RNA–Protein interactions for RNA: ENST00000583454.1

TSEN54-209, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 3

Gene TSEN54, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-209ENST00000583454 PPP1R1BQ9UD71 204 aaPredicted RBP34.18■■■■□ 3.06
TSEN54-209ENST00000583454 ZBTB7AO95365 584 aa34.17■■■■□ 3.06
TSEN54-209ENST00000583454 PTGER2P43116 358 aa34.17■■■■□ 3.06
TSEN54-209ENST00000583454 CGNL1Q0VF96 1302 aa34.17■■■■□ 3.06
TSEN54-209ENST00000583454 DDX54Q8TDD1 881 aaKnown RBP34.17■■■■□ 3.06
TSEN54-209ENST00000583454 LY75O60449 1722 aa34.16■■■■□ 3.06
TSEN54-209ENST00000583454 LRRC4BQ9NT99 713 aa34.15■■■■□ 3.06
TSEN54-209ENST00000583454 QSER1Q2KHR3 1735 aa34.15■■■■□ 3.06
TSEN54-209ENST00000583454 ANKRD26Q9UPS8 1709 aa34.14■■■■□ 3.06
TSEN54-209ENST00000583454 NBPF6Q5VWK0 638 aa34.14■■■■□ 3.06
TSEN54-209ENST00000583454 NBPF4Q96M43 638 aa34.14■■■■□ 3.06
TSEN54-209ENST00000583454 NSD2O96028 1365 aa34.13■■■■□ 3.05
TSEN54-209ENST00000583454 TUBGCP6Q96RT7 1819 aa34.12■■■■□ 3.05
TSEN54-209ENST00000583454 INSRP06213 1382 aa34.11■■■■□ 3.05
TSEN54-209ENST00000583454 ZNF827Q17R98 1081 aa34.1■■■■□ 3.05
TSEN54-209ENST00000583454 ZCRB1Q8TBF4 217 aaKnown RBP34.09■■■■□ 3.05
TSEN54-209ENST00000583454 SGIP1Q9BQI5 828 aa34.09■■■■□ 3.05
TSEN54-209ENST00000583454 ATF5Q9Y2D1 282 aaPredicted RBP34.09■■■■□ 3.05
TSEN54-209ENST00000583454 KIF24Q5T7B8 1368 aa34.09■■■■□ 3.05
TSEN54-209ENST00000583454 HSP90AB2PQ58FF8 381 aa34.08■■■■□ 3.05
TSEN54-209ENST00000583454 USHBP1Q8N6Y0 703 aa34.08■■■■□ 3.05
TSEN54-209ENST00000583454 FLT4P35916 1363 aa34.08■■■■□ 3.05
TSEN54-209ENST00000583454 SMG6Q86US8 1419 aaKnown RBP34.06■■■■□ 3.04
TSEN54-209ENST00000583454 COL24A1Q17RW2 1714 aa34.05■■■■□ 3.04
TSEN54-209ENST00000583454 PRIM1P49642 420 aaKnown RBP34.05■■■■□ 3.04
TSEN54-209ENST00000583454 MTFR1LQ9H019 292 aa34.05■■■■□ 3.04
TSEN54-209ENST00000583454 KNSTRNQ9Y448 316 aa34.05■■■■□ 3.04
TSEN54-209ENST00000583454 UTRNP46939 3433 aa34.05■■■■□ 3.04
TSEN54-209ENST00000583454 PER1O15534 1290 aaPredicted RBP34.04■■■■□ 3.04
TSEN54-209ENST00000583454 MAP2P11137 1827 aaKnown RBP34.04■■■■□ 3.04
TSEN54-209ENST00000583454 AKT1S1Q96B36 256 aa34.03■■■■□ 3.04
TSEN54-209ENST00000583454 PKD1L3Q7Z443 1732 aa34.02■■■■□ 3.04
TSEN54-209ENST00000583454 SLC27A3Q5K4L6 730 aa34.02■■■■□ 3.04
TSEN54-209ENST00000583454 NCAPD2Q15021 1401 aa34.01■■■■□ 3.03
TSEN54-209ENST00000583454 SYTL4Q96C24 671 aaPredicted RBP34■■■■□ 3.03
TSEN54-209ENST00000583454 TOGARAM1Q9Y4F4 1720 aa34■■■■□ 3.03
TSEN54-209ENST00000583454 EMILIN1Q9Y6C2 1016 aa34■■■■□ 3.03
TSEN54-209ENST00000583454 AMER1Q5JTC6 1135 aaPredicted RBP33.99■■■■□ 3.03
TSEN54-209ENST00000583454 KCNQ4P56696 695 aa33.97■■■■□ 3.03
TSEN54-209ENST00000583454 RAPGEF4Q8WZA2 1011 aa33.97■■■■□ 3.03
TSEN54-209ENST00000583454 ITGB4P16144 1822 aa33.95■■■■□ 3.03
TSEN54-209ENST00000583454 FHDC1Q9C0D6 1143 aaPredicted RBP33.95■■■■□ 3.03
TSEN54-209ENST00000583454 TATP17735 454 aaPredicted RBP33.94■■■■□ 3.02
TSEN54-209ENST00000583454 PNPLA7Q6ZV29 1317 aa33.93■■■■□ 3.02
TSEN54-209ENST00000583454 SYT17Q9BSW7 474 aa33.92■■■■□ 3.02
TSEN54-209ENST00000583454 TAF1LQ8IZX4 1826 aa33.91■■■■□ 3.02
TSEN54-209ENST00000583454 C5P01031 1676 aa33.9■■■■□ 3.02
TSEN54-209ENST00000583454 PCDH11XQ9BZA7 1347 aa33.9■■■■□ 3.02
TSEN54-209ENST00000583454 PCDH11YQ9BZA8 1340 aa33.9■■■■□ 3.02
TSEN54-209ENST00000583454 YY1P25490 414 aa33.9■■■■□ 3.02
TSEN54-209ENST00000583454 MORC1Q86VD1 984 aa33.9■■■■□ 3.02
TSEN54-209ENST00000583454 CYP27B1O15528 508 aa33.89■■■■□ 3.02
TSEN54-209ENST00000583454 POLKQ9UBT6 870 aa33.89■■■■□ 3.02
TSEN54-209ENST00000583454 MAP3K5Q99683 1374 aa33.88■■■■□ 3.01
TSEN54-209ENST00000583454 ARXQ96QS3 562 aa33.88■■■■□ 3.01
TSEN54-209ENST00000583454 NPC1L1Q9UHC9 1359 aa33.87■■■■□ 3.01
TSEN54-209ENST00000583454 TNNT2P45379 298 aaPredicted RBP33.87■■■■□ 3.01
TSEN54-209ENST00000583454 SLC16A10Q8TF71 515 aa33.86■■■■□ 3.01
TSEN54-209ENST00000583454 CCNL1Q9UK58 526 aaPredicted RBP33.85■■■■□ 3.01
TSEN54-209ENST00000583454 GOLGB1Q14789 3259 aaKnown RBP33.84■■■■□ 3.01
TSEN54-209ENST00000583454 DCAF8L1A6NGE4 600 aa33.84■■■■□ 3.01
TSEN54-209ENST00000583454 PPM1GO15355 546 aaPredicted RBP33.83■■■■□ 3.01
TSEN54-209ENST00000583454 TFCP2L1Q9NZI6 479 aa33.82■■■■□ 3
TSEN54-209ENST00000583454 EYA1Q99502 592 aa33.8■■■■□ 3
TSEN54-209ENST00000583454 CHD4Q14839 1912 aa33.79■■■■□ 3
TSEN54-209ENST00000583454 CC2D1BQ5T0F9 858 aaKnown RBP33.79■■■■□ 3
TSEN54-209ENST00000583454 PALLDQ8WX93 1383 aa33.77■■■■□ 3
TSEN54-209ENST00000583454 NKX1-1Q15270 411 aaPredicted RBP33.77■■■■□ 3
TSEN54-209ENST00000583454 MPRIPQ6WCQ1 1025 aa33.75■■■□□ 2.99
TSEN54-209ENST00000583454 C4BP0C0L5 1744 aa33.75■■■□□ 2.99
TSEN54-209ENST00000583454 COL23A1Q86Y22 540 aaPredicted RBP33.73■■■□□ 2.99
TSEN54-209ENST00000583454 UBR3Q6ZT12 1888 aa33.72■■■□□ 2.99
TSEN54-209ENST00000583454 EIF4A2Q14240 407 aaKnown RBP33.72■■■□□ 2.99
TSEN54-209ENST00000583454 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.72■■■□□ 2.99
TSEN54-209ENST00000583454 SPG7Q9UQ90 795 aa33.71■■■□□ 2.99
TSEN54-209ENST00000583454 POLD1P28340 1107 aa33.7■■■□□ 2.99
TSEN54-209ENST00000583454 PIGBQ92521 554 aa33.7■■■□□ 2.99
TSEN54-209ENST00000583454 PLEKHG2Q9H7P9 1386 aa33.67■■■□□ 2.98
TSEN54-209ENST00000583454 IGSF1Q8N6C5 1336 aa33.66■■■□□ 2.98
TSEN54-209ENST00000583454 PHKG2P15735 406 aa33.65■■■□□ 2.98
TSEN54-209ENST00000583454 DDX10Q13206 875 aaKnown RBP33.65■■■□□ 2.98
TSEN54-209ENST00000583454 CNGB1Q14028 1251 aaPredicted RBP33.65■■■□□ 2.98
TSEN54-209ENST00000583454 SMARCC1Q92922 1105 aaPredicted RBP33.65■■■□□ 2.98
TSEN54-209ENST00000583454 MTHFSP49914 203 aa33.64■■■□□ 2.98
TSEN54-209ENST00000583454 AMIGO3Q86WK7 504 aa33.64■■■□□ 2.98
TSEN54-209ENST00000583454 NLGN2Q8NFZ4 835 aa33.62■■■□□ 2.97
TSEN54-209ENST00000583454 MSH5O43196 834 aa33.6■■■□□ 2.97
TSEN54-209ENST00000583454 IFNL2Q8IZJ0 200 aa33.6■■■□□ 2.97
TSEN54-209ENST00000583454 KLHL34Q8N239 644 aa33.6■■■□□ 2.97
TSEN54-209ENST00000583454 MSL1Q68DK7 614 aa33.59■■■□□ 2.97
TSEN54-209ENST00000583454 TMOD3Q9NYL9 352 aa33.57■■■□□ 2.96
TSEN54-209ENST00000583454 ASAP1Q9ULH1 1129 aa33.57■■■□□ 2.96
TSEN54-209ENST00000583454 LOC102724428A0A0B4J2F2 783 aa33.56■■■□□ 2.96
TSEN54-209ENST00000583454 SIK1P57059 783 aa33.56■■■□□ 2.96
TSEN54-209ENST00000583454 ZNF784Q8NCA9 323 aaPredicted RBP33.56■■■□□ 2.96
TSEN54-209ENST00000583454 FLAD1Q8NFF5 587 aa33.56■■■□□ 2.96
TSEN54-209ENST00000583454 ZNF831Q5JPB2 1677 aa33.55■■■□□ 2.96
TSEN54-209ENST00000583454 HMGB2P26583 209 aaKnown RBP33.55■■■□□ 2.96
TSEN54-209ENST00000583454 LINC00116Q8NCU8 138 aa33.55■■■□□ 2.96
TSEN54-209ENST00000583454 IL13P35225 146 aa33.54■■■□□ 2.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms