RNA–Protein interactions for RNA: ENST00000585435.5

TRMT1-204, Transcript of tRNA methyltransferase 1, humanhuman

TSL 3

Gene TRMT1, Length 437 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT1-204ENST00000585435 CFAP53Q96M91 514 aa21.46■■□□□ 1.03
TRMT1-204ENST00000585435 IGSF1Q8N6C5 1336 aa21.46■■□□□ 1.03
TRMT1-204ENST00000585435 BCL9O00512 1426 aa21.46■■□□□ 1.03
TRMT1-204ENST00000585435 NCAPD2Q15021 1401 aa21.46■■□□□ 1.03
TRMT1-204ENST00000585435 DIAPH1O60610 1272 aaKnown RBP21.45■■□□□ 1.02
TRMT1-204ENST00000585435 TNS1Q9HBL0 1735 aaKnown RBP21.44■■□□□ 1.02
TRMT1-204ENST00000585435 ZNF316A6NFI3 1004 aaPredicted RBP21.44■■□□□ 1.02
TRMT1-204ENST00000585435 APBA3O96018 575 aa21.44■■□□□ 1.02
TRMT1-204ENST00000585435 PPP2R1AP30153 589 aa21.44■■□□□ 1.02
TRMT1-204ENST00000585435 IL13P35225 146 aa21.44■■□□□ 1.02
TRMT1-204ENST00000585435 SPG7Q9UQ90 795 aa21.44■■□□□ 1.02
TRMT1-204ENST00000585435 PCDH11XQ9BZA7 1347 aa21.43■■□□□ 1.02
TRMT1-204ENST00000585435 PCDH11YQ9BZA8 1340 aa21.43■■□□□ 1.02
TRMT1-204ENST00000585435 BCL11BQ9C0K0 894 aaPredicted RBP21.42■■□□□ 1.02
TRMT1-204ENST00000585435 SHANK3Q9BYB0 1731 aa21.41■■□□□ 1.02
TRMT1-204ENST00000585435 SULT6B1Q6IMI4 303 aa21.41■■□□□ 1.02
TRMT1-204ENST00000585435 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.41■■□□□ 1.02
TRMT1-204ENST00000585435 PARD3Q8TEW0 1356 aa21.4■■□□□ 1.02
TRMT1-204ENST00000585435 ACSBG1Q96GR2 724 aa21.4■■□□□ 1.02
TRMT1-204ENST00000585435 PKD1L3Q7Z443 1732 aa21.4■■□□□ 1.02
TRMT1-204ENST00000585435 EN1Q05925 392 aaPredicted RBP21.39■■□□□ 1.01
TRMT1-204ENST00000585435 RALBP1Q15311 655 aa21.39■■□□□ 1.01
TRMT1-204ENST00000585435 PLEKHG2Q9H7P9 1386 aa21.38■■□□□ 1.01
TRMT1-204ENST00000585435 YY1P25490 414 aa21.38■■□□□ 1.01
TRMT1-204ENST00000585435 U2SURPO15042 1029 aaKnown RBP21.37■■□□□ 1.01
TRMT1-204ENST00000585435 PLEKHO1Q53GL0 409 aaPredicted RBP21.37■■□□□ 1.01
TRMT1-204ENST00000585435 AEBP1Q8IUX7 1158 aa21.37■■□□□ 1.01
TRMT1-204ENST00000585435 NUDCQ9Y266 331 aa21.37■■□□□ 1.01
TRMT1-204ENST00000585435 NHSQ6T4R5 1651 aa21.37■■□□□ 1.01
TRMT1-204ENST00000585435 AMOTQ4VCS5 1084 aa21.36■■□□□ 1.01
TRMT1-204ENST00000585435 SYTL4Q96C24 671 aaPredicted RBP21.36■■□□□ 1.01
TRMT1-204ENST00000585435 KDRP35968 1356 aa21.36■■□□□ 1.01
TRMT1-204ENST00000585435 COL3A1P02461 1466 aaPredicted RBP21.35■■□□□ 1.01
TRMT1-204ENST00000585435 KCNQ2O43526 872 aa21.35■■□□□ 1.01
TRMT1-204ENST00000585435 HMOX1P09601 288 aa21.35■■□□□ 1.01
TRMT1-204ENST00000585435 CYP27B1O15528 508 aa21.34■■□□□ 1.01
TRMT1-204ENST00000585435 R3HDM1Q15032 1099 aaKnown RBP21.34■■□□□ 1.01
TRMT1-204ENST00000585435 PTF1AQ7RTS3 328 aa21.34■■□□□ 1.01
TRMT1-204ENST00000585435 IFNL2Q8IZJ0 200 aa21.34■■□□□ 1.01
TRMT1-204ENST00000585435 DOT1LQ8TEK3 1739 aa21.34■■□□□ 1.01
TRMT1-204ENST00000585435 PRIM1P49642 420 aaKnown RBP21.33■■□□□ 1.01
TRMT1-204ENST00000585435 EZH2Q15910 746 aaKnown RBP21.33■■□□□ 1.01
TRMT1-204ENST00000585435 CAMKK2Q96RR4 588 aa21.33■■□□□ 1.01
TRMT1-204ENST00000585435 PLSCR1O15162 318 aa21.32■■□□□ 1
TRMT1-204ENST00000585435 BTAF1O14981 1849 aa21.32■■□□□ 1
TRMT1-204ENST00000585435 C1orf141Q5JVX7 400 aa21.31■■□□□ 1
TRMT1-204ENST00000585435 ZNF530Q6P9A1 599 aaPredicted RBP21.31■■□□□ 1
TRMT1-204ENST00000585435 RGPD3A6NKT7 1758 aaPredicted RBP21.31■■□□□ 1
TRMT1-204ENST00000585435 RGPD4Q7Z3J3 1758 aa21.31■■□□□ 1
TRMT1-204ENST00000585435 HSP90AB1P08238 724 aaKnown RBP21.3■■□□□ 1
TRMT1-204ENST00000585435 PHKG2P15735 406 aa21.3■■□□□ 1
TRMT1-204ENST00000585435 NKX1-1Q15270 411 aaPredicted RBP21.3■■□□□ 1
TRMT1-204ENST00000585435 U2AF1L5P0DN76 240 aaPredicted RBP21.29■■□□□ 1
TRMT1-204ENST00000585435 U2AF1Q01081 240 aaKnown RBP eCLIP21.29■■□□□ 1
TRMT1-204ENST00000585435 MYBBP1AQ9BQG0 1328 aaKnown RBP21.29■■□□□ 1
TRMT1-204ENST00000585435 MPRIPQ6WCQ1 1025 aa21.26■□□□□ 0.99
TRMT1-204ENST00000585435 ITGB4P16144 1822 aa21.26■□□□□ 0.99
TRMT1-204ENST00000585435 RREB1Q92766 1687 aa21.25■□□□□ 0.99
TRMT1-204ENST00000585435 NBPF14Q5TI25 921 aa21.25■□□□□ 0.99
TRMT1-204ENST00000585435 DCAF5Q96JK2 942 aa21.25■□□□□ 0.99
TRMT1-204ENST00000585435 PRKRIP1Q9H875 184 aaPredicted RBP21.25■□□□□ 0.99
TRMT1-204ENST00000585435 DCAF8L1A6NGE4 600 aa21.24■□□□□ 0.99
TRMT1-204ENST00000585435 TXNRD1Q16881 649 aa21.24■□□□□ 0.99
TRMT1-204ENST00000585435 TMOD3Q9NYL9 352 aa21.23■□□□□ 0.99
TRMT1-204ENST00000585435 TOGARAM1Q9Y4F4 1720 aa21.23■□□□□ 0.99
TRMT1-204ENST00000585435 NUP188Q5SRE5 1749 aa21.22■□□□□ 0.99
TRMT1-204ENST00000585435 FCHSD2O94868 740 aa21.22■□□□□ 0.99
TRMT1-204ENST00000585435 PRKAR2BP31323 418 aa21.22■□□□□ 0.99
TRMT1-204ENST00000585435 AKAP4Q5JQC9 854 aa21.22■□□□□ 0.99
TRMT1-204ENST00000585435 ERVV-2B6SEH9 535 aa21.21■□□□□ 0.99
TRMT1-204ENST00000585435 NEFMP07197 916 aa21.21■□□□□ 0.99
TRMT1-204ENST00000585435 RSPH6AQ9H0K4 717 aa21.21■□□□□ 0.99
TRMT1-204ENST00000585435 MTHFSDQ2M296 383 aaKnown RBP21.2■□□□□ 0.98
TRMT1-204ENST00000585435 PROM2Q8N271 834 aa21.2■□□□□ 0.98
TRMT1-204ENST00000585435 GAS2L2Q8NHY3 880 aa21.2■□□□□ 0.98
TRMT1-204ENST00000585435 CABP4P57796 275 aa21.19■□□□□ 0.98
TRMT1-204ENST00000585435 PIGBQ92521 554 aa21.19■□□□□ 0.98
TRMT1-204ENST00000585435 SMARCC1Q92922 1105 aaPredicted RBP21.19■□□□□ 0.98
TRMT1-204ENST00000585435 PNNQ9H307 717 aaKnown RBP21.19■□□□□ 0.98
TRMT1-204ENST00000585435 ANP32CO43423 234 aa21.18■□□□□ 0.98
TRMT1-204ENST00000585435 SLC27A3Q5K4L6 730 aa21.18■□□□□ 0.98
TRMT1-204ENST00000585435 SCN11AQ9UI33 1791 aa21.17■□□□□ 0.98
TRMT1-204ENST00000585435 VIRMAQ69YN4 1812 aaKnown RBP21.16■□□□□ 0.98
TRMT1-204ENST00000585435 LY75O60449 1722 aa21.16■□□□□ 0.98
TRMT1-204ENST00000585435 KDM6AO15550 1401 aaPredicted RBP21.16■□□□□ 0.98
TRMT1-204ENST00000585435 HMGB2P26583 209 aaKnown RBP21.16■□□□□ 0.98
TRMT1-204ENST00000585435 PALLDQ8WX93 1383 aa21.15■□□□□ 0.98
TRMT1-204ENST00000585435 GNAT3A8MTJ3 354 aa21.15■□□□□ 0.98
TRMT1-204ENST00000585435 PHACTR3Q96KR7 559 aa21.15■□□□□ 0.98
TRMT1-204ENST00000585435 CCNL1Q9UK58 526 aaPredicted RBP21.15■□□□□ 0.98
TRMT1-204ENST00000585435 WDR43Q15061 677 aaKnown RBP eCLIP21.14■□□□□ 0.97
TRMT1-204ENST00000585435 STK32BQ9NY57 414 aa21.14■□□□□ 0.97
TRMT1-204ENST00000585435 PPP1R1BQ9UD71 204 aaPredicted RBP21.14■□□□□ 0.97
TRMT1-204ENST00000585435 MAP3K5Q99683 1374 aa21.13■□□□□ 0.97
TRMT1-204ENST00000585435 RNMTO43148 476 aaKnown RBP21.13■□□□□ 0.97
TRMT1-204ENST00000585435 NFATC2IPQ8NCF5 419 aa21.12■□□□□ 0.97
TRMT1-204ENST00000585435 LGR6Q9HBX8 967 aa21.12■□□□□ 0.97
TRMT1-204ENST00000585435 MAPK8IP3Q9UPT6 1336 aa21.11■□□□□ 0.97
TRMT1-204ENST00000585435 LRRC4BQ9NT99 713 aa21.11■□□□□ 0.97
TRMT1-204ENST00000585435 ASAP1Q9ULH1 1129 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms