RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-208ENST00000584796 NDUFB9Q9Y6M9 179 aa7.1□□□□□ -1.27
VAPA-208ENST00000584796 GPC1P35052 558 aa7.09□□□□□ -1.27
VAPA-208ENST00000584796 CC2D2BQ6DHV5 1058 aa7.09□□□□□ -1.27
VAPA-208ENST00000584796 SV2AQ7L0J3 742 aa7.09□□□□□ -1.27
VAPA-208ENST00000584796 CDC14CA4D256 554 aa7.08□□□□□ -1.28
VAPA-208ENST00000584796 SLURP2P0DP57 97 aa7.08□□□□□ -1.28
VAPA-208ENST00000584796 SNRKQ9NRH2 765 aa7.08□□□□□ -1.28
VAPA-208ENST00000584796 APBB1O00213 710 aa7.07□□□□□ -1.28
VAPA-208ENST00000584796 ZNF330Q9Y3S2 320 aaPredicted RBP7.07□□□□□ -1.28
VAPA-208ENST00000584796 A0A1W2PRU2 124 aa7.06□□□□□ -1.28
VAPA-208ENST00000584796 SCTRP47872 440 aa7.06□□□□□ -1.28
VAPA-208ENST00000584796 GSK3AP49840 483 aa7.06□□□□□ -1.28
VAPA-208ENST00000584796 ZNF385CQ66K41 422 aaPredicted RBP7.06□□□□□ -1.28
VAPA-208ENST00000584796 PRICKLE2Q7Z3G6 844 aa7.06□□□□□ -1.28
VAPA-208ENST00000584796 CUEDC1Q9NWM3 386 aaPredicted RBP7.06□□□□□ -1.28
VAPA-208ENST00000584796 MEN1O00255 615 aa7.05□□□□□ -1.28
VAPA-208ENST00000584796 TRAK2O60296 914 aa7.05□□□□□ -1.28
VAPA-208ENST00000584796 KCNMA1Q12791 1236 aa7.05□□□□□ -1.28
VAPA-208ENST00000584796 CLN3Q13286 438 aa7.05□□□□□ -1.28
VAPA-208ENST00000584796 CYP2U1Q7Z449 544 aa7.05□□□□□ -1.28
VAPA-208ENST00000584796 OSBPL3Q9H4L5 887 aa7.05□□□□□ -1.28
VAPA-208ENST00000584796 PCDHB11Q9Y5F2 797 aa7.05□□□□□ -1.28
VAPA-208ENST00000584796 RHOQP17081 205 aa7.04□□□□□ -1.28
VAPA-208ENST00000584796 GAS6Q14393 721 aa7.04□□□□□ -1.28
VAPA-208ENST00000584796 TPRNQ4KMQ1 711 aa7.04□□□□□ -1.28
VAPA-208ENST00000584796 ADAMTS8Q9UP79 889 aa7.04□□□□□ -1.28
VAPA-208ENST00000584796 TRIM22Q8IYM9 498 aa7.03□□□□□ -1.28
VAPA-208ENST00000584796 WHAMMQ8TF30 809 aa7.03□□□□□ -1.28
VAPA-208ENST00000584796 ZNF837Q96EG3 531 aaPredicted RBP7.03□□□□□ -1.28
VAPA-208ENST00000584796 GMCL1Q96IK5 515 aa7.03□□□□□ -1.28
VAPA-208ENST00000584796 GRIP2Q9C0E4 1043 aa7.03□□□□□ -1.28
VAPA-208ENST00000584796 SPATA31C2B4DYI2 1134 aa7.02□□□□□ -1.29
VAPA-208ENST00000584796 ARHGEF15O94989 841 aa7.02□□□□□ -1.29
VAPA-208ENST00000584796 SRSF11Q05519 484 aaKnown RBP7.02□□□□□ -1.29
VAPA-208ENST00000584796 SVOPQ8N4V2 548 aa7.02□□□□□ -1.29
VAPA-208ENST00000584796 NLRP3Q96P20 1036 aa7.02□□□□□ -1.29
VAPA-208ENST00000584796 ARHGEF10LQ9HCE6 1279 aa7.02□□□□□ -1.29
VAPA-208ENST00000584796 DYRK1BQ9Y463 629 aa7.02□□□□□ -1.29
VAPA-208ENST00000584796 ADAMTS2O95450 1211 aa7.01□□□□□ -1.29
VAPA-208ENST00000584796 POU4F2Q12837 409 aa7.01□□□□□ -1.29
VAPA-208ENST00000584796 WDR44Q5JSH3 913 aa7.01□□□□□ -1.29
VAPA-208ENST00000584796 SLC27A3Q5K4L6 730 aa7.01□□□□□ -1.29
VAPA-208ENST00000584796 CEP126Q9P2H0 1117 aa7.01□□□□□ -1.29
VAPA-208ENST00000584796 TBC1D2BQ9UPU7 963 aa7.01□□□□□ -1.29
VAPA-208ENST00000584796 RNF225M0QZC1 329 aaPredicted RBP7□□□□□ -1.29
VAPA-208ENST00000584796 GNRH1P01148 92 aa7□□□□□ -1.29
VAPA-208ENST00000584796 DBN1Q16643 649 aa7□□□□□ -1.29
VAPA-208ENST00000584796 NBPF10Q6P3W6 841 aaKnown RBP7□□□□□ -1.29
VAPA-208ENST00000584796 NBPF15Q8N660 670 aa7□□□□□ -1.29
VAPA-208ENST00000584796 CCDC85AQ96PX6 553 aaPredicted RBP7□□□□□ -1.29
VAPA-208ENST00000584796 IRF5Q13568 498 aa6.99□□□□□ -1.29
VAPA-208ENST00000584796 ESYT1Q9BSJ8 1104 aa6.99□□□□□ -1.29
VAPA-208ENST00000584796 CDCA7Q9BWT1 371 aaPredicted RBP6.99□□□□□ -1.29
VAPA-208ENST00000584796 HRH3Q9Y5N1 445 aa6.99□□□□□ -1.29
VAPA-208ENST00000584796 IL2RAP01589 272 aa6.98□□□□□ -1.29
VAPA-208ENST00000584796 RASSF7Q02833 373 aa6.98□□□□□ -1.29
VAPA-208ENST00000584796 TAS1R3Q7RTX0 852 aa6.98□□□□□ -1.29
VAPA-208ENST00000584796 PHTF2Q8N3S3 785 aa6.98□□□□□ -1.29
VAPA-208ENST00000584796 ESF1Q9H501 851 aaKnown RBP6.98□□□□□ -1.29
VAPA-208ENST00000584796 RAB6BQ9NRW1 208 aa6.98□□□□□ -1.29
VAPA-208ENST00000584796 MBIPQ9NS73 344 aa6.98□□□□□ -1.29
VAPA-208ENST00000584796 H7C1W4 665 aa6.97□□□□□ -1.29
VAPA-208ENST00000584796 WASLO00401 505 aaPredicted RBP6.97□□□□□ -1.29
VAPA-208ENST00000584796 MYCP01106 439 aaPredicted RBP6.97□□□□□ -1.29
VAPA-208ENST00000584796 LYPD4Q6UWN0 246 aa6.97□□□□□ -1.29
VAPA-208ENST00000584796 RIPOR1Q6ZS17 1223 aa6.97□□□□□ -1.29
VAPA-208ENST00000584796 CNKSR1Q969H4 720 aa6.97□□□□□ -1.29
VAPA-208ENST00000584796 GPR25O00155 361 aa6.96□□□□□ -1.3
VAPA-208ENST00000584796 CELA2BP08218 269 aaPredicted RBP6.96□□□□□ -1.3
VAPA-208ENST00000584796 EIF4G2P78344 907 aaKnown RBP eCLIP6.96□□□□□ -1.3
VAPA-208ENST00000584796 FOXR1Q6PIV2 292 aa6.96□□□□□ -1.3
VAPA-208ENST00000584796 TMEM151AQ8N4L1 468 aa6.96□□□□□ -1.3
VAPA-208ENST00000584796 XAGE2Q96GT9 111 aa6.96□□□□□ -1.3
VAPA-208ENST00000584796 GAS2L1Q99501 681 aaPredicted RBP6.96□□□□□ -1.3
VAPA-208ENST00000584796 PRM3Q9NNZ6 103 aa6.96□□□□□ -1.3
VAPA-208ENST00000584796 TIMMDC1Q9NPL8 285 aa6.96□□□□□ -1.3
VAPA-208ENST00000584796 F11P03951 625 aa6.95□□□□□ -1.3
VAPA-208ENST00000584796 CENPCQ03188 943 aa6.95□□□□□ -1.3
VAPA-208ENST00000584796 GTPBP3Q969Y2 492 aaKnown RBP6.95□□□□□ -1.3
VAPA-208ENST00000584796 FHDC1Q9C0D6 1143 aaPredicted RBP6.95□□□□□ -1.3
VAPA-208ENST00000584796 CHIC2Q9UKJ5 165 aa6.95□□□□□ -1.3
VAPA-208ENST00000584796 GDF11O95390 407 aa6.94□□□□□ -1.3
VAPA-208ENST00000584796 THBS1P07996 1170 aa6.94□□□□□ -1.3
VAPA-208ENST00000584796 MAP3K10Q02779 954 aa6.94□□□□□ -1.3
VAPA-208ENST00000584796 TSGA10IPQ3SY00 556 aa6.94□□□□□ -1.3
VAPA-208ENST00000584796 KCTD17Q8N5Z5 321 aa6.94□□□□□ -1.3
VAPA-208ENST00000584796 DOLKQ9UPQ8 538 aa6.94□□□□□ -1.3
VAPA-208ENST00000584796 IGF1RP08069 1367 aa6.94□□□□□ -1.3
VAPA-208ENST00000584796 USP4Q13107 963 aa6.93□□□□□ -1.3
VAPA-208ENST00000584796 ESCO1Q5FWF5 840 aa6.93□□□□□ -1.3
VAPA-208ENST00000584796 TRERF1Q96PN7 1200 aa6.93□□□□□ -1.3
VAPA-208ENST00000584796 ZSCAN10Q96SZ4 725 aaPredicted RBP6.93□□□□□ -1.3
VAPA-208ENST00000584796 NUCKS1Q9H1E3 243 aaKnown RBP6.93□□□□□ -1.3
VAPA-208ENST00000584796 A0A1B0GTH6 734 aa6.92□□□□□ -1.3
VAPA-208ENST00000584796 MARSP56192 900 aaKnown RBP6.92□□□□□ -1.3
VAPA-208ENST00000584796 VAC14Q08AM6 782 aa6.92□□□□□ -1.3
VAPA-208ENST00000584796 SLFNL1Q499Z3 407 aa6.92□□□□□ -1.3
VAPA-208ENST00000584796 KANK3Q6NY19 840 aa6.92□□□□□ -1.3
VAPA-208ENST00000584796 RNF135Q8IUD6 432 aa6.92□□□□□ -1.3
VAPA-208ENST00000584796 SCARF2Q96GP6 870 aaPredicted RBP6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms