RNA–Protein interactions for RNA: ENST00000584760.1

SREBF1-223, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-223ENST00000584760 KIF24Q5T7B8 1368 aa18.4■□□□□ 0.54
SREBF1-223ENST00000584760 AMPHP49418 695 aa18.39■□□□□ 0.53
SREBF1-223ENST00000584760 NHSQ6T4R5 1651 aa18.38■□□□□ 0.53
SREBF1-223ENST00000584760 SGIP1Q9BQI5 828 aa18.38■□□□□ 0.53
SREBF1-223ENST00000584760 FLT4P35916 1363 aa18.38■□□□□ 0.53
SREBF1-223ENST00000584760 ARXQ96QS3 562 aa18.37■□□□□ 0.53
SREBF1-223ENST00000584760 PANK3Q9H999 370 aa18.37■□□□□ 0.53
SREBF1-223ENST00000584760 KIF7Q2M1P5 1343 aa18.37■□□□□ 0.53
SREBF1-223ENST00000584760 INSRP06213 1382 aa18.36■□□□□ 0.53
SREBF1-223ENST00000584760 LTV1Q96GA3 475 aaPredicted RBP18.36■□□□□ 0.53
SREBF1-223ENST00000584760 SMG6Q86US8 1419 aaKnown RBP18.35■□□□□ 0.53
SREBF1-223ENST00000584760 IL2RBP14784 551 aa18.35■□□□□ 0.53
SREBF1-223ENST00000584760 NSD2O96028 1365 aa18.34■□□□□ 0.53
SREBF1-223ENST00000584760 SENP3-EIF4A1A0A087X0R7 540 aa18.34■□□□□ 0.53
SREBF1-223ENST00000584760 MEGF6O75095 1541 aa18.33■□□□□ 0.53
SREBF1-223ENST00000584760 EMILIN1Q9Y6C2 1016 aa18.33■□□□□ 0.52
SREBF1-223ENST00000584760 GPR162Q16538 588 aa18.32■□□□□ 0.52
SREBF1-223ENST00000584760 ZNF827Q17R98 1081 aa18.32■□□□□ 0.52
SREBF1-223ENST00000584760 HSP90AB2PQ58FF8 381 aa18.32■□□□□ 0.52
SREBF1-223ENST00000584760 C1QTNF8P60827 252 aa18.31■□□□□ 0.52
SREBF1-223ENST00000584760 KLHL34Q8N239 644 aa18.31■□□□□ 0.52
SREBF1-223ENST00000584760 LRRC4BQ9NT99 713 aa18.31■□□□□ 0.52
SREBF1-223ENST00000584760 DOT1LQ8TEK3 1739 aa18.31■□□□□ 0.52
SREBF1-223ENST00000584760 NCAPD2Q15021 1401 aa18.31■□□□□ 0.52
SREBF1-223ENST00000584760 BTAF1O14981 1849 aa18.3■□□□□ 0.52
SREBF1-223ENST00000584760 PKD1L3Q7Z443 1732 aa18.3■□□□□ 0.52
SREBF1-223ENST00000584760 NBPF6Q5VWK0 638 aa18.29■□□□□ 0.52
SREBF1-223ENST00000584760 NBPF4Q96M43 638 aa18.29■□□□□ 0.52
SREBF1-223ENST00000584760 WASHC2AQ641Q2 1341 aa18.27■□□□□ 0.52
SREBF1-223ENST00000584760 PELP1Q8IZL8 1130 aaKnown RBP18.27■□□□□ 0.52
SREBF1-223ENST00000584760 DDX54Q8TDD1 881 aaKnown RBP18.27■□□□□ 0.52
SREBF1-223ENST00000584760 POLKQ9UBT6 870 aa18.27■□□□□ 0.52
SREBF1-223ENST00000584760 KAT6BQ8WYB5 2073 aa18.27■□□□□ 0.51
SREBF1-223ENST00000584760 MAP3K5Q99683 1374 aa18.27■□□□□ 0.51
SREBF1-223ENST00000584760 USHBP1Q8N6Y0 703 aa18.26■□□□□ 0.51
SREBF1-223ENST00000584760 AKT1S1Q96B36 256 aa18.26■□□□□ 0.51
SREBF1-223ENST00000584760 PAPPAQ13219 1627 aa18.25■□□□□ 0.51
SREBF1-223ENST00000584760 PPM1GO15355 546 aaPredicted RBP18.25■□□□□ 0.51
SREBF1-223ENST00000584760 POLD1P28340 1107 aa18.25■□□□□ 0.51
SREBF1-223ENST00000584760 TNNT2P45379 298 aaPredicted RBP18.25■□□□□ 0.51
SREBF1-223ENST00000584760 AMER1Q5JTC6 1135 aaPredicted RBP18.25■□□□□ 0.51
SREBF1-223ENST00000584760 KCNQ4P56696 695 aa18.24■□□□□ 0.51
SREBF1-223ENST00000584760 SLC16A10Q8TF71 515 aa18.24■□□□□ 0.51
SREBF1-223ENST00000584760 KNSTRNQ9Y448 316 aa18.24■□□□□ 0.51
SREBF1-223ENST00000584760 SLC27A3Q5K4L6 730 aa18.23■□□□□ 0.51
SREBF1-223ENST00000584760 SYTL4Q96C24 671 aaPredicted RBP18.23■□□□□ 0.51
SREBF1-223ENST00000584760 TFCP2L1Q9NZI6 479 aa18.23■□□□□ 0.51
SREBF1-223ENST00000584760 TOGARAM1Q9Y4F4 1720 aa18.22■□□□□ 0.51
SREBF1-223ENST00000584760 PNPLA7Q6ZV29 1317 aa18.22■□□□□ 0.51
SREBF1-223ENST00000584760 UTRNP46939 3433 aa18.21■□□□□ 0.51
SREBF1-223ENST00000584760 PER1O15534 1290 aaPredicted RBP18.21■□□□□ 0.51
SREBF1-223ENST00000584760 PRIM1P49642 420 aaKnown RBP18.21■□□□□ 0.51
SREBF1-223ENST00000584760 ZCRB1Q8TBF4 217 aaKnown RBP18.21■□□□□ 0.51
SREBF1-223ENST00000584760 RAPGEF4Q8WZA2 1011 aa18.21■□□□□ 0.51
SREBF1-223ENST00000584760 CHD4Q14839 1912 aa18.21■□□□□ 0.51
SREBF1-223ENST00000584760 GIGYF1O75420 1035 aaPredicted RBP18.2■□□□□ 0.5
SREBF1-223ENST00000584760 MORC1Q86VD1 984 aa18.2■□□□□ 0.5
SREBF1-223ENST00000584760 NLGN2Q8NFZ4 835 aa18.2■□□□□ 0.5
SREBF1-223ENST00000584760 LY75O60449 1722 aa18.2■□□□□ 0.5
SREBF1-223ENST00000584760 TATP17735 454 aaPredicted RBP18.19■□□□□ 0.5
SREBF1-223ENST00000584760 EIF4A2Q14240 407 aaKnown RBP18.19■□□□□ 0.5
SREBF1-223ENST00000584760 ITGB4P16144 1822 aa18.19■□□□□ 0.5
SREBF1-223ENST00000584760 EYA1Q99502 592 aa18.18■□□□□ 0.5
SREBF1-223ENST00000584760 NPC1L1Q9UHC9 1359 aa18.17■□□□□ 0.5
SREBF1-223ENST00000584760 MSH5O43196 834 aa18.17■□□□□ 0.5
SREBF1-223ENST00000584760 IGSF1Q8N6C5 1336 aa18.16■□□□□ 0.5
SREBF1-223ENST00000584760 PCDH11XQ9BZA7 1347 aa18.16■□□□□ 0.5
SREBF1-223ENST00000584760 PCDH11YQ9BZA8 1340 aa18.16■□□□□ 0.5
SREBF1-223ENST00000584760 PLEKHG2Q9H7P9 1386 aa18.16■□□□□ 0.5
SREBF1-223ENST00000584760 CCNL1Q9UK58 526 aaPredicted RBP18.14■□□□□ 0.49
SREBF1-223ENST00000584760 CYP27B1O15528 508 aa18.13■□□□□ 0.49
SREBF1-223ENST00000584760 YBX3P16989 372 aaKnown RBP eCLIP18.13■□□□□ 0.49
SREBF1-223ENST00000584760 GRIN3BO60391 1043 aa18.12■□□□□ 0.49
SREBF1-223ENST00000584760 CC2D1BQ5T0F9 858 aaKnown RBP18.12■□□□□ 0.49
SREBF1-223ENST00000584760 COL23A1Q86Y22 540 aaPredicted RBP18.12■□□□□ 0.49
SREBF1-223ENST00000584760 QSER1Q2KHR3 1735 aa18.12■□□□□ 0.49
SREBF1-223ENST00000584760 MSL1Q68DK7 614 aa18.11■□□□□ 0.49
SREBF1-223ENST00000584760 TUBGCP6Q96RT7 1819 aa18.1■□□□□ 0.49
SREBF1-223ENST00000584760 COL3A1P02461 1466 aaPredicted RBP18.1■□□□□ 0.49
SREBF1-223ENST00000584760 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.1■□□□□ 0.49
SREBF1-223ENST00000584760 KDRP35968 1356 aa18.09■□□□□ 0.49
SREBF1-223ENST00000584760 SPG7Q9UQ90 795 aa18.09■□□□□ 0.49
SREBF1-223ENST00000584760 TAF1LQ8IZX4 1826 aa18.08■□□□□ 0.48
SREBF1-223ENST00000584760 IL13P35225 146 aa18.08■□□□□ 0.48
SREBF1-223ENST00000584760 MTHFSP49914 203 aa18.08■□□□□ 0.48
SREBF1-223ENST00000584760 IFFO2Q5TF58 517 aa18.08■□□□□ 0.48
SREBF1-223ENST00000584760 COL24A1Q17RW2 1714 aa18.07■□□□□ 0.48
SREBF1-223ENST00000584760 C5P01031 1676 aa18.07■□□□□ 0.48
SREBF1-223ENST00000584760 NKX1-1Q15270 411 aaPredicted RBP18.07■□□□□ 0.48
SREBF1-223ENST00000584760 VIRMAQ69YN4 1812 aaKnown RBP18.07■□□□□ 0.48
SREBF1-223ENST00000584760 AEBP1Q8IUX7 1158 aa18.06■□□□□ 0.48
SREBF1-223ENST00000584760 PHKG2P15735 406 aa18.04■□□□□ 0.48
SREBF1-223ENST00000584760 ATP10DQ9P241 1426 aa18.04■□□□□ 0.48
SREBF1-223ENST00000584760 SCN11AQ9UI33 1791 aa18.04■□□□□ 0.48
SREBF1-223ENST00000584760 CD2APQ9Y5K6 639 aa18.03■□□□□ 0.48
SREBF1-223ENST00000584760 CNGB1Q14028 1251 aaPredicted RBP18.02■□□□□ 0.48
SREBF1-223ENST00000584760 SULT6B1Q6IMI4 303 aa18.02■□□□□ 0.48
SREBF1-223ENST00000584760 IFNL2Q8IZJ0 200 aa18.02■□□□□ 0.48
SREBF1-223ENST00000584760 GPBP1L1Q9HC44 474 aaPredicted RBP18.02■□□□□ 0.48
SREBF1-223ENST00000584760 KDM6AO15550 1401 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms