RNA–Protein interactions for RNA: ENST00000585335.1

SCAMP4-209, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 5

Gene SCAMP4, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-209ENST00000585335 PNNQ9H307 717 aaKnown RBP19.44■□□□□ 0.7
SCAMP4-209ENST00000585335 MEGF6O75095 1541 aa19.43■□□□□ 0.7
SCAMP4-209ENST00000585335 NEFMP07197 916 aa19.43■□□□□ 0.7
SCAMP4-209ENST00000585335 HMOX1P09601 288 aa19.43■□□□□ 0.7
SCAMP4-209ENST00000585335 PDE3BQ13370 1112 aa19.43■□□□□ 0.7
SCAMP4-209ENST00000585335 AEBP1Q8IUX7 1158 aa19.43■□□□□ 0.7
SCAMP4-209ENST00000585335 TNS2Q63HR2 1409 aa19.42■□□□□ 0.7
SCAMP4-209ENST00000585335 SPG7Q9UQ90 795 aa19.42■□□□□ 0.7
SCAMP4-209ENST00000585335 LRRC37A3O60309 1634 aa19.41■□□□□ 0.7
SCAMP4-209ENST00000585335 FCHSD2O94868 740 aa19.41■□□□□ 0.7
SCAMP4-209ENST00000585335 ZCRB1Q8TBF4 217 aaKnown RBP19.41■□□□□ 0.7
SCAMP4-209ENST00000585335 AMOTQ4VCS5 1084 aa19.4■□□□□ 0.7
SCAMP4-209ENST00000585335 PLEKHO1Q53GL0 409 aaPredicted RBP19.4■□□□□ 0.7
SCAMP4-209ENST00000585335 KRT27Q7Z3Y8 459 aa19.4■□□□□ 0.7
SCAMP4-209ENST00000585335 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.4■□□□□ 0.7
SCAMP4-209ENST00000585335 CCER2I3L3R5 266 aa19.39■□□□□ 0.69
SCAMP4-209ENST00000585335 PCDH11XQ9BZA7 1347 aa19.39■□□□□ 0.69
SCAMP4-209ENST00000585335 PCDH11YQ9BZA8 1340 aa19.39■□□□□ 0.69
SCAMP4-209ENST00000585335 PRKAR2BP31323 418 aa19.38■□□□□ 0.69
SCAMP4-209ENST00000585335 RSPH6AQ9H0K4 717 aa19.38■□□□□ 0.69
SCAMP4-209ENST00000585335 PKD1L3Q7Z443 1732 aa19.37■□□□□ 0.69
SCAMP4-209ENST00000585335 MAPK8IP3Q9UPT6 1336 aa19.36■□□□□ 0.69
SCAMP4-209ENST00000585335 DDX54Q8TDD1 881 aaKnown RBP19.36■□□□□ 0.69
SCAMP4-209ENST00000585335 BRWD3Q6RI45 1802 aa19.36■□□□□ 0.69
SCAMP4-209ENST00000585335 CCDC184Q52MB2 194 aa19.35■□□□□ 0.69
SCAMP4-209ENST00000585335 MIER1Q8N108 512 aa19.35■□□□□ 0.69
SCAMP4-209ENST00000585335 C1orf141Q5JVX7 400 aa19.34■□□□□ 0.69
SCAMP4-209ENST00000585335 ZNF530Q6P9A1 599 aaPredicted RBP19.34■□□□□ 0.69
SCAMP4-209ENST00000585335 GAS2L2Q8NHY3 880 aa19.34■□□□□ 0.69
SCAMP4-209ENST00000585335 IFNL2Q8IZJ0 200 aa19.33■□□□□ 0.68
SCAMP4-209ENST00000585335 ADAMTS8Q9UP79 889 aa19.33■□□□□ 0.68
SCAMP4-209ENST00000585335 HSP90AB1P08238 724 aaKnown RBP19.32■□□□□ 0.68
SCAMP4-209ENST00000585335 FAM196AQ6ZSG2 479 aa19.32■□□□□ 0.68
SCAMP4-209ENST00000585335 MARCH10Q8NA82 808 aaPredicted RBP19.32■□□□□ 0.68
SCAMP4-209ENST00000585335 PNISRQ8TF01 805 aaKnown RBP19.32■□□□□ 0.68
SCAMP4-209ENST00000585335 SHANK3Q9BYB0 1731 aa19.3■□□□□ 0.68
SCAMP4-209ENST00000585335 PHKG2P15735 406 aa19.29■□□□□ 0.68
SCAMP4-209ENST00000585335 AKAP4Q5JQC9 854 aa19.29■□□□□ 0.68
SCAMP4-209ENST00000585335 RUNDC1Q96C34 613 aa19.29■□□□□ 0.68
SCAMP4-209ENST00000585335 BCL9O00512 1426 aa19.28■□□□□ 0.68
SCAMP4-209ENST00000585335 CYP27B1O15528 508 aa19.28■□□□□ 0.68
SCAMP4-209ENST00000585335 MTHFSDQ2M296 383 aaKnown RBP19.28■□□□□ 0.68
SCAMP4-209ENST00000585335 FAM9BQ8IZU0 186 aa19.28■□□□□ 0.68
SCAMP4-209ENST00000585335 PHACTR3Q96KR7 559 aa19.28■□□□□ 0.68
SCAMP4-209ENST00000585335 PLEKHF1Q96S99 279 aa19.28■□□□□ 0.68
SCAMP4-209ENST00000585335 FAM182BQ5T319 152 aa19.27■□□□□ 0.68
SCAMP4-209ENST00000585335 CCDC146Q8IYE0 955 aa19.27■□□□□ 0.68
SCAMP4-209ENST00000585335 MAP3K5Q99683 1374 aa19.26■□□□□ 0.67
SCAMP4-209ENST00000585335 GNAT3A8MTJ3 354 aa19.25■□□□□ 0.67
SCAMP4-209ENST00000585335 NKX1-1Q15270 411 aaPredicted RBP19.25■□□□□ 0.67
SCAMP4-209ENST00000585335 NFE2L2Q16236 605 aa19.25■□□□□ 0.67
SCAMP4-209ENST00000585335 DCAF5Q96JK2 942 aa19.25■□□□□ 0.67
SCAMP4-209ENST00000585335 RTF1Q92541 710 aaKnown RBP19.24■□□□□ 0.67
SCAMP4-209ENST00000585335 LMOD3Q0VAK6 560 aa19.23■□□□□ 0.67
SCAMP4-209ENST00000585335 HTATSF1O43719 755 aaKnown RBP19.22■□□□□ 0.67
SCAMP4-209ENST00000585335 SF3B2Q13435 895 aaKnown RBP19.22■□□□□ 0.67
SCAMP4-209ENST00000585335 MPRIPQ6WCQ1 1025 aa19.21■□□□□ 0.67
SCAMP4-209ENST00000585335 SYTL4Q96C24 671 aaPredicted RBP19.21■□□□□ 0.67
SCAMP4-209ENST00000585335 ACSBG1Q96GR2 724 aa19.21■□□□□ 0.67
SCAMP4-209ENST00000585335 DOT1LQ8TEK3 1739 aa19.2■□□□□ 0.66
SCAMP4-209ENST00000585335 ERVV-2B6SEH9 535 aa19.2■□□□□ 0.66
SCAMP4-209ENST00000585335 TMPOP42166 694 aaKnown RBP19.2■□□□□ 0.66
SCAMP4-209ENST00000585335 RIPK4P57078 832 aa19.2■□□□□ 0.66
SCAMP4-209ENST00000585335 CCDC125Q86Z20 511 aa19.2■□□□□ 0.66
SCAMP4-209ENST00000585335 TRIM37O94972 964 aa19.19■□□□□ 0.66
SCAMP4-209ENST00000585335 BCL11BQ9C0K0 894 aaPredicted RBP19.19■□□□□ 0.66
SCAMP4-209ENST00000585335 NHSQ6T4R5 1651 aa19.19■□□□□ 0.66
SCAMP4-209ENST00000585335 KDM6AO15550 1401 aaPredicted RBP19.18■□□□□ 0.66
SCAMP4-209ENST00000585335 APAF1O14727 1248 aa19.18■□□□□ 0.66
SCAMP4-209ENST00000585335 RNMTO43148 476 aaKnown RBP19.18■□□□□ 0.66
SCAMP4-209ENST00000585335 PRIM1P49642 420 aaKnown RBP19.18■□□□□ 0.66
SCAMP4-209ENST00000585335 CABP4P57796 275 aa19.18■□□□□ 0.66
SCAMP4-209ENST00000585335 NEUROD2Q15784 382 aa19.18■□□□□ 0.66
SCAMP4-209ENST00000585335 TMOD3Q9NYL9 352 aa19.18■□□□□ 0.66
SCAMP4-209ENST00000585335 SBF2Q86WG5 1849 aa19.18■□□□□ 0.66
SCAMP4-209ENST00000585335 SCN11AQ9UI33 1791 aa19.17■□□□□ 0.66
SCAMP4-209ENST00000585335 KAT6BQ8WYB5 2073 aa19.17■□□□□ 0.66
SCAMP4-209ENST00000585335 TEFQ10587 303 aa19.17■□□□□ 0.66
SCAMP4-209ENST00000585335 RRP7AQ9Y3A4 280 aaKnown RBP19.16■□□□□ 0.66
SCAMP4-209ENST00000585335 TOGARAM1Q9Y4F4 1720 aa19.16■□□□□ 0.66
SCAMP4-209ENST00000585335 KCNQ2O43526 872 aa19.15■□□□□ 0.66
SCAMP4-209ENST00000585335 DLG5Q8TDM6 1919 aa19.15■□□□□ 0.66
SCAMP4-209ENST00000585335 ADAMTS7Q9UKP4 1686 aa19.14■□□□□ 0.66
SCAMP4-209ENST00000585335 NGEFQ8N5V2 710 aa19.14■□□□□ 0.65
SCAMP4-209ENST00000585335 SLC52A2Q9HAB3 445 aa19.14■□□□□ 0.65
SCAMP4-209ENST00000585335 LGR6Q9HBX8 967 aa19.14■□□□□ 0.65
SCAMP4-209ENST00000585335 MRC1P22897 1456 aa19.14■□□□□ 0.65
SCAMP4-209ENST00000585335 APBA3O96018 575 aa19.13■□□□□ 0.65
SCAMP4-209ENST00000585335 BAG6P46379 1132 aa19.13■□□□□ 0.65
SCAMP4-209ENST00000585335 MCM10Q7L590 875 aa19.13■□□□□ 0.65
SCAMP4-209ENST00000585335 IL17REQ8NFR9 667 aa19.13■□□□□ 0.65
SCAMP4-209ENST00000585335 CEMIPQ8WUJ3 1361 aa19.13■□□□□ 0.65
SCAMP4-209ENST00000585335 ITGB4P16144 1822 aa19.12■□□□□ 0.65
SCAMP4-209ENST00000585335 VIRMAQ69YN4 1812 aaKnown RBP19.12■□□□□ 0.65
SCAMP4-209ENST00000585335 CALD1Q05682 793 aaKnown RBP19.12■□□□□ 0.65
SCAMP4-209ENST00000585335 NCBP3Q53F19 620 aaKnown RBP19.12■□□□□ 0.65
SCAMP4-209ENST00000585335 NFATC2IPQ8NCF5 419 aa19.12■□□□□ 0.65
SCAMP4-209ENST00000585335 UPF1Q92900 1129 aaKnown RBP eCLIP19.12■□□□□ 0.65
SCAMP4-209ENST00000585335 TNS1Q9HBL0 1735 aaKnown RBP19.11■□□□□ 0.65
SCAMP4-209ENST00000585335 PIGBQ92521 554 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms