RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 EXOC5O00471 708 aa31.53■■■□□ 2.64
LSM7-202ENST00000585395 CHD4Q14839 1912 aa31.52■■■□□ 2.64
LSM7-202ENST00000585395 SLC15A2Q16348 729 aa31.52■■■□□ 2.64
LSM7-202ENST00000585395 TXNRD1Q16881 649 aa31.52■■■□□ 2.64
LSM7-202ENST00000585395 IL2RBP14784 551 aa31.51■■■□□ 2.63
LSM7-202ENST00000585395 MTFR1LQ9H019 292 aa31.51■■■□□ 2.63
LSM7-202ENST00000585395 SENP3-EIF4A1A0A087X0R7 540 aa31.49■■■□□ 2.63
LSM7-202ENST00000585395 PPM1GO15355 546 aaPredicted RBP31.48■■■□□ 2.63
LSM7-202ENST00000585395 ANKRD26Q9UPS8 1709 aa31.48■■■□□ 2.63
LSM7-202ENST00000585395 FLT4P35916 1363 aa31.47■■■□□ 2.63
LSM7-202ENST00000585395 C1QTNF8P60827 252 aa31.47■■■□□ 2.63
LSM7-202ENST00000585395 SGIP1Q9BQI5 828 aa31.46■■■□□ 2.63
LSM7-202ENST00000585395 TNS2Q63HR2 1409 aa31.46■■■□□ 2.63
LSM7-202ENST00000585395 RGPD2P0DJD1 1756 aa31.45■■■□□ 2.62
LSM7-202ENST00000585395 KIF24Q5T7B8 1368 aa31.44■■■□□ 2.62
LSM7-202ENST00000585395 TNNT2P45379 298 aaPredicted RBP31.44■■■□□ 2.62
LSM7-202ENST00000585395 MAP2P11137 1827 aaKnown RBP31.43■■■□□ 2.62
LSM7-202ENST00000585395 EMILIN1Q9Y6C2 1016 aa31.43■■■□□ 2.62
LSM7-202ENST00000585395 HSP90AB2PQ58FF8 381 aa31.41■■■□□ 2.62
LSM7-202ENST00000585395 INSRP06213 1382 aa31.41■■■□□ 2.62
LSM7-202ENST00000585395 MAP3K5Q99683 1374 aa31.41■■■□□ 2.62
LSM7-202ENST00000585395 PER1O15534 1290 aaPredicted RBP31.4■■■□□ 2.62
LSM7-202ENST00000585395 ARXQ96QS3 562 aa31.4■■■□□ 2.62
LSM7-202ENST00000585395 MORC1Q86VD1 984 aa31.39■■■□□ 2.62
LSM7-202ENST00000585395 NPC1L1Q9UHC9 1359 aa31.38■■■□□ 2.61
LSM7-202ENST00000585395 ZNF316A6NFI3 1004 aaPredicted RBP31.37■■■□□ 2.61
LSM7-202ENST00000585395 AMER1Q5JTC6 1135 aaPredicted RBP31.37■■■□□ 2.61
LSM7-202ENST00000585395 KAT6BQ8WYB5 2073 aa31.36■■■□□ 2.61
LSM7-202ENST00000585395 USHBP1Q8N6Y0 703 aa31.36■■■□□ 2.61
LSM7-202ENST00000585395 NHSQ6T4R5 1651 aa31.35■■■□□ 2.61
LSM7-202ENST00000585395 NBPF6Q5VWK0 638 aa31.34■■■□□ 2.61
LSM7-202ENST00000585395 RAPGEF4Q8WZA2 1011 aa31.34■■■□□ 2.61
LSM7-202ENST00000585395 NBPF4Q96M43 638 aa31.34■■■□□ 2.61
LSM7-202ENST00000585395 DDX54Q8TDD1 881 aaKnown RBP31.33■■■□□ 2.61
LSM7-202ENST00000585395 PAPPAQ13219 1627 aa31.31■■■□□ 2.6
LSM7-202ENST00000585395 POLKQ9UBT6 870 aa31.31■■■□□ 2.6
LSM7-202ENST00000585395 TATP17735 454 aaPredicted RBP31.3■■■□□ 2.6
LSM7-202ENST00000585395 DDX10Q13206 875 aaKnown RBP31.29■■■□□ 2.6
LSM7-202ENST00000585395 CC2D1BQ5T0F9 858 aaKnown RBP31.29■■■□□ 2.6
LSM7-202ENST00000585395 ACSBG1Q96GR2 724 aa31.29■■■□□ 2.6
LSM7-202ENST00000585395 GPR162Q16538 588 aa31.28■■■□□ 2.6
LSM7-202ENST00000585395 IFFO2Q5TF58 517 aa31.28■■■□□ 2.6
LSM7-202ENST00000585395 ZCRB1Q8TBF4 217 aaKnown RBP31.28■■■□□ 2.6
LSM7-202ENST00000585395 MEGF6O75095 1541 aa31.28■■■□□ 2.6
LSM7-202ENST00000585395 GIGYF1O75420 1035 aaPredicted RBP31.25■■■□□ 2.59
LSM7-202ENST00000585395 CNGB1Q14028 1251 aaPredicted RBP31.22■■■□□ 2.59
LSM7-202ENST00000585395 SLC16A10Q8TF71 515 aa31.22■■■□□ 2.59
LSM7-202ENST00000585395 ZNF827Q17R98 1081 aa31.21■■■□□ 2.59
LSM7-202ENST00000585395 BTAF1O14981 1849 aa31.21■■■□□ 2.59
LSM7-202ENST00000585395 CEP350Q5VT06 3117 aa31.2■■■□□ 2.59
LSM7-202ENST00000585395 SYTL4Q96C24 671 aaPredicted RBP31.19■■■□□ 2.58
LSM7-202ENST00000585395 EIF4A2Q14240 407 aaKnown RBP31.18■■■□□ 2.58
LSM7-202ENST00000585395 SHANK3Q9BYB0 1731 aa31.18■■■□□ 2.58
LSM7-202ENST00000585395 GOLGB1Q14789 3259 aaKnown RBP31.18■■■□□ 2.58
LSM7-202ENST00000585395 POLD1P28340 1107 aa31.17■■■□□ 2.58
LSM7-202ENST00000585395 EYA1Q99502 592 aa31.17■■■□□ 2.58
LSM7-202ENST00000585395 PCDH11XQ9BZA7 1347 aa31.17■■■□□ 2.58
LSM7-202ENST00000585395 PCDH11YQ9BZA8 1340 aa31.17■■■□□ 2.58
LSM7-202ENST00000585395 QSER1Q2KHR3 1735 aa31.16■■■□□ 2.58
LSM7-202ENST00000585395 LRRC4BQ9NT99 713 aa31.16■■■□□ 2.58
LSM7-202ENST00000585395 DOT1LQ8TEK3 1739 aa31.15■■■□□ 2.58
LSM7-202ENST00000585395 SLC27A3Q5K4L6 730 aa31.14■■■□□ 2.58
LSM7-202ENST00000585395 AKT1S1Q96B36 256 aa31.14■■■□□ 2.58
LSM7-202ENST00000585395 COL24A1Q17RW2 1714 aa31.14■■■□□ 2.58
LSM7-202ENST00000585395 KLHL34Q8N239 644 aa31.13■■■□□ 2.57
LSM7-202ENST00000585395 SPG7Q9UQ90 795 aa31.12■■■□□ 2.57
LSM7-202ENST00000585395 PELP1Q8IZL8 1130 aaKnown RBP31.11■■■□□ 2.57
LSM7-202ENST00000585395 NCAPD2Q15021 1401 aa31.09■■■□□ 2.57
LSM7-202ENST00000585395 PRIM1P49642 420 aaKnown RBP31.09■■■□□ 2.57
LSM7-202ENST00000585395 PKD1L3Q7Z443 1732 aa31.09■■■□□ 2.57
LSM7-202ENST00000585395 RALBP1Q15311 655 aa31.08■■■□□ 2.57
LSM7-202ENST00000585395 PNPLA7Q6ZV29 1317 aa31.07■■■□□ 2.56
LSM7-202ENST00000585395 MTHFSP49914 203 aa31.07■■■□□ 2.56
LSM7-202ENST00000585395 IGSF1Q8N6C5 1336 aa31.05■■■□□ 2.56
LSM7-202ENST00000585395 GRIN3BO60391 1043 aa31.05■■■□□ 2.56
LSM7-202ENST00000585395 CFAP53Q96M91 514 aa31.05■■■□□ 2.56
LSM7-202ENST00000585395 TFCP2L1Q9NZI6 479 aa31.04■■■□□ 2.56
LSM7-202ENST00000585395 NLGN2Q8NFZ4 835 aa31.03■■■□□ 2.56
LSM7-202ENST00000585395 CYP27B1O15528 508 aa31.01■■■□□ 2.55
LSM7-202ENST00000585395 PPP2R1AP30153 589 aa31.01■■■□□ 2.55
LSM7-202ENST00000585395 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.01■■■□□ 2.55
LSM7-202ENST00000585395 TUBGCP6Q96RT7 1819 aa30.99■■■□□ 2.55
LSM7-202ENST00000585395 IFNL2Q8IZJ0 200 aa30.98■■■□□ 2.55
LSM7-202ENST00000585395 PLEKHO1Q53GL0 409 aaPredicted RBP30.97■■■□□ 2.55
LSM7-202ENST00000585395 SULT6B1Q6IMI4 303 aa30.97■■■□□ 2.55
LSM7-202ENST00000585395 DIAPH1O60610 1272 aaKnown RBP30.96■■■□□ 2.55
LSM7-202ENST00000585395 YBX3P16989 372 aaKnown RBP eCLIP30.96■■■□□ 2.55
LSM7-202ENST00000585395 MPRIPQ6WCQ1 1025 aa30.96■■■□□ 2.55
LSM7-202ENST00000585395 PLEKHG2Q9H7P9 1386 aa30.95■■■□□ 2.55
LSM7-202ENST00000585395 IL13P35225 146 aa30.95■■■□□ 2.55
LSM7-202ENST00000585395 AEBP1Q8IUX7 1158 aa30.94■■■□□ 2.54
LSM7-202ENST00000585395 LY75O60449 1722 aa30.93■■■□□ 2.54
LSM7-202ENST00000585395 ITGB4P16144 1822 aa30.93■■■□□ 2.54
LSM7-202ENST00000585395 PHKG2P15735 406 aa30.92■■■□□ 2.54
LSM7-202ENST00000585395 KCNQ4P56696 695 aa30.92■■■□□ 2.54
LSM7-202ENST00000585395 AMOTQ4VCS5 1084 aa30.92■■■□□ 2.54
LSM7-202ENST00000585395 TOGARAM1Q9Y4F4 1720 aa30.92■■■□□ 2.54
LSM7-202ENST00000585395 MYBBP1AQ9BQG0 1328 aaKnown RBP30.92■■■□□ 2.54
LSM7-202ENST00000585395 ZNF530Q6P9A1 599 aaPredicted RBP30.91■■■□□ 2.54
LSM7-202ENST00000585395 NUDCQ9Y266 331 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms