RNA–Protein interactions for RNA: ENST00000585352.5

ZNF559-203, Transcript of zinc finger protein 559, humanhuman

TSL 1 (best) BASIC

Gene ZNF559, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF559-203ENST00000585352 PCDHGA4Q9Y5G9 962 aa11.93□□□□□ -0.5
ZNF559-203ENST00000585352 PSME1Q06323 249 aa11.92□□□□□ -0.5
ZNF559-203ENST00000585352 IQSEC2Q5JU85 1478 aa11.91□□□□□ -0.5
ZNF559-203ENST00000585352 LTBP4Q8N2S1 1624 aa11.91□□□□□ -0.5
ZNF559-203ENST00000585352 USP54Q70EL1 1684 aa11.91□□□□□ -0.5
ZNF559-203ENST00000585352 TTC21BQ7Z4L5 1316 aa11.9□□□□□ -0.5
ZNF559-203ENST00000585352 WDR43Q15061 677 aaKnown RBP eCLIP11.9□□□□□ -0.5
ZNF559-203ENST00000585352 GGNBP2Q9H3C7 697 aa11.9□□□□□ -0.5
ZNF559-203ENST00000585352 PIK3C2AO00443 1686 aa11.9□□□□□ -0.5
ZNF559-203ENST00000585352 NUDT7P0C024 238 aa11.89□□□□□ -0.51
ZNF559-203ENST00000585352 PTCD2Q8WV60 388 aaKnown RBP11.89□□□□□ -0.51
ZNF559-203ENST00000585352 OVOS2A0A0J9YW53 1432 aa11.88□□□□□ -0.51
ZNF559-203ENST00000585352 OVOS2Q6IE36 1432 aa11.88□□□□□ -0.51
ZNF559-203ENST00000585352 PPP2R1AP30153 589 aa11.88□□□□□ -0.51
ZNF559-203ENST00000585352 TNNT2P45379 298 aaPredicted RBP11.88□□□□□ -0.51
ZNF559-203ENST00000585352 NME9Q86XW9 330 aa11.88□□□□□ -0.51
ZNF559-203ENST00000585352 ARHGEF10O15013 1369 aa11.88□□□□□ -0.51
ZNF559-203ENST00000585352 TNS3Q68CZ2 1445 aa11.87□□□□□ -0.51
ZNF559-203ENST00000585352 TRPM3Q9HCF6 1732 aaPredicted RBP11.87□□□□□ -0.51
ZNF559-203ENST00000585352 FYB1O15117 783 aa11.87□□□□□ -0.51
ZNF559-203ENST00000585352 PLPP6Q8IY26 295 aa11.87□□□□□ -0.51
ZNF559-203ENST00000585352 SLAIN2Q9P270 581 aa11.87□□□□□ -0.51
ZNF559-203ENST00000585352 CDK12Q9NYV4 1490 aaPredicted RBP11.87□□□□□ -0.51
ZNF559-203ENST00000585352 NHSL1Q5SYE7 1610 aa11.86□□□□□ -0.51
ZNF559-203ENST00000585352 GTPBP6O43824 516 aaPredicted RBP11.86□□□□□ -0.51
ZNF559-203ENST00000585352 DSG2Q14126 1118 aa11.86□□□□□ -0.51
ZNF559-203ENST00000585352 ABTB2Q8N961 1025 aa11.86□□□□□ -0.51
ZNF559-203ENST00000585352 ORAI2Q96SN7 254 aa11.86□□□□□ -0.51
ZNF559-203ENST00000585352 SBNO1A3KN83 1393 aa11.86□□□□□ -0.51
ZNF559-203ENST00000585352 AATKQ6ZMQ8 1374 aa11.86□□□□□ -0.51
ZNF559-203ENST00000585352 USP31Q70CQ4 1352 aa11.86□□□□□ -0.51
ZNF559-203ENST00000585352 SSH2Q76I76 1423 aa11.86□□□□□ -0.51
ZNF559-203ENST00000585352 FOXO3O43524 673 aa11.85□□□□□ -0.51
ZNF559-203ENST00000585352 TOM1O60784 492 aa11.85□□□□□ -0.51
ZNF559-203ENST00000585352 LMOD2Q6P5Q4 547 aa11.85□□□□□ -0.51
ZNF559-203ENST00000585352 YTHDC1Q96MU7 727 aaKnown RBP11.85□□□□□ -0.51
ZNF559-203ENST00000585352 CRISPLD2Q9H0B8 497 aa11.85□□□□□ -0.51
ZNF559-203ENST00000585352 NUDCQ9Y266 331 aa11.85□□□□□ -0.51
ZNF559-203ENST00000585352 SMG6Q86US8 1419 aaKnown RBP11.85□□□□□ -0.51
ZNF559-203ENST00000585352 ROBO1Q9Y6N7 1651 aa11.84□□□□□ -0.51
ZNF559-203ENST00000585352 MED1Q15648 1581 aaPredicted RBP11.84□□□□□ -0.51
ZNF559-203ENST00000585352 CENPBP07199 599 aaPredicted RBP11.84□□□□□ -0.51
ZNF559-203ENST00000585352 KRT28Q7Z3Y7 464 aa11.84□□□□□ -0.51
ZNF559-203ENST00000585352 LHX6Q9UPM6 363 aa11.84□□□□□ -0.51
ZNF559-203ENST00000585352 ALS2Q96Q42 1657 aa11.84□□□□□ -0.51
ZNF559-203ENST00000585352 PXDNQ92626 1479 aa11.83□□□□□ -0.52
ZNF559-203ENST00000585352 RTL1A6NKG5 1358 aa11.83□□□□□ -0.52
ZNF559-203ENST00000585352 AHDC1Q5TGY3 1603 aaPredicted RBP11.83□□□□□ -0.52
ZNF559-203ENST00000585352 BRINP3Q76B58 766 aa11.83□□□□□ -0.52
ZNF559-203ENST00000585352 FAM9BQ8IZU0 186 aa11.83□□□□□ -0.52
ZNF559-203ENST00000585352 KCNH5Q8NCM2 988 aa11.83□□□□□ -0.52
ZNF559-203ENST00000585352 KIF24Q5T7B8 1368 aa11.82□□□□□ -0.52
ZNF559-203ENST00000585352 PPM1GO15355 546 aaPredicted RBP11.82□□□□□ -0.52
ZNF559-203ENST00000585352 PBX2P40425 430 aa11.82□□□□□ -0.52
ZNF559-203ENST00000585352 XPCQ01831 940 aaPredicted RBP11.82□□□□□ -0.52
ZNF559-203ENST00000585352 INSRP06213 1382 aa11.81□□□□□ -0.52
ZNF559-203ENST00000585352 FLT4P35916 1363 aa11.81□□□□□ -0.52
ZNF559-203ENST00000585352 PSDA5PKW4 1024 aaPredicted RBP11.81□□□□□ -0.52
ZNF559-203ENST00000585352 NEFMP07197 916 aa11.81□□□□□ -0.52
ZNF559-203ENST00000585352 HAP1P54257 671 aaPredicted RBP11.81□□□□□ -0.52
ZNF559-203ENST00000585352 MAP2P11137 1827 aaKnown RBP11.81□□□□□ -0.52
ZNF559-203ENST00000585352 SLIT3O75094 1523 aa11.81□□□□□ -0.52
ZNF559-203ENST00000585352 PHRF1Q9P1Y6 1649 aaKnown RBP11.8□□□□□ -0.52
ZNF559-203ENST00000585352 MTHFSP49914 203 aa11.8□□□□□ -0.52
ZNF559-203ENST00000585352 ABCC6O95255 1503 aa11.8□□□□□ -0.52
ZNF559-203ENST00000585352 PHLPP1O60346 1717 aa11.8□□□□□ -0.52
ZNF559-203ENST00000585352 LTN1O94822 1766 aa11.79□□□□□ -0.52
ZNF559-203ENST00000585352 PTGER2P43116 358 aa11.79□□□□□ -0.52
ZNF559-203ENST00000585352 AMPHP49418 695 aa11.79□□□□□ -0.52
ZNF559-203ENST00000585352 PNNQ9H307 717 aaKnown RBP11.79□□□□□ -0.52
ZNF559-203ENST00000585352 MARF1Q9Y4F3 1742 aaKnown RBP11.79□□□□□ -0.52
ZNF559-203ENST00000585352 USP19O94966 1318 aa11.79□□□□□ -0.52
ZNF559-203ENST00000585352 SHPRHQ149N8 1683 aa11.78□□□□□ -0.52
ZNF559-203ENST00000585352 NFAT5O94916 1531 aa11.78□□□□□ -0.52
ZNF559-203ENST00000585352 UBAP1LF5GYI3 381 aa11.78□□□□□ -0.52
ZNF559-203ENST00000585352 TBC1D12O60347 775 aa11.78□□□□□ -0.52
ZNF559-203ENST00000585352 DIAPH1O60610 1272 aaKnown RBP11.78□□□□□ -0.52
ZNF559-203ENST00000585352 HNRNPUQ00839 825 aaKnown RBP eCLIP11.78□□□□□ -0.52
ZNF559-203ENST00000585352 NUTM2GQ5VZR2 741 aa11.78□□□□□ -0.52
ZNF559-203ENST00000585352 SPATA31A3Q5VYP0 1347 aa11.78□□□□□ -0.52
ZNF559-203ENST00000585352 BLMP54132 1417 aaPredicted RBP11.77□□□□□ -0.52
ZNF559-203ENST00000585352 COL3A1P02461 1466 aaPredicted RBP11.77□□□□□ -0.52
ZNF559-203ENST00000585352 SOS2Q07890 1332 aaPredicted RBP11.77□□□□□ -0.53
ZNF559-203ENST00000585352 MAPK8IP3Q9UPT6 1336 aa11.77□□□□□ -0.53
ZNF559-203ENST00000585352 ZBTB7CA1YPR0 619 aa11.76□□□□□ -0.53
ZNF559-203ENST00000585352 U2SURPO15042 1029 aaKnown RBP11.76□□□□□ -0.53
ZNF559-203ENST00000585352 PDE4AP27815 886 aa11.76□□□□□ -0.53
ZNF559-203ENST00000585352 LSM11P83369 360 aaKnown RBP eCLIP11.76□□□□□ -0.53
ZNF559-203ENST00000585352 RRS1Q15050 365 aaKnown RBP11.76□□□□□ -0.53
ZNF559-203ENST00000585352 PNISRQ8TF01 805 aaKnown RBP11.76□□□□□ -0.53
ZNF559-203ENST00000585352 EMILIN1Q9Y6C2 1016 aa11.76□□□□□ -0.53
ZNF559-203ENST00000585352 ABCA3Q99758 1704 aa11.75□□□□□ -0.53
ZNF559-203ENST00000585352 U2AF1L5P0DN76 240 aaPredicted RBP11.75□□□□□ -0.53
ZNF559-203ENST00000585352 PIP4K2BP78356 416 aa11.75□□□□□ -0.53
ZNF559-203ENST00000585352 U2AF1Q01081 240 aaKnown RBP eCLIP11.75□□□□□ -0.53
ZNF559-203ENST00000585352 PPP1R15BQ5SWA1 713 aa11.75□□□□□ -0.53
ZNF559-203ENST00000585352 CERKQ8TCT0 537 aa11.75□□□□□ -0.53
ZNF559-203ENST00000585352 OXER1Q8TDS5 423 aa11.75□□□□□ -0.53
ZNF559-203ENST00000585352 POLKQ9UBT6 870 aa11.75□□□□□ -0.53
ZNF559-203ENST00000585352 MAP3K19Q56UN5 1328 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms