RNA–Protein interactions for RNA: ENST00000585594.5

NEDD4L-212, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-212ENST00000585594 C22orf23Q9BZE7 217 aa2.13□□□□□ -2.07
NEDD4L-212ENST00000585594 LNPKQ9C0E8 428 aa2.13□□□□□ -2.07
NEDD4L-212ENST00000585594 EFCC1Q9HA90 598 aa2.13□□□□□ -2.07
NEDD4L-212ENST00000585594 SPC25Q9HBM1 224 aa2.13□□□□□ -2.07
NEDD4L-212ENST00000585594 BMP2KQ9NSY1 1161 aaPredicted RBP2.13□□□□□ -2.07
NEDD4L-212ENST00000585594 KLF15Q9UIH9 416 aa2.13□□□□□ -2.07
NEDD4L-212ENST00000585594 NOL7Q9UMY1 257 aaKnown RBP2.13□□□□□ -2.07
NEDD4L-212ENST00000585594 WASHC2AQ641Q2 1341 aa2.13□□□□□ -2.07
NEDD4L-212ENST00000585594 PABPN1LA6NDY0 278 aaKnown RBP2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 ERICH4A6NGS2 130 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 CCP110O43303 1012 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 HTATSF1O43719 755 aaKnown RBP2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 HIP1RO75146 1068 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 CCDC175P0C221 793 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 NBPF7P0C2Y1 421 aaPredicted RBP2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 SETSIPP0DME0 302 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 U2AF1L5P0DN76 240 aaPredicted RBP2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 FOSL1P15407 271 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 KCNA2P16389 499 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 PAX7P23759 505 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 ERCC5P28715 1186 aaPredicted RBP2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 USP5P45974 858 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 U2AF1Q01081 240 aaKnown RBP eCLIP2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 FAM160A1Q05DH4 1040 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 POU5F1BQ06416 359 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 IFT88Q13099 833 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 DHX8Q14562 1220 aaKnown RBP2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 KCTD2Q14681 263 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 ENOX2Q16206 610 aaKnown RBP2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 CCDC144BQ3MJ40 725 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 ZC3H12AQ5D1E8 599 aaKnown RBP2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 RNF187Q5TA31 235 aaPredicted RBP2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 MFSD4BQ5TF39 518 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 MSL1Q68DK7 614 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 CCDC70Q6NSX1 233 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 EP400NLQ6ZTU2 488 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 UBE2Q1Q7Z7E8 422 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 CATIPQ7Z7H3 387 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 LCA5Q86VQ0 697 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 ANKRD13BQ86YJ7 626 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 FMNL3Q8IVF7 1028 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 LMNTD2Q8IXW0 634 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 PAF1Q8N7H5 531 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 MNS1Q8NEH6 495 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 PBXIP1Q96AQ6 731 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 IL17RAQ96F46 866 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 CCDC34Q96HJ3 373 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 ZNF512BQ96KM6 892 aaPredicted RBP2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 PCMTD1Q96MG8 357 aaPredicted RBP2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 HS3ST6Q96QI5 342 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 EPAS1Q99814 870 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 TBC1D2Q9BYX2 928 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 TANGO6Q9C0B7 1094 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 NUCKS1Q9H1E3 243 aaKnown RBP2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 RETREG1Q9H6L5 497 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 QTRT2Q9H974 415 aaKnown RBP2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 SMC4Q9NTJ3 1288 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 UTP6Q9NYH9 597 aaKnown RBP2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 ODF2LQ9ULJ1 636 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 AKAP2Q9Y2D5 859 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 DIS3Q9Y2L1 958 aaKnown RBP2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 CHMP3Q9Y3E7 222 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 COL4A3BPQ9Y5P4 624 aa2.12□□□□□ -2.07
NEDD4L-212ENST00000585594 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 DYTNA2CJ06 578 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 KLHL33A6NCF5 533 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 STK25O00506 426 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 KIF3CO14782 793 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 NPHP1O15259 732 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 TBC1D12O60347 775 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 PPFIA3O75145 1194 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 MTA2O94776 668 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 ATG7O95352 703 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 IGHDP01880 384 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 LDHCP07864 332 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 NAT2P11245 290 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 EIF5P55010 431 aaKnown RBP2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 CCT2P78371 535 aaKnown RBP2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 UBE4AQ14139 1066 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 TCEAL1Q15170 157 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 E2F5Q15329 346 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 NFE2L2Q16236 605 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 LRCH2Q5VUJ6 765 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 C16orf87Q6PH81 154 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 ANKRD13DQ6ZTN6 518 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 OTUD6AQ7L8S5 288 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 CADPS2Q86UW7 1296 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 TTC30AQ86WT1 665 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 SKAP1Q86WV1 359 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 DZIP3Q86Y13 1208 aaKnown RBP2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 GPIHBP1Q8IV16 184 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 NLGN1Q8N2Q7 840 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 CHCHD4Q8N4Q1 142 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 SAMD3Q8N6K7 520 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 TMC2Q8TDI7 906 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 PPM1EQ8WY54 764 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 JDP2Q8WYK2 163 aa2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 DHX38Q92620 1227 aaKnown RBP2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 ERCC4Q92889 916 aaPredicted RBP2.11□□□□□ -2.07
NEDD4L-212ENST00000585594 RNF166Q96A37 237 aaPredicted RBP2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms