RNA–Protein interactions for RNA: ENST00000583289.5

PTPRM-215, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-215ENST00000583289 LYSMD3Q7Z3D4 306 aa7.78□□□□□ -1.16
PTPRM-215ENST00000583289 CYP2U1Q7Z449 544 aa7.78□□□□□ -1.16
PTPRM-215ENST00000583289 GPC1P35052 558 aa7.77□□□□□ -1.17
PTPRM-215ENST00000583289 RNF144AP50876 292 aaPredicted RBP7.77□□□□□ -1.17
PTPRM-215ENST00000583289 ESF1Q9H501 851 aaKnown RBP7.77□□□□□ -1.17
PTPRM-215ENST00000583289 PCDHB11Q9Y5F2 797 aa7.76□□□□□ -1.17
PTPRM-215ENST00000583289 DCAF1Q9Y4B6 1507 aa7.75□□□□□ -1.17
PTPRM-215ENST00000583289 SENP3-EIF4A1A0A087X0R7 540 aa7.75□□□□□ -1.17
PTPRM-215ENST00000583289 SV2AQ7L0J3 742 aa7.75□□□□□ -1.17
PTPRM-215ENST00000583289 A0A1W2PRU2 124 aa7.74□□□□□ -1.17
PTPRM-215ENST00000583289 EIF4G2P78344 907 aaKnown RBP eCLIP7.74□□□□□ -1.17
PTPRM-215ENST00000583289 GPR161Q8N6U8 529 aaKnown RBP7.74□□□□□ -1.17
PTPRM-215ENST00000583289 COL25A1Q9BXS0 654 aaPredicted RBP7.74□□□□□ -1.17
PTPRM-215ENST00000583289 TBC1D2BQ9UPU7 963 aa7.74□□□□□ -1.17
PTPRM-215ENST00000583289 CDC14CA4D256 554 aa7.73□□□□□ -1.17
PTPRM-215ENST00000583289 MEN1O00255 615 aa7.73□□□□□ -1.17
PTPRM-215ENST00000583289 SCTRP47872 440 aa7.73□□□□□ -1.17
PTPRM-215ENST00000583289 NLRP3Q96P20 1036 aa7.73□□□□□ -1.17
PTPRM-215ENST00000583289 TRAK2O60296 914 aa7.72□□□□□ -1.17
PTPRM-215ENST00000583289 MYCP01106 439 aaPredicted RBP7.72□□□□□ -1.17
PTPRM-215ENST00000583289 KRT76Q01546 638 aa7.72□□□□□ -1.17
PTPRM-215ENST00000583289 CLN3Q13286 438 aa7.72□□□□□ -1.17
PTPRM-215ENST00000583289 PRICKLE2Q7Z3G6 844 aa7.72□□□□□ -1.17
PTPRM-215ENST00000583289 VWA5B2Q8N398 1253 aa7.72□□□□□ -1.17
PTPRM-215ENST00000583289 CNTNAP3BQ96NU0 1288 aa7.72□□□□□ -1.17
PTPRM-215ENST00000583289 CNTNAP3Q9BZ76 1288 aa7.72□□□□□ -1.17
PTPRM-215ENST00000583289 CEP126Q9P2H0 1117 aa7.72□□□□□ -1.17
PTPRM-215ENST00000583289 SLC27A3Q5K4L6 730 aa7.71□□□□□ -1.18
PTPRM-215ENST00000583289 GMCL1Q96IK5 515 aa7.71□□□□□ -1.18
PTPRM-215ENST00000583289 OSBPL3Q9H4L5 887 aa7.71□□□□□ -1.18
PTPRM-215ENST00000583289 GNRH1P01148 92 aa7.7□□□□□ -1.18
PTPRM-215ENST00000583289 ARHGEF10LQ9HCE6 1279 aa7.7□□□□□ -1.18
PTPRM-215ENST00000583289 DYRK1BQ9Y463 629 aa7.69□□□□□ -1.18
PTPRM-215ENST00000583289 RHOQP17081 205 aa7.68□□□□□ -1.18
PTPRM-215ENST00000583289 IRF5Q13568 498 aa7.68□□□□□ -1.18
PTPRM-215ENST00000583289 WDR44Q5JSH3 913 aa7.68□□□□□ -1.18
PTPRM-215ENST00000583289 RNFT1Q5M7Z0 435 aa7.68□□□□□ -1.18
PTPRM-215ENST00000583289 TRIM22Q8IYM9 498 aa7.68□□□□□ -1.18
PTPRM-215ENST00000583289 CCDC85AQ96PX6 553 aaPredicted RBP7.68□□□□□ -1.18
PTPRM-215ENST00000583289 GRIP2Q9C0E4 1043 aa7.68□□□□□ -1.18
PTPRM-215ENST00000583289 SPATA31C2B4DYI2 1134 aa7.67□□□□□ -1.18
PTPRM-215ENST00000583289 H7C1W4 665 aa7.67□□□□□ -1.18
PTPRM-215ENST00000583289 SLURP2P0DP57 97 aa7.67□□□□□ -1.18
PTPRM-215ENST00000583289 WASHC4Q2M389 1173 aa7.67□□□□□ -1.18
PTPRM-215ENST00000583289 SLFNL1Q499Z3 407 aa7.67□□□□□ -1.18
PTPRM-215ENST00000583289 NBPF10Q6P3W6 841 aaKnown RBP7.67□□□□□ -1.18
PTPRM-215ENST00000583289 FOXR1Q6PIV2 292 aa7.67□□□□□ -1.18
PTPRM-215ENST00000583289 NBPF15Q8N660 670 aa7.67□□□□□ -1.18
PTPRM-215ENST00000583289 ESYT1Q9BSJ8 1104 aa7.67□□□□□ -1.18
PTPRM-215ENST00000583289 DOLKQ9UPQ8 538 aa7.67□□□□□ -1.18
PTPRM-215ENST00000583289 ABL2P42684 1182 aa7.66□□□□□ -1.18
PTPRM-215ENST00000583289 USP4Q13107 963 aa7.66□□□□□ -1.18
PTPRM-215ENST00000583289 TAS1R3Q7RTX0 852 aa7.66□□□□□ -1.18
PTPRM-215ENST00000583289 ZNF837Q96EG3 531 aaPredicted RBP7.66□□□□□ -1.18
PTPRM-215ENST00000583289 GDPD2Q9HCC8 539 aa7.66□□□□□ -1.18
PTPRM-215ENST00000583289 WASLO00401 505 aaPredicted RBP7.65□□□□□ -1.18
PTPRM-215ENST00000583289 VAC14Q08AM6 782 aa7.65□□□□□ -1.18
PTPRM-215ENST00000583289 POU4F2Q12837 409 aa7.65□□□□□ -1.18
PTPRM-215ENST00000583289 MCM6Q14566 821 aa7.65□□□□□ -1.18
PTPRM-215ENST00000583289 ESCO1Q5FWF5 840 aa7.65□□□□□ -1.18
PTPRM-215ENST00000583289 RIPOR1Q6ZS17 1223 aa7.65□□□□□ -1.18
PTPRM-215ENST00000583289 RNF135Q8IUD6 432 aa7.65□□□□□ -1.18
PTPRM-215ENST00000583289 PHTF2Q8N3S3 785 aa7.65□□□□□ -1.18
PTPRM-215ENST00000583289 SVOPQ8N4V2 548 aa7.65□□□□□ -1.18
PTPRM-215ENST00000583289 CNKSR1Q969H4 720 aa7.65□□□□□ -1.18
PTPRM-215ENST00000583289 SIRT1Q96EB6 747 aa7.65□□□□□ -1.18
PTPRM-215ENST00000583289 CDCA7Q9BWT1 371 aaPredicted RBP7.65□□□□□ -1.18
PTPRM-215ENST00000583289 RAB6BQ9NRW1 208 aa7.65□□□□□ -1.18
PTPRM-215ENST00000583289 CUEDC1Q9NWM3 386 aaPredicted RBP7.65□□□□□ -1.18
PTPRM-215ENST00000583289 SHROOM4Q9ULL8 1493 aa7.64□□□□□ -1.19
PTPRM-215ENST00000583289 RNF225M0QZC1 329 aaPredicted RBP7.64□□□□□ -1.19
PTPRM-215ENST00000583289 GTF2E1P29083 439 aaPredicted RBP7.64□□□□□ -1.19
PTPRM-215ENST00000583289 SOX11P35716 441 aa7.64□□□□□ -1.19
PTPRM-215ENST00000583289 SRSF11Q05519 484 aaKnown RBP7.64□□□□□ -1.19
PTPRM-215ENST00000583289 TIMMDC1Q9NPL8 285 aa7.64□□□□□ -1.19
PTPRM-215ENST00000583289 IL2RAP01589 272 aa7.63□□□□□ -1.19
PTPRM-215ENST00000583289 PRKCSHP14314 528 aaPredicted RBP7.63□□□□□ -1.19
PTPRM-215ENST00000583289 CENPCQ03188 943 aa7.63□□□□□ -1.19
PTPRM-215ENST00000583289 ZNF385CQ66K41 422 aaPredicted RBP7.63□□□□□ -1.19
PTPRM-215ENST00000583289 GAS2L1Q99501 681 aaPredicted RBP7.63□□□□□ -1.19
PTPRM-215ENST00000583289 CHIC2Q9UKJ5 165 aa7.63□□□□□ -1.19
PTPRM-215ENST00000583289 ADAMTS2O95450 1211 aa7.62□□□□□ -1.19
PTPRM-215ENST00000583289 SEMA3FQ13275 785 aa7.62□□□□□ -1.19
PTPRM-215ENST00000583289 GAS6Q14393 721 aa7.62□□□□□ -1.19
PTPRM-215ENST00000583289 DBN1Q16643 649 aa7.62□□□□□ -1.19
PTPRM-215ENST00000583289 MAP7D1Q3KQU3 841 aa7.62□□□□□ -1.19
PTPRM-215ENST00000583289 XAGE2Q96GT9 111 aa7.62□□□□□ -1.19
PTPRM-215ENST00000583289 TRERF1Q96PN7 1200 aa7.62□□□□□ -1.19
PTPRM-215ENST00000583289 ZSCAN10Q96SZ4 725 aaPredicted RBP7.62□□□□□ -1.19
PTPRM-215ENST00000583289 MBIPQ9NS73 344 aa7.62□□□□□ -1.19
PTPRM-215ENST00000583289 F11P03951 625 aa7.61□□□□□ -1.19
PTPRM-215ENST00000583289 GNASQ5JWF2 1037 aa7.61□□□□□ -1.19
PTPRM-215ENST00000583289 ADAMTS8Q9UP79 889 aa7.61□□□□□ -1.19
PTPRM-215ENST00000583289 HRH3Q9Y5N1 445 aa7.61□□□□□ -1.19
PTPRM-215ENST00000583289 A0A1B0GTH6 734 aa7.6□□□□□ -1.19
PTPRM-215ENST00000583289 MAP3K10Q02779 954 aa7.6□□□□□ -1.19
PTPRM-215ENST00000583289 KCNMA1Q12791 1236 aa7.6□□□□□ -1.19
PTPRM-215ENST00000583289 OXLD1Q5BKU9 147 aa7.6□□□□□ -1.19
PTPRM-215ENST00000583289 TMEM214Q6NUQ4 689 aaKnown RBP7.6□□□□□ -1.19
PTPRM-215ENST00000583289 WWC1Q8IX03 1113 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms