 SYTL4Q96C24 671 aaPredicted RBP17.78■□□□□ 0.44
GFAP-206ENST00000585728 HSP90AB2PQ58FF8 381 aa17.77■□□□□ 0.44
GFAP-206ENST00000585728 USHBP1Q8N6Y0 703 aa17.77■□□□□ 0.44
GFAP-206ENST00000585728 SYT17Q9BSW7 474 aa17.77■□□□□ 0.44
GFAP-206ENST00000585728 CARD14Q9BXL6 1004 aa17.77■□□□□ 0.44
GFAP-206ENST00000585728 NSD3Q9BZ95 1437 aa17.77■□□□□ 0.44
GFAP-206ENST00000585728 ITGB4P16144 1822 aa17.77■□□□□ 0.43
GFAP-206ENST00000585728 CHD4Q14839 1912 aa17.76■□□□□ 0.43
GFAP-206ENST00000585728 PKD1L3Q7Z443 1732 aa17.76■□□□□ 0.43
GFAP-206ENST00000585728 RAPGEF4Q8WZA2 1011 aa17.76■□□□□ 0.43
GFAP-206ENST00000585728 FHDC1Q9C0D6 1143 aaPredicted RBP17.76■□□□□ 0.43
GFAP-206ENST00000585728 TATP17735 454 aaPredicted RBP17.75■□□□□ 0.43
GFAP-206ENST00000585728 SLC16A10Q8TF71 515 aa17.75■□□□□ 0.43
GFAP-206ENST00000585728 TAF1LQ8IZX4 1826 aa17.75■□□□□ 0.43
GFAP-206ENST00000585728 ARXQ96QS3 562 aa17.74■□□□□ 0.43
GFAP-206ENST00000585728 MAP3K5Q99683 1374 aa17.73■□□□□ 0.43
GFAP-206ENST00000585728 C5P01031 1676 aa17.73■□□□□ 0.43
GFAP-206ENST00000585728 PNPLA7Q6ZV29 1317 aa17.72■□□□□ 0.43
GFAP-206ENST00000585728 PCDH11XQ9BZA7 1347 aa17.72■□□□□ 0.43
GFAP-206ENST00000585728 PCDH11YQ9BZA8 1340 aa17.72■□□□□ 0.43
GFAP-206ENST00000585728 TOGARAM1Q9Y4F4 1720 aa17.72■□□□□ 0.43
GFAP-206ENST00000585728 KCNQ4P56696 695 aa17.72■□□□□ 0.43
GFAP-206ENST00000585728 EMILIN1Q9Y6C2 1016 aa17.72■□□□□ 0.43
GFAP-206ENST00000585728 NCAPD2Q15021 1401 aa17.72■□□□□ 0.43
GFAP-206ENST00000585728 TFCP2L1Q9NZI6 479 aa17.71■□□□□ 0.43
GFAP-206ENST00000585728 CCNL1Q9UK58 526 aaPredicted RBP17.71■□□□□ 0.43
GFAP-206ENST00000585728 WASHC2AQ641Q2 1341 aa17.69■□□□□ 0.42
GFAP-206ENST00000585728 CYP27B1O15528 508 aa17.67■□□□□ 0.42
GFAP-206ENST00000585728 POLD1P28340 1107 aa17.67■□□□□ 0.42
GFAP-206ENST00000585728 PPM1GO15355 546 aaPredicted RBP17.66■□□□□ 0.42
GFAP-206ENST00000585728 HMGB2P26583 209 aaKnown RBP17.65■□□□□ 0.42
GFAP-206ENST00000585728 PALLDQ8WX93 1383 aa17.65■□□□□ 0.42
GFAP-206ENST00000585728 MPRIPQ6WCQ1 1025 aa17.64■□□□□ 0.41
GFAP-206ENST00000585728 EYA1Q99502 592 aa17.64■□□□□ 0.41
GFAP-206ENST00000585728 POLKQ9UBT6 870 aa17.64■□□□□ 0.41
GFAP-206ENST00000585728 C4BP0C0L5 1744 aa17.64■□□□□ 0.41
GFAP-206ENST00000585728 UBR3Q6ZT12 1888 aa17.63■□□□□ 0.41
GFAP-206ENST00000585728 EIF4G2P78344 907 aaKnown RBP eCLIP17.63■□□□□ 0.41
GFAP-206ENST00000585728 NKX1-1Q15270 411 aaPredicted RBP17.63■□□□□ 0.41
GFAP-206ENST00000585728 COL23A1Q86Y22 540 aaPredicted RBP17.63■□□□□ 0.41
GFAP-206ENST00000585728 POLR3GLQ9BT43 218 aa17.63■□□□□ 0.41
GFAP-206ENST00000585728 SPG7Q9UQ90 795 aa17.63■□□□□ 0.41
GFAP-206ENST00000585728 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.62■□□□□ 0.41
GFAP-206ENST00000585728 SMARCC1Q92922 1105 aaPredicted RBP17.61■□□□□ 0.41
GFAP-206ENST00000585728 MSH5O43196 834 aa17.6■□□□□ 0.41
GFAP-206ENST00000585728 HSPA5P11021 654 aaKnown RBP17.6■□□□□ 0.41
GFAP-206ENST00000585728 KLHL34Q8N239 644 aa17.6■□□□□ 0.41
GFAP-206ENST00000585728 PLEKHG2Q9H7P9 1386 aa17.59■□□□□ 0.41
GFAP-206ENST00000585728 FLAD1Q8NFF5 587 aa17.59■□□□□ 0.41
GFAP-206ENST00000585728 PIGBQ92521 554 aa17.59■□□□□ 0.41
GFAP-206ENST00000585728 EIF4A2Q14240 407 aaKnown RBP17.58■□□□□ 0.4
GFAP-206ENST00000585728 GPR162Q16538 588 aa17.58■□□□□ 0.4
GFAP-206ENST00000585728 ZNF784Q8NCA9 323 aaPredicted RBP17.58■□□□□ 0.4
GFAP-206ENST00000585728 TNNT2P45379 298 aaPredicted RBP17.57■□□□□ 0.4
GFAP-206ENST00000585728 IFNL2Q8IZJ0 200 aa17.57■□□□□ 0.4
GFAP-206ENST00000585728 PANK3Q9H999 370 aa17.57■□□□□ 0.4
GFAP-206ENST00000585728 PHKG2P15735 406 aa17.56■□□□□ 0.4
GFAP-206ENST00000585728 NLGN2Q8NFZ4 835 aa17.56■□□□□ 0.4
GFAP-206ENST00000585728 IGSF1Q8N6C5 1336 aa17.55■□□□□ 0.4
GFAP-206ENST00000585728 MSL1Q68DK7 614 aa17.55■□□□□ 0.4
GFAP-206ENST00000585728 AK7Q96M32 723 aa17.55■□□□□ 0.4
GFAP-206ENST00000585728 TMOD3Q9NYL9 352 aa17.55■□□□□ 0.4
GFAP-206ENST00000585728 ZNF831Q5JPB2 1677 aa17.55■□□□□ 0.4
GFAP-206ENST00000585728 LOC102724428A0A0B4J2F2 783 aa17.54■□□□□ 0.4
GFAP-206ENST00000585728 SIK1P57059 783 aa17.54■□□□□ 0.4
GFAP-206ENST00000585728 PELP1Q8IZL8 1130 aaKnown RBP17.52■□□□□ 0.4
GFAP-206ENST00000585728 AMIGO3Q86WK7 504 aa17.51■□□□□ 0.39
GFAP-206ENST00000585728 LINC00116Q8NCU8 138 aa17.51■□□□□ 0.39
GFAP-206ENST00000585728 ASAP1Q9ULH1 1129 aa17.51■□□□□ 0.39
GFAP-206ENST00000585728 CD2APQ9Y5K6 639 aa17.51■□□□□ 0.39
GFAP-206ENST00000585728 COL5A3P25940 1745 aaPredicted RBP17.5■□□□□ 0.39
GFAP-206ENST00000585728 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.5■□□□□ 0.39
GFAP-206ENST00000585728 SSFA2P28290 1259 aa17.5■□□□□ 0.39
GFAP-206ENST00000585728 UTRNP46939 3433 aa17.5■□□□□ 0.39
GFAP-206ENST00000585728 ERVV-2B6SEH9 535 aa17.49■□□□□ 0.39
GFAP-206ENST00000585728 PHF14O94880 888 aa17.49■□□□□ 0.39
GFAP-206ENST00000585728 HSP90AB1P08238 724 aaKnown RBP17.49■□□□□ 0.39
GFAP-206ENST00000585728 ATP6V1AP38606 617 aa17.49■□□□□ 0.39
GFAP-206ENST00000585728 ITPK1Q13572 414 aa17.49■□□□□ 0.39
GFAP-206ENST00000585728 MORC1Q86VD1 984 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms