RNA–Protein interactions for RNA: ENST00000585268.1

CRLF3-206, Transcript of cytokine receptor like factor 3, humanhuman

TSL 4

Gene CRLF3, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-206ENST00000585268 PHTF2Q8N3S3 785 aa8.96□□□□□ -0.98
CRLF3-206ENST00000585268 CCDC85AQ96PX6 553 aaPredicted RBP8.96□□□□□ -0.98
CRLF3-206ENST00000585268 ALG2Q9H553 416 aa8.96□□□□□ -0.98
CRLF3-206ENST00000585268 PCDHB11Q9Y5F2 797 aa8.96□□□□□ -0.98
CRLF3-206ENST00000585268 KIF21AQ7Z4S6 1674 aa8.95□□□□□ -0.98
CRLF3-206ENST00000585268 A6NJR5 290 aa8.95□□□□□ -0.98
CRLF3-206ENST00000585268 SNRPBP14678 240 aaKnown RBP8.95□□□□□ -0.98
CRLF3-206ENST00000585268 ERVK-9P63128 1117 aa8.95□□□□□ -0.98
CRLF3-206ENST00000585268 C6orf118Q5T5N4 469 aa8.95□□□□□ -0.98
CRLF3-206ENST00000585268 ADAMTS19Q8TE59 1207 aa8.95□□□□□ -0.98
CRLF3-206ENST00000585268 KIFC2Q96AC6 838 aa8.95□□□□□ -0.98
CRLF3-206ENST00000585268 TSEN34Q9BSV6 310 aaKnown RBP8.95□□□□□ -0.98
CRLF3-206ENST00000585268 ADH1AP07327 375 aa8.94□□□□□ -0.98
CRLF3-206ENST00000585268 SCTRP47872 440 aa8.94□□□□□ -0.98
CRLF3-206ENST00000585268 CHIC2Q9UKJ5 165 aa8.94□□□□□ -0.98
CRLF3-206ENST00000585268 GTF3C3Q9Y5Q9 886 aa8.94□□□□□ -0.98
CRLF3-206ENST00000585268 UPP2O95045 317 aa8.93□□□□□ -0.98
CRLF3-206ENST00000585268 BMP2P12643 396 aa8.93□□□□□ -0.98
CRLF3-206ENST00000585268 SLFNL1Q499Z3 407 aa8.93□□□□□ -0.98
CRLF3-206ENST00000585268 CC2D2BQ6DHV5 1058 aa8.93□□□□□ -0.98
CRLF3-206ENST00000585268 RNF135Q8IUD6 432 aa8.93□□□□□ -0.98
CRLF3-206ENST00000585268 KDF1Q8NAX2 398 aaPredicted RBP8.93□□□□□ -0.98
CRLF3-206ENST00000585268 AGBL1Q96MI9 1066 aa8.93□□□□□ -0.98
CRLF3-206ENST00000585268 CUX2O14529 1486 aa8.93□□□□□ -0.98
CRLF3-206ENST00000585268 CEP164Q9UPV0 1460 aa8.93□□□□□ -0.98
CRLF3-206ENST00000585268 THOC2Q8NI27 1593 aaKnown RBP8.93□□□□□ -0.98
CRLF3-206ENST00000585268 MRC2Q9UBG0 1479 aa8.92□□□□□ -0.98
CRLF3-206ENST00000585268 TSGA10IPQ3SY00 556 aa8.92□□□□□ -0.98
CRLF3-206ENST00000585268 CDCA7Q9BWT1 371 aaPredicted RBP8.92□□□□□ -0.98
CRLF3-206ENST00000585268 PIK3CDO00329 1044 aa8.91□□□□□ -0.98
CRLF3-206ENST00000585268 SPINT1O43278 529 aa8.91□□□□□ -0.98
CRLF3-206ENST00000585268 RELBQ01201 579 aa8.91□□□□□ -0.98
CRLF3-206ENST00000585268 TRIM52Q96A61 297 aa8.91□□□□□ -0.98
CRLF3-206ENST00000585268 OSBPL3Q9H4L5 887 aa8.9□□□□□ -0.98
CRLF3-206ENST00000585268 DOLKQ9UPQ8 538 aa8.9□□□□□ -0.98
CRLF3-206ENST00000585268 SOS2Q07890 1332 aaPredicted RBP8.89□□□□□ -0.99
CRLF3-206ENST00000585268 TRAK2O60296 914 aa8.89□□□□□ -0.99
CRLF3-206ENST00000585268 ATP5J2-PTCD1G3V325 749 aa8.88□□□□□ -0.99
CRLF3-206ENST00000585268 PTGIRP43119 386 aa8.88□□□□□ -0.99
CRLF3-206ENST00000585268 PLPP7Q8NBV4 271 aa8.88□□□□□ -0.99
CRLF3-206ENST00000585268 UCN2Q96RP3 112 aa8.88□□□□□ -0.99
CRLF3-206ENST00000585268 ZNF395Q9H8N7 513 aaPredicted RBP8.88□□□□□ -0.99
CRLF3-206ENST00000585268 URB2Q14146 1524 aaKnown RBP8.88□□□□□ -0.99
CRLF3-206ENST00000585268 WDR62O43379 1518 aa8.87□□□□□ -0.99
CRLF3-206ENST00000585268 SOBPA7XYQ1 873 aa8.87□□□□□ -0.99
CRLF3-206ENST00000585268 HDGFL1Q5TGJ6 251 aa8.87□□□□□ -0.99
CRLF3-206ENST00000585268 CYP2U1Q7Z449 544 aa8.87□□□□□ -0.99
CRLF3-206ENST00000585268 GLMNQ92990 594 aa8.87□□□□□ -0.99
CRLF3-206ENST00000585268 INSM2Q96T92 566 aaPredicted RBP8.87□□□□□ -0.99
CRLF3-206ENST00000585268 DNMT3LQ9UJW3 386 aa8.87□□□□□ -0.99
CRLF3-206ENST00000585268 TTLL8A6PVC2 850 aa8.86□□□□□ -0.99
CRLF3-206ENST00000585268 CTSOP43234 321 aaPredicted RBP8.86□□□□□ -0.99
CRLF3-206ENST00000585268 MAP7D1Q3KQU3 841 aa8.86□□□□□ -0.99
CRLF3-206ENST00000585268 OXLD1Q5BKU9 147 aa8.86□□□□□ -0.99
CRLF3-206ENST00000585268 LCE2AQ5TA79 106 aaPredicted RBP8.86□□□□□ -0.99
CRLF3-206ENST00000585268 TREML4Q6UXN2 200 aa8.86□□□□□ -0.99
CRLF3-206ENST00000585268 NFATC2IPQ8NCF5 419 aa8.86□□□□□ -0.99
CRLF3-206ENST00000585268 MYCP01106 439 aaPredicted RBP8.85□□□□□ -0.99
CRLF3-206ENST00000585268 MAN1A2O60476 641 aa8.84□□□□□ -0.99
CRLF3-206ENST00000585268 SKIP12755 728 aa8.84□□□□□ -0.99
CRLF3-206ENST00000585268 USP4Q13107 963 aa8.84□□□□□ -0.99
CRLF3-206ENST00000585268 FOXD4L5Q5VV16 416 aaPredicted RBP8.84□□□□□ -0.99
CRLF3-206ENST00000585268 PRDM2Q13029 1718 aa8.83□□□□□ -1
CRLF3-206ENST00000585268 RNF217Q8TC41 542 aa8.83□□□□□ -1
CRLF3-206ENST00000585268 ESF1Q9H501 851 aaKnown RBP8.83□□□□□ -1
CRLF3-206ENST00000585268 ARHGEF10LQ9HCE6 1279 aa8.83□□□□□ -1
CRLF3-206ENST00000585268 POLMQ9NP87 494 aaPredicted RBP8.83□□□□□ -1
CRLF3-206ENST00000585268 TOPBP1Q92547 1522 aa8.82□□□□□ -1
CRLF3-206ENST00000585268 A0A1W2PRU2 124 aa8.82□□□□□ -1
CRLF3-206ENST00000585268 USP17L5A8MUK1 530 aa8.82□□□□□ -1
CRLF3-206ENST00000585268 TBC1D9Q6ZT07 1266 aa8.82□□□□□ -1
CRLF3-206ENST00000585268 FIGNL2A6NMB9 653 aa8.81□□□□□ -1
CRLF3-206ENST00000585268 GNRH1P01148 92 aa8.81□□□□□ -1
CRLF3-206ENST00000585268 NFX1Q12986 1120 aaKnown RBP8.81□□□□□ -1
CRLF3-206ENST00000585268 CLN3Q13286 438 aa8.81□□□□□ -1
CRLF3-206ENST00000585268 SIRT1Q96EB6 747 aa8.81□□□□□ -1
CRLF3-206ENST00000585268 ZMYND15Q9H091 742 aa8.81□□□□□ -1
CRLF3-206ENST00000585268 RAB6BQ9NRW1 208 aa8.81□□□□□ -1
CRLF3-206ENST00000585268 MEN1O00255 615 aa8.8□□□□□ -1
CRLF3-206ENST00000585268 NCOA4Q13772 614 aa8.8□□□□□ -1
CRLF3-206ENST00000585268 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.8□□□□□ -1
CRLF3-206ENST00000585268 CALR3Q96L12 384 aaKnown RBP8.8□□□□□ -1
CRLF3-206ENST00000585268 ATP9BO43861 1147 aa8.79□□□□□ -1
CRLF3-206ENST00000585268 WFS1O76024 890 aa8.79□□□□□ -1
CRLF3-206ENST00000585268 STAU1O95793 577 aaKnown RBP8.79□□□□□ -1
CRLF3-206ENST00000585268 IL2RAP01589 272 aa8.79□□□□□ -1
CRLF3-206ENST00000585268 RNF144AP50876 292 aaPredicted RBP8.79□□□□□ -1
CRLF3-206ENST00000585268 EML3Q32P44 896 aa8.79□□□□□ -1
CRLF3-206ENST00000585268 DEPDC4Q8N2C3 294 aa8.79□□□□□ -1
CRLF3-206ENST00000585268 ZNF777Q9ULD5 760 aaPredicted RBP8.79□□□□□ -1
CRLF3-206ENST00000585268 ABCC8Q09428 1581 aa8.78□□□□□ -1
CRLF3-206ENST00000585268 USP17L3A6NCW0 530 aa8.78□□□□□ -1
CRLF3-206ENST00000585268 USP17L4A6NCW7 530 aa8.78□□□□□ -1
CRLF3-206ENST00000585268 TERTO14746 1132 aaKnown RBP8.78□□□□□ -1
CRLF3-206ENST00000585268 LZTS3O60299 673 aaPredicted RBP8.78□□□□□ -1
CRLF3-206ENST00000585268 GPC1P35052 558 aa8.78□□□□□ -1
CRLF3-206ENST00000585268 USP17L2Q6R6M4 530 aa8.78□□□□□ -1
CRLF3-206ENST00000585268 USP17L1Q7RTZ2 530 aa8.78□□□□□ -1
CRLF3-206ENST00000585268 PLEKHM2Q8IWE5 1019 aa8.78□□□□□ -1
CRLF3-206ENST00000585268 ETNK1Q9HBU6 452 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms