RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 TNS2Q63HR2 1409 aa29.11■■■□□ 2.25
TSEN54-208ENST00000583173 SULT6B1Q6IMI4 303 aa29.1■■■□□ 2.25
TSEN54-208ENST00000583173 FAM196AQ6ZSG2 479 aa29.1■■■□□ 2.25
TSEN54-208ENST00000583173 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.09■■■□□ 2.25
TSEN54-208ENST00000583173 EP400Q96L91 3159 aa29.09■■■□□ 2.25
TSEN54-208ENST00000583173 BCL9O00512 1426 aa29.08■■■□□ 2.25
TSEN54-208ENST00000583173 PLEKHG2Q9H7P9 1386 aa29.07■■■□□ 2.24
TSEN54-208ENST00000583173 HMOX1P09601 288 aa29.03■■■□□ 2.24
TSEN54-208ENST00000583173 DDX54Q8TDD1 881 aaKnown RBP29.03■■■□□ 2.24
TSEN54-208ENST00000583173 NUDCQ9Y266 331 aa29.03■■■□□ 2.24
TSEN54-208ENST00000583173 CYP27B1O15528 508 aa29.02■■■□□ 2.24
TSEN54-208ENST00000583173 U2SURPO15042 1029 aaKnown RBP29.01■■■□□ 2.23
TSEN54-208ENST00000583173 SPG7Q9UQ90 795 aa29.01■■■□□ 2.23
TSEN54-208ENST00000583173 CCDC125Q86Z20 511 aa29■■■□□ 2.23
TSEN54-208ENST00000583173 ANP32CO43423 234 aa28.98■■■□□ 2.23
TSEN54-208ENST00000583173 NKX1-1Q15270 411 aaPredicted RBP28.98■■■□□ 2.23
TSEN54-208ENST00000583173 PLEKHO1Q53GL0 409 aaPredicted RBP28.98■■■□□ 2.23
TSEN54-208ENST00000583173 RSPH6AQ9H0K4 717 aa28.98■■■□□ 2.23
TSEN54-208ENST00000583173 SHANK3Q9BYB0 1731 aa28.97■■■□□ 2.23
TSEN54-208ENST00000583173 AMOTQ4VCS5 1084 aa28.97■■■□□ 2.23
TSEN54-208ENST00000583173 PCDH11XQ9BZA7 1347 aa28.96■■■□□ 2.23
TSEN54-208ENST00000583173 PCDH11YQ9BZA8 1340 aa28.96■■■□□ 2.23
TSEN54-208ENST00000583173 FCHSD2O94868 740 aa28.96■■■□□ 2.23
TSEN54-208ENST00000583173 TRIM37O94972 964 aa28.96■■■□□ 2.23
TSEN54-208ENST00000583173 U2AF1L5P0DN76 240 aaPredicted RBP28.96■■■□□ 2.23
TSEN54-208ENST00000583173 U2AF1Q01081 240 aaKnown RBP eCLIP28.96■■■□□ 2.23
TSEN54-208ENST00000583173 PKD1L3Q7Z443 1732 aa28.95■■■□□ 2.23
TSEN54-208ENST00000583173 PTF1AQ7RTS3 328 aa28.95■■■□□ 2.22
TSEN54-208ENST00000583173 PHKG2P15735 406 aa28.94■■■□□ 2.22
TSEN54-208ENST00000583173 CCDC184Q52MB2 194 aa28.93■■■□□ 2.22
TSEN54-208ENST00000583173 BCL11BQ9C0K0 894 aaPredicted RBP28.93■■■□□ 2.22
TSEN54-208ENST00000583173 KCNQ2O43526 872 aa28.92■■■□□ 2.22
TSEN54-208ENST00000583173 IFNL2Q8IZJ0 200 aa28.92■■■□□ 2.22
TSEN54-208ENST00000583173 PHACTR3Q96KR7 559 aa28.91■■■□□ 2.22
TSEN54-208ENST00000583173 MTHFSDQ2M296 383 aaKnown RBP28.9■■■□□ 2.22
TSEN54-208ENST00000583173 PRKAR2BP31323 418 aa28.89■■■□□ 2.22
TSEN54-208ENST00000583173 PLEKHF1Q96S99 279 aa28.89■■■□□ 2.22
TSEN54-208ENST00000583173 ZNF530Q6P9A1 599 aaPredicted RBP28.88■■■□□ 2.21
TSEN54-208ENST00000583173 ACSBG1Q96GR2 724 aa28.88■■■□□ 2.21
TSEN54-208ENST00000583173 SBF2Q86WG5 1849 aa28.87■■■□□ 2.21
TSEN54-208ENST00000583173 PRIM1P49642 420 aaKnown RBP28.86■■■□□ 2.21
TSEN54-208ENST00000583173 AKAP4Q5JQC9 854 aa28.84■■■□□ 2.21
TSEN54-208ENST00000583173 APBA3O96018 575 aa28.83■■■□□ 2.21
TSEN54-208ENST00000583173 DEFB132Q7Z7B7 95 aa28.83■■■□□ 2.21
TSEN54-208ENST00000583173 ADAMTS8Q9UP79 889 aa28.83■■■□□ 2.21
TSEN54-208ENST00000583173 HSP90AB1P08238 724 aaKnown RBP28.82■■■□□ 2.2
TSEN54-208ENST00000583173 SF3B2Q13435 895 aaKnown RBP28.82■■■□□ 2.2
TSEN54-208ENST00000583173 PLSCR1O15162 318 aa28.81■■■□□ 2.2
TSEN54-208ENST00000583173 DCAF5Q96JK2 942 aa28.81■■■□□ 2.2
TSEN54-208ENST00000583173 CAMKK2Q96RR4 588 aa28.81■■■□□ 2.2
TSEN54-208ENST00000583173 C1orf141Q5JVX7 400 aa28.8■■■□□ 2.2
TSEN54-208ENST00000583173 GAS2L2Q8NHY3 880 aa28.8■■■□□ 2.2
TSEN54-208ENST00000583173 ERVV-2B6SEH9 535 aa28.79■■■□□ 2.2
TSEN54-208ENST00000583173 PNISRQ8TF01 805 aaKnown RBP28.79■■■□□ 2.2
TSEN54-208ENST00000583173 TNS1Q9HBL0 1735 aaKnown RBP28.79■■■□□ 2.2
TSEN54-208ENST00000583173 KDM6AO15550 1401 aaPredicted RBP28.78■■■□□ 2.2
TSEN54-208ENST00000583173 BAG6P46379 1132 aa28.78■■■□□ 2.2
TSEN54-208ENST00000583173 EN1Q05925 392 aaPredicted RBP28.78■■■□□ 2.2
TSEN54-208ENST00000583173 MPRIPQ6WCQ1 1025 aa28.78■■■□□ 2.2
TSEN54-208ENST00000583173 PNNQ9H307 717 aaKnown RBP28.78■■■□□ 2.2
TSEN54-208ENST00000583173 LGR6Q9HBX8 967 aa28.77■■■□□ 2.2
TSEN54-208ENST00000583173 NHSQ6T4R5 1651 aa28.77■■■□□ 2.2
TSEN54-208ENST00000583173 WDR43Q15061 677 aaKnown RBP eCLIP28.76■■■□□ 2.19
TSEN54-208ENST00000583173 DIEXFQ68CQ4 756 aaKnown RBP28.76■■■□□ 2.19
TSEN54-208ENST00000583173 PROM2Q8N271 834 aa28.76■■■□□ 2.19
TSEN54-208ENST00000583173 PIGBQ92521 554 aa28.76■■■□□ 2.19
TSEN54-208ENST00000583173 RNMTO43148 476 aaKnown RBP28.75■■■□□ 2.19
TSEN54-208ENST00000583173 IL17REQ8NFR9 667 aa28.74■■■□□ 2.19
TSEN54-208ENST00000583173 SYTL4Q96C24 671 aaPredicted RBP28.74■■■□□ 2.19
TSEN54-208ENST00000583173 MRS2Q9HD23 443 aa28.74■■■□□ 2.19
TSEN54-208ENST00000583173 GNAT3A8MTJ3 354 aa28.73■■■□□ 2.19
TSEN54-208ENST00000583173 EZH2Q15910 746 aaKnown RBP28.73■■■□□ 2.19
TSEN54-208ENST00000583173 TOGARAM1Q9Y4F4 1720 aa28.73■■■□□ 2.19
TSEN54-208ENST00000583173 KAT6BQ8WYB5 2073 aa28.73■■■□□ 2.19
TSEN54-208ENST00000583173 DOT1LQ8TEK3 1739 aa28.71■■■□□ 2.19
TSEN54-208ENST00000583173 RUNDC1Q96C34 613 aa28.7■■■□□ 2.18
TSEN54-208ENST00000583173 MAP3K5Q99683 1374 aa28.7■■■□□ 2.18
TSEN54-208ENST00000583173 HTATSF1O43719 755 aaKnown RBP28.69■■■□□ 2.18
TSEN54-208ENST00000583173 NFE2L2Q16236 605 aa28.69■■■□□ 2.18
TSEN54-208ENST00000583173 NFATC2IPQ8NCF5 419 aa28.68■■■□□ 2.18
TSEN54-208ENST00000583173 TMOD3Q9NYL9 352 aa28.68■■■□□ 2.18
TSEN54-208ENST00000583173 ADAMTS7Q9UKP4 1686 aa28.67■■■□□ 2.18
TSEN54-208ENST00000583173 CEMIPQ8WUJ3 1361 aa28.67■■■□□ 2.18
TSEN54-208ENST00000583173 CABP4P57796 275 aa28.67■■■□□ 2.18
TSEN54-208ENST00000583173 CCDC146Q8IYE0 955 aa28.67■■■□□ 2.18
TSEN54-208ENST00000583173 BTAF1O14981 1849 aa28.66■■■□□ 2.18
TSEN54-208ENST00000583173 NEFMP07197 916 aa28.66■■■□□ 2.18
TSEN54-208ENST00000583173 SLC52A2Q9HAB3 445 aa28.66■■■□□ 2.18
TSEN54-208ENST00000583173 ITGB4P16144 1822 aa28.66■■■□□ 2.18
TSEN54-208ENST00000583173 TMPOP42166 694 aaKnown RBP28.65■■■□□ 2.18
TSEN54-208ENST00000583173 TXNRD1Q16881 649 aa28.65■■■□□ 2.18
TSEN54-208ENST00000583173 ATG3Q9NT62 314 aa28.65■■■□□ 2.18
TSEN54-208ENST00000583173 CCER2I3L3R5 266 aa28.64■■■□□ 2.18
TSEN54-208ENST00000583173 ASAP1Q9ULH1 1129 aa28.64■■■□□ 2.18
TSEN54-208ENST00000583173 MAPK8IP3Q9UPT6 1336 aa28.64■■■□□ 2.17
TSEN54-208ENST00000583173 SCN11AQ9UI33 1791 aa28.62■■■□□ 2.17
TSEN54-208ENST00000583173 MIER1Q8N108 512 aa28.62■■■□□ 2.17
TSEN54-208ENST00000583173 SMARCC1Q92922 1105 aaPredicted RBP28.61■■■□□ 2.17
TSEN54-208ENST00000583173 LRRC4BQ9NT99 713 aa28.61■■■□□ 2.17
TSEN54-208ENST00000583173 MRC1P22897 1456 aa28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms