RNA–Protein interactions for RNA: ENST00000584716.1

CDK5R1-202, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CDK5R1, Length 962 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-202ENST00000584716 WNK3Q9BYP7 1800 aa16.41■□□□□ 0.22
CDK5R1-202ENST00000584716 POTEAQ6S8J7 498 aa16.41■□□□□ 0.22
CDK5R1-202ENST00000584716 RUNDC1Q96C34 613 aa16.41■□□□□ 0.22
CDK5R1-202ENST00000584716 PLEKHF1Q96S99 279 aa16.41■□□□□ 0.22
CDK5R1-202ENST00000584716 NCAPD2Q15021 1401 aa16.41■□□□□ 0.22
CDK5R1-202ENST00000584716 MAPK8IP3Q9UPT6 1336 aa16.41■□□□□ 0.22
CDK5R1-202ENST00000584716 PARP4Q9UKK3 1724 aaKnown RBP16.4■□□□□ 0.22
CDK5R1-202ENST00000584716 RXRBP28702 533 aa16.4■□□□□ 0.22
CDK5R1-202ENST00000584716 BARGINQ6ZT62 677 aa16.4■□□□□ 0.22
CDK5R1-202ENST00000584716 RBM6P78332 1123 aaKnown RBP16.39■□□□□ 0.21
CDK5R1-202ENST00000584716 NEUROD2Q15784 382 aa16.39■□□□□ 0.21
CDK5R1-202ENST00000584716 PLEKHO1Q53GL0 409 aaPredicted RBP16.39■□□□□ 0.21
CDK5R1-202ENST00000584716 EXOC5O00471 708 aa16.38■□□□□ 0.21
CDK5R1-202ENST00000584716 APAF1O14727 1248 aa16.38■□□□□ 0.21
CDK5R1-202ENST00000584716 MTHFSDQ2M296 383 aaKnown RBP16.38■□□□□ 0.21
CDK5R1-202ENST00000584716 ZCRB1Q8TBF4 217 aaKnown RBP16.38■□□□□ 0.21
CDK5R1-202ENST00000584716 DDX54Q8TDD1 881 aaKnown RBP16.38■□□□□ 0.21
CDK5R1-202ENST00000584716 SPG7Q9UQ90 795 aa16.38■□□□□ 0.21
CDK5R1-202ENST00000584716 RRP7AQ9Y3A4 280 aaKnown RBP16.38■□□□□ 0.21
CDK5R1-202ENST00000584716 DDB1Q16531 1140 aa16.37■□□□□ 0.21
CDK5R1-202ENST00000584716 CDCA7Q9BWT1 371 aaPredicted RBP16.37■□□□□ 0.21
CDK5R1-202ENST00000584716 SALL2Q9Y467 1007 aaPredicted RBP16.37■□□□□ 0.21
CDK5R1-202ENST00000584716 OVOS2A0A0G2JMS6 1433 aa16.36■□□□□ 0.21
CDK5R1-202ENST00000584716 DISP2A7MBM2 1401 aa16.36■□□□□ 0.21
CDK5R1-202ENST00000584716 AMOTQ4VCS5 1084 aa16.36■□□□□ 0.21
CDK5R1-202ENST00000584716 ZNF530Q6P9A1 599 aaPredicted RBP16.36■□□□□ 0.21
CDK5R1-202ENST00000584716 SEPT12Q8IYM1 358 aa16.36■□□□□ 0.21
CDK5R1-202ENST00000584716 ONECUT3O60422 494 aaPredicted RBP16.34■□□□□ 0.21
CDK5R1-202ENST00000584716 RIPK4P57078 832 aa16.34■□□□□ 0.21
CDK5R1-202ENST00000584716 YTHDC1Q96MU7 727 aaKnown RBP16.34■□□□□ 0.21
CDK5R1-202ENST00000584716 LRRC37A3O60309 1634 aa16.34■□□□□ 0.21
CDK5R1-202ENST00000584716 PKD1L3Q7Z443 1732 aa16.33■□□□□ 0.21
CDK5R1-202ENST00000584716 DLG5Q8TDM6 1919 aa16.33■□□□□ 0.21
CDK5R1-202ENST00000584716 TMPOP42166 694 aaKnown RBP16.33■□□□□ 0.2
CDK5R1-202ENST00000584716 PDE3BQ13370 1112 aa16.33■□□□□ 0.2
CDK5R1-202ENST00000584716 NFE2L2Q16236 605 aa16.33■□□□□ 0.2
CDK5R1-202ENST00000584716 C1orf141Q5JVX7 400 aa16.33■□□□□ 0.2
CDK5R1-202ENST00000584716 GAS2L2Q8NHY3 880 aa16.33■□□□□ 0.2
CDK5R1-202ENST00000584716 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.33■□□□□ 0.2
CDK5R1-202ENST00000584716 THSD7AQ9UPZ6 1657 aa16.33■□□□□ 0.2
CDK5R1-202ENST00000584716 SHANK3Q9BYB0 1731 aa16.33■□□□□ 0.2
CDK5R1-202ENST00000584716 CYP27B1O15528 508 aa16.32■□□□□ 0.2
CDK5R1-202ENST00000584716 BRWD3Q6RI45 1802 aa16.32■□□□□ 0.2
CDK5R1-202ENST00000584716 IFNL2Q8IZJ0 200 aa16.32■□□□□ 0.2
CDK5R1-202ENST00000584716 PCDH11XQ9BZA7 1347 aa16.31■□□□□ 0.2
CDK5R1-202ENST00000584716 PCDH11YQ9BZA8 1340 aa16.31■□□□□ 0.2
CDK5R1-202ENST00000584716 PHKG2P15735 406 aa16.31■□□□□ 0.2
CDK5R1-202ENST00000584716 GNAT3A8MTJ3 354 aa16.3■□□□□ 0.2
CDK5R1-202ENST00000584716 HNRNPUQ00839 825 aaKnown RBP eCLIP16.3■□□□□ 0.2
CDK5R1-202ENST00000584716 DCTN1Q14203 1278 aa16.3■□□□□ 0.2
CDK5R1-202ENST00000584716 AKAP4Q5JQC9 854 aa16.3■□□□□ 0.2
CDK5R1-202ENST00000584716 FAM182BQ5T319 152 aa16.3■□□□□ 0.2
CDK5R1-202ENST00000584716 MPRIPQ6WCQ1 1025 aa16.3■□□□□ 0.2
CDK5R1-202ENST00000584716 MARCH10Q8NA82 808 aaPredicted RBP16.3■□□□□ 0.2
CDK5R1-202ENST00000584716 TNS2Q63HR2 1409 aa16.29■□□□□ 0.2
CDK5R1-202ENST00000584716 RTF1Q92541 710 aaKnown RBP16.29■□□□□ 0.2
CDK5R1-202ENST00000584716 LGR6Q9HBX8 967 aa16.29■□□□□ 0.2
CDK5R1-202ENST00000584716 VIRMAQ69YN4 1812 aaKnown RBP16.29■□□□□ 0.2
CDK5R1-202ENST00000584716 MCM10Q7L590 875 aa16.28■□□□□ 0.2
CDK5R1-202ENST00000584716 RGS12O14924 1447 aa16.28■□□□□ 0.2
CDK5R1-202ENST00000584716 MAP3K5Q99683 1374 aa16.27■□□□□ 0.2
CDK5R1-202ENST00000584716 PLEKHG2Q9H7P9 1386 aa16.27■□□□□ 0.2
CDK5R1-202ENST00000584716 KRT27Q7Z3Y8 459 aa16.27■□□□□ 0.2
CDK5R1-202ENST00000584716 THUMPD2Q9BTF0 503 aaKnown RBP16.27■□□□□ 0.2
CDK5R1-202ENST00000584716 TRIM35Q9UPQ4 493 aa16.27■□□□□ 0.2
CDK5R1-202ENST00000584716 KAT6BQ8WYB5 2073 aa16.26■□□□□ 0.19
CDK5R1-202ENST00000584716 RNMTO43148 476 aaKnown RBP16.25■□□□□ 0.19
CDK5R1-202ENST00000584716 HSP90AB1P08238 724 aaKnown RBP16.25■□□□□ 0.19
CDK5R1-202ENST00000584716 LMOD3Q0VAK6 560 aa16.25■□□□□ 0.19
CDK5R1-202ENST00000584716 IL17REQ8NFR9 667 aa16.25■□□□□ 0.19
CDK5R1-202ENST00000584716 ACSBG1Q96GR2 724 aa16.25■□□□□ 0.19
CDK5R1-202ENST00000584716 HTATSF1O43719 755 aaKnown RBP16.24■□□□□ 0.19
CDK5R1-202ENST00000584716 NKX1-1Q15270 411 aaPredicted RBP16.24■□□□□ 0.19
CDK5R1-202ENST00000584716 DCAF5Q96JK2 942 aa16.24■□□□□ 0.19
CDK5R1-202ENST00000584716 SCN11AQ9UI33 1791 aa16.23■□□□□ 0.19
CDK5R1-202ENST00000584716 WWC1Q8IX03 1113 aa16.23■□□□□ 0.19
CDK5R1-202ENST00000584716 SYTL4Q96C24 671 aaPredicted RBP16.23■□□□□ 0.19
CDK5R1-202ENST00000584716 KDM6AO15550 1401 aaPredicted RBP16.22■□□□□ 0.19
CDK5R1-202ENST00000584716 CABP4P57796 275 aa16.22■□□□□ 0.19
CDK5R1-202ENST00000584716 LAS1LQ9Y4W2 734 aaKnown RBP16.22■□□□□ 0.19
CDK5R1-202ENST00000584716 PRIM1P49642 420 aaKnown RBP16.21■□□□□ 0.19
CDK5R1-202ENST00000584716 TEFQ10587 303 aa16.21■□□□□ 0.19
CDK5R1-202ENST00000584716 CCDC27Q2M243 656 aa16.21■□□□□ 0.19
CDK5R1-202ENST00000584716 NFATC2IPQ8NCF5 419 aa16.21■□□□□ 0.19
CDK5R1-202ENST00000584716 DOT1LQ8TEK3 1739 aa16.21■□□□□ 0.19
CDK5R1-202ENST00000584716 TOGARAM1Q9Y4F4 1720 aa16.2■□□□□ 0.18
CDK5R1-202ENST00000584716 ITGB4P16144 1822 aa16.19■□□□□ 0.18
CDK5R1-202ENST00000584716 ERVV-2B6SEH9 535 aa16.19■□□□□ 0.18
CDK5R1-202ENST00000584716 KCNQ2O43526 872 aa16.19■□□□□ 0.18
CDK5R1-202ENST00000584716 FAM196AQ6ZSG2 479 aa16.19■□□□□ 0.18
CDK5R1-202ENST00000584716 NGEFQ8N5V2 710 aa16.19■□□□□ 0.18
CDK5R1-202ENST00000584716 SLC52A2Q9HAB3 445 aa16.19■□□□□ 0.18
CDK5R1-202ENST00000584716 MIS18AQ9NYP9 233 aa16.19■□□□□ 0.18
CDK5R1-202ENST00000584716 NCBP3Q53F19 620 aaKnown RBP16.18■□□□□ 0.18
CDK5R1-202ENST00000584716 TMOD3Q9NYL9 352 aa16.18■□□□□ 0.18
CDK5R1-202ENST00000584716 ADAMTS7Q9UKP4 1686 aa16.18■□□□□ 0.18
CDK5R1-202ENST00000584716 SBF2Q86WG5 1849 aa16.17■□□□□ 0.18
CDK5R1-202ENST00000584716 CEMIPQ8WUJ3 1361 aa16.17■□□□□ 0.18
CDK5R1-202ENST00000584716 TAF7Q15545 349 aaPredicted RBP16.17■□□□□ 0.18
CDK5R1-202ENST00000584716 WDR63Q8IWG1 891 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms