RNA–Protein interactions for RNA: ENST00000583327.2

ITGB4-209, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 699 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-209ENST00000583327 TRPC5Q9UL62 973 aaPredicted RBP18.07■□□□□ 0.48
ITGB4-209ENST00000583327 TATP17735 454 aaPredicted RBP18.06■□□□□ 0.48
ITGB4-209ENST00000583327 NFE2L2Q16236 605 aa18.06■□□□□ 0.48
ITGB4-209ENST00000583327 CDCA7Q9BWT1 371 aaPredicted RBP18.06■□□□□ 0.48
ITGB4-209ENST00000583327 RGS17Q9UGC6 210 aaPredicted RBP18.06■□□□□ 0.48
ITGB4-209ENST00000583327 MAPK8IP3Q9UPT6 1336 aa18.05■□□□□ 0.48
ITGB4-209ENST00000583327 CCDC27Q2M243 656 aa18.05■□□□□ 0.48
ITGB4-209ENST00000583327 PLEKHO1Q53GL0 409 aaPredicted RBP18.05■□□□□ 0.48
ITGB4-209ENST00000583327 QTRT2Q9H974 415 aaKnown RBP18.05■□□□□ 0.48
ITGB4-209ENST00000583327 ZNF772Q68DY9 489 aaPredicted RBP18.04■□□□□ 0.48
ITGB4-209ENST00000583327 GAS2L2Q8NHY3 880 aa18.04■□□□□ 0.48
ITGB4-209ENST00000583327 USP35Q9P2H5 1018 aa18.04■□□□□ 0.48
ITGB4-209ENST00000583327 TRIM35Q9UPQ4 493 aa18.04■□□□□ 0.48
ITGB4-209ENST00000583327 ZNF521Q96K83 1311 aa18.03■□□□□ 0.48
ITGB4-209ENST00000583327 NEFMP07197 916 aa18.03■□□□□ 0.48
ITGB4-209ENST00000583327 GLI3P10071 1580 aa18.03■□□□□ 0.48
ITGB4-209ENST00000583327 PKD1L3Q7Z443 1732 aa18.03■□□□□ 0.48
ITGB4-209ENST00000583327 HTATSF1O43719 755 aaKnown RBP18.02■□□□□ 0.48
ITGB4-209ENST00000583327 ZCRB1Q8TBF4 217 aaKnown RBP18.02■□□□□ 0.48
ITGB4-209ENST00000583327 PARP4Q9UKK3 1724 aaKnown RBP18.02■□□□□ 0.48
ITGB4-209ENST00000583327 SPG7Q9UQ90 795 aa18.02■□□□□ 0.48
ITGB4-209ENST00000583327 RIPK4P57078 832 aa18.01■□□□□ 0.47
ITGB4-209ENST00000583327 HNRNPUQ00839 825 aaKnown RBP eCLIP18.01■□□□□ 0.47
ITGB4-209ENST00000583327 CCDC9Q9Y3X0 531 aaKnown RBP18.01■□□□□ 0.47
ITGB4-209ENST00000583327 WNK3Q9BYP7 1800 aa18■□□□□ 0.47
ITGB4-209ENST00000583327 CYP27B1O15528 508 aa18■□□□□ 0.47
ITGB4-209ENST00000583327 NKX1-1Q15270 411 aaPredicted RBP18■□□□□ 0.47
ITGB4-209ENST00000583327 AKAP4Q5JQC9 854 aa18■□□□□ 0.47
ITGB4-209ENST00000583327 WWC1Q8IX03 1113 aa18■□□□□ 0.47
ITGB4-209ENST00000583327 RRP7AQ9Y3A4 280 aaKnown RBP18■□□□□ 0.47
ITGB4-209ENST00000583327 PHKG2P15735 406 aa17.99■□□□□ 0.47
ITGB4-209ENST00000583327 ZBED9Q6R2W3 1325 aa17.98■□□□□ 0.47
ITGB4-209ENST00000583327 EXOC5O00471 708 aa17.98■□□□□ 0.47
ITGB4-209ENST00000583327 FAM98CQ17RN3 349 aaKnown RBP17.98■□□□□ 0.47
ITGB4-209ENST00000583327 ZNF530Q6P9A1 599 aaPredicted RBP17.98■□□□□ 0.47
ITGB4-209ENST00000583327 IFNL2Q8IZJ0 200 aa17.98■□□□□ 0.47
ITGB4-209ENST00000583327 THSD7AQ9UPZ6 1657 aa17.98■□□□□ 0.47
ITGB4-209ENST00000583327 SHANK3Q9BYB0 1731 aa17.98■□□□□ 0.47
ITGB4-209ENST00000583327 GNAT3A8MTJ3 354 aa17.97■□□□□ 0.47
ITGB4-209ENST00000583327 RBM6P78332 1123 aaKnown RBP17.97■□□□□ 0.47
ITGB4-209ENST00000583327 NEUROD2Q15784 382 aa17.97■□□□□ 0.47
ITGB4-209ENST00000583327 IL17REQ8NFR9 667 aa17.97■□□□□ 0.47
ITGB4-209ENST00000583327 ADAMTS7Q9UKP4 1686 aa17.96■□□□□ 0.47
ITGB4-209ENST00000583327 MAP3K5Q99683 1374 aa17.96■□□□□ 0.47
ITGB4-209ENST00000583327 SENP3-EIF4A1A0A087X0R7 540 aa17.96■□□□□ 0.47
ITGB4-209ENST00000583327 LMOD3Q0VAK6 560 aa17.96■□□□□ 0.47
ITGB4-209ENST00000583327 WDR63Q8IWG1 891 aa17.96■□□□□ 0.47
ITGB4-209ENST00000583327 TNS2Q63HR2 1409 aa17.96■□□□□ 0.47
ITGB4-209ENST00000583327 PCDH11XQ9BZA7 1347 aa17.96■□□□□ 0.46
ITGB4-209ENST00000583327 PCDH11YQ9BZA8 1340 aa17.96■□□□□ 0.46
ITGB4-209ENST00000583327 CEMIPQ8WUJ3 1361 aa17.95■□□□□ 0.46
ITGB4-209ENST00000583327 DDB1Q16531 1140 aa17.95■□□□□ 0.46
ITGB4-209ENST00000583327 POTEAQ6S8J7 498 aa17.95■□□□□ 0.46
ITGB4-209ENST00000583327 DLG5Q8TDM6 1919 aa17.95■□□□□ 0.46
ITGB4-209ENST00000583327 LGR6Q9HBX8 967 aa17.94■□□□□ 0.46
ITGB4-209ENST00000583327 SALL2Q9Y467 1007 aaPredicted RBP17.94■□□□□ 0.46
ITGB4-209ENST00000583327 LRRC37A3O60309 1634 aa17.94■□□□□ 0.46
ITGB4-209ENST00000583327 HSP90AB1P08238 724 aaKnown RBP17.93■□□□□ 0.46
ITGB4-209ENST00000583327 C1orf141Q5JVX7 400 aa17.93■□□□□ 0.46
ITGB4-209ENST00000583327 TRMT2AQ8IZ69 625 aaKnown RBP17.93■□□□□ 0.46
ITGB4-209ENST00000583327 YTHDC1Q96MU7 727 aaKnown RBP17.93■□□□□ 0.46
ITGB4-209ENST00000583327 IL16Q14005 1332 aa17.93■□□□□ 0.46
ITGB4-209ENST00000583327 KDM6AO15550 1401 aaPredicted RBP17.92■□□□□ 0.46
ITGB4-209ENST00000583327 RNMTO43148 476 aaKnown RBP17.92■□□□□ 0.46
ITGB4-209ENST00000583327 PDE3BQ13370 1112 aa17.92■□□□□ 0.46
ITGB4-209ENST00000583327 DCTN1Q14203 1278 aa17.92■□□□□ 0.46
ITGB4-209ENST00000583327 SEPT12Q8IYM1 358 aa17.92■□□□□ 0.46
ITGB4-209ENST00000583327 MARCH10Q8NA82 808 aaPredicted RBP17.92■□□□□ 0.46
ITGB4-209ENST00000583327 DCAF5Q96JK2 942 aa17.92■□□□□ 0.46
ITGB4-209ENST00000583327 ZNF853P0CG23 659 aa17.91■□□□□ 0.46
ITGB4-209ENST00000583327 RXRBP28702 533 aa17.91■□□□□ 0.46
ITGB4-209ENST00000583327 MCM10Q7L590 875 aa17.91■□□□□ 0.46
ITGB4-209ENST00000583327 DDX54Q8TDD1 881 aaKnown RBP17.91■□□□□ 0.46
ITGB4-209ENST00000583327 RTF1Q92541 710 aaKnown RBP17.91■□□□□ 0.46
ITGB4-209ENST00000583327 MPRIPQ6WCQ1 1025 aa17.9■□□□□ 0.46
ITGB4-209ENST00000583327 THUMPD2Q9BTF0 503 aaKnown RBP17.9■□□□□ 0.46
ITGB4-209ENST00000583327 BCL9O00512 1426 aa17.89■□□□□ 0.46
ITGB4-209ENST00000583327 GOLGA2Q08379 1002 aa17.89■□□□□ 0.45
ITGB4-209ENST00000583327 SLFN5Q08AF3 891 aa17.89■□□□□ 0.45
ITGB4-209ENST00000583327 SPINK5Q9NQ38 1064 aaPredicted RBP17.89■□□□□ 0.45
ITGB4-209ENST00000583327 ERVV-2B6SEH9 535 aa17.88■□□□□ 0.45
ITGB4-209ENST00000583327 CALD1Q05682 793 aaKnown RBP17.88■□□□□ 0.45
ITGB4-209ENST00000583327 BABAM1Q9NWV8 329 aa17.88■□□□□ 0.45
ITGB4-209ENST00000583327 CHL1O00533 1208 aa17.87■□□□□ 0.45
ITGB4-209ENST00000583327 CDCA7LQ96GN5 454 aa17.87■□□□□ 0.45
ITGB4-209ENST00000583327 CFAP44Q96MT7 982 aa17.87■□□□□ 0.45
ITGB4-209ENST00000583327 MRC1P22897 1456 aa17.87■□□□□ 0.45
ITGB4-209ENST00000583327 SCN11AQ9UI33 1791 aa17.86■□□□□ 0.45
ITGB4-209ENST00000583327 IFT57Q9NWB7 429 aa17.86■□□□□ 0.45
ITGB4-209ENST00000583327 E9PSI1 815 aa17.85■□□□□ 0.45
ITGB4-209ENST00000583327 TAF7Q15545 349 aaPredicted RBP17.85■□□□□ 0.45
ITGB4-209ENST00000583327 SLC52A2Q9HAB3 445 aa17.85■□□□□ 0.45
ITGB4-209ENST00000583327 DUSP27Q5VZP5 1158 aa17.84■□□□□ 0.45
ITGB4-209ENST00000583327 GNAI1P63096 354 aa17.83■□□□□ 0.44
ITGB4-209ENST00000583327 SIPA1L3O60292 1781 aaPredicted RBP17.83■□□□□ 0.44
ITGB4-209ENST00000583327 RGS12O14924 1447 aa17.82■□□□□ 0.44
ITGB4-209ENST00000583327 TOGARAM1Q9Y4F4 1720 aa17.82■□□□□ 0.44
ITGB4-209ENST00000583327 KRT27Q7Z3Y8 459 aa17.82■□□□□ 0.44
ITGB4-209ENST00000583327 NFATC2IPQ8NCF5 419 aa17.82■□□□□ 0.44
ITGB4-209ENST00000583327 TEFQ10587 303 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms