RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 ANKRD36BQ8N2N9 1353 aa22.86■■□□□ 1.25
SREBF1-221ENST00000583080 SYTL4Q96C24 671 aaPredicted RBP22.85■■□□□ 1.25
SREBF1-221ENST00000583080 PRIM1P49642 420 aaKnown RBP22.84■■□□□ 1.25
SREBF1-221ENST00000583080 KLHL34Q8N239 644 aa22.84■■□□□ 1.25
SREBF1-221ENST00000583080 COG3Q96JB2 828 aa22.84■■□□□ 1.25
SREBF1-221ENST00000583080 ST20-MTHFSA0A0A6YYL1 179 aa22.81■■□□□ 1.24
SREBF1-221ENST00000583080 AMPHP49418 695 aa22.81■■□□□ 1.24
SREBF1-221ENST00000583080 SLC16A10Q8TF71 515 aa22.81■■□□□ 1.24
SREBF1-221ENST00000583080 TFCP2L1Q9NZI6 479 aa22.81■■□□□ 1.24
SREBF1-221ENST00000583080 POLD1P28340 1107 aa22.8■■□□□ 1.24
SREBF1-221ENST00000583080 GPR162Q16538 588 aa22.8■■□□□ 1.24
SREBF1-221ENST00000583080 RTL1A6NKG5 1358 aa22.79■■□□□ 1.24
SREBF1-221ENST00000583080 ZCRB1Q8TBF4 217 aaKnown RBP22.79■■□□□ 1.24
SREBF1-221ENST00000583080 RRS1Q15050 365 aaKnown RBP22.78■■□□□ 1.24
SREBF1-221ENST00000583080 USHBP1Q8N6Y0 703 aa22.78■■□□□ 1.24
SREBF1-221ENST00000583080 NLGN2Q8NFZ4 835 aa22.78■■□□□ 1.24
SREBF1-221ENST00000583080 NBPF6Q5VWK0 638 aa22.76■■□□□ 1.23
SREBF1-221ENST00000583080 PELP1Q8IZL8 1130 aaKnown RBP22.76■■□□□ 1.23
SREBF1-221ENST00000583080 NBPF4Q96M43 638 aa22.76■■□□□ 1.23
SREBF1-221ENST00000583080 CCNL1Q9UK58 526 aaPredicted RBP22.76■■□□□ 1.23
SREBF1-221ENST00000583080 GGNBP2Q9H3C7 697 aa22.74■■□□□ 1.23
SREBF1-221ENST00000583080 SENP3-EIF4A1A0A087X0R7 540 aa22.73■■□□□ 1.23
SREBF1-221ENST00000583080 C1QTNF8P60827 252 aa22.73■■□□□ 1.23
SREBF1-221ENST00000583080 C5P01031 1676 aa22.73■■□□□ 1.23
SREBF1-221ENST00000583080 GOLGB1Q14789 3259 aaKnown RBP22.73■■□□□ 1.23
SREBF1-221ENST00000583080 USP47Q96K76 1375 aa22.73■■□□□ 1.23
SREBF1-221ENST00000583080 FYB1O15117 783 aa22.72■■□□□ 1.23
SREBF1-221ENST00000583080 KIF20BQ96Q89 1820 aa22.71■■□□□ 1.23
SREBF1-221ENST00000583080 COL23A1Q86Y22 540 aaPredicted RBP22.71■■□□□ 1.23
SREBF1-221ENST00000583080 SMG6Q86US8 1419 aaKnown RBP22.71■■□□□ 1.23
SREBF1-221ENST00000583080 TOGARAM1Q9Y4F4 1720 aa22.7■■□□□ 1.22
SREBF1-221ENST00000583080 MSH5O43196 834 aa22.69■■□□□ 1.22
SREBF1-221ENST00000583080 YBX3P16989 372 aaKnown RBP eCLIP22.69■■□□□ 1.22
SREBF1-221ENST00000583080 MSL1Q68DK7 614 aa22.69■■□□□ 1.22
SREBF1-221ENST00000583080 RAPGEF4Q8WZA2 1011 aa22.69■■□□□ 1.22
SREBF1-221ENST00000583080 CGNL1Q0VF96 1302 aa22.68■■□□□ 1.22
SREBF1-221ENST00000583080 TAF1LQ8IZX4 1826 aa22.67■■□□□ 1.22
SREBF1-221ENST00000583080 HSP90AB2PQ58FF8 381 aa22.67■■□□□ 1.22
SREBF1-221ENST00000583080 INSRP06213 1382 aa22.66■■□□□ 1.22
SREBF1-221ENST00000583080 TATP17735 454 aaPredicted RBP22.66■■□□□ 1.22
SREBF1-221ENST00000583080 FLT4P35916 1363 aa22.65■■□□□ 1.22
SREBF1-221ENST00000583080 PALLDQ8WX93 1383 aa22.65■■□□□ 1.22
SREBF1-221ENST00000583080 PCDH11XQ9BZA7 1347 aa22.65■■□□□ 1.22
SREBF1-221ENST00000583080 PCDH11YQ9BZA8 1340 aa22.65■■□□□ 1.22
SREBF1-221ENST00000583080 SLC24A1O60721 1099 aa22.64■■□□□ 1.21
SREBF1-221ENST00000583080 GIGYF1O75420 1035 aaPredicted RBP22.64■■□□□ 1.21
SREBF1-221ENST00000583080 TMF1P82094 1093 aa22.64■■□□□ 1.21
SREBF1-221ENST00000583080 PKD1L3Q7Z443 1732 aa22.64■■□□□ 1.21
SREBF1-221ENST00000583080 C4BP0C0L5 1744 aa22.62■■□□□ 1.21
SREBF1-221ENST00000583080 ITGB4P16144 1822 aa22.62■■□□□ 1.21
SREBF1-221ENST00000583080 CYP27B1O15528 508 aa22.62■■□□□ 1.21
SREBF1-221ENST00000583080 MPRIPQ6WCQ1 1025 aa22.61■■□□□ 1.21
SREBF1-221ENST00000583080 AMIGO3Q86WK7 504 aa22.6■■□□□ 1.21
SREBF1-221ENST00000583080 EMILIN1Q9Y6C2 1016 aa22.6■■□□□ 1.21
SREBF1-221ENST00000583080 KIF24Q5T7B8 1368 aa22.6■■□□□ 1.21
SREBF1-221ENST00000583080 NCAPD2Q15021 1401 aa22.58■■□□□ 1.21
SREBF1-221ENST00000583080 NSD3Q9BZ95 1437 aa22.58■■□□□ 1.21
SREBF1-221ENST00000583080 ANKRD26Q9UPS8 1709 aa22.58■■□□□ 1.21
SREBF1-221ENST00000583080 GRIN3BO60391 1043 aa22.58■■□□□ 1.21
SREBF1-221ENST00000583080 UBR3Q6ZT12 1888 aa22.58■■□□□ 1.2
SREBF1-221ENST00000583080 CARD14Q9BXL6 1004 aa22.57■■□□□ 1.2
SREBF1-221ENST00000583080 ATP10DQ9P241 1426 aa22.57■■□□□ 1.2
SREBF1-221ENST00000583080 SMIM5Q71RC9 77 aa22.56■■□□□ 1.2
SREBF1-221ENST00000583080 MAP2P11137 1827 aaKnown RBP22.55■■□□□ 1.2
SREBF1-221ENST00000583080 CD2APQ9Y5K6 639 aa22.55■■□□□ 1.2
SREBF1-221ENST00000583080 FLAD1Q8NFF5 587 aa22.54■■□□□ 1.2
SREBF1-221ENST00000583080 PIGBQ92521 554 aa22.54■■□□□ 1.2
SREBF1-221ENST00000583080 AK7Q96M32 723 aa22.54■■□□□ 1.2
SREBF1-221ENST00000583080 PHF14O94880 888 aa22.53■■□□□ 1.2
SREBF1-221ENST00000583080 SMARCC1Q92922 1105 aaPredicted RBP22.52■■□□□ 1.2
SREBF1-221ENST00000583080 PPM1GO15355 546 aaPredicted RBP22.51■■□□□ 1.19
SREBF1-221ENST00000583080 CDCA8Q53HL2 280 aa22.51■■□□□ 1.19
SREBF1-221ENST00000583080 ADCY9O60503 1353 aa22.5■■□□□ 1.19
SREBF1-221ENST00000583080 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.5■■□□□ 1.19
SREBF1-221ENST00000583080 NKX1-1Q15270 411 aaPredicted RBP22.5■■□□□ 1.19
SREBF1-221ENST00000583080 LINC00116Q8NCU8 138 aa22.5■■□□□ 1.19
SREBF1-221ENST00000583080 WWC3Q9ULE0 1092 aa22.5■■□□□ 1.19
SREBF1-221ENST00000583080 IGSF1Q8N6C5 1336 aa22.48■■□□□ 1.19
SREBF1-221ENST00000583080 LOC102724428A0A0B4J2F2 783 aa22.47■■□□□ 1.19
SREBF1-221ENST00000583080 HMGB2P26583 209 aaKnown RBP22.47■■□□□ 1.19
SREBF1-221ENST00000583080 SIK1P57059 783 aa22.47■■□□□ 1.19
SREBF1-221ENST00000583080 EYA1Q99502 592 aa22.47■■□□□ 1.19
SREBF1-221ENST00000583080 SPG7Q9UQ90 795 aa22.47■■□□□ 1.19
SREBF1-221ENST00000583080 WASHC2AQ641Q2 1341 aa22.47■■□□□ 1.19
SREBF1-221ENST00000583080 ITPK1Q13572 414 aa22.46■■□□□ 1.19
SREBF1-221ENST00000583080 SSFA2P28290 1259 aa22.45■■□□□ 1.18
SREBF1-221ENST00000583080 TMOD3Q9NYL9 352 aa22.45■■□□□ 1.18
SREBF1-221ENST00000583080 ASAP1Q9ULH1 1129 aa22.45■■□□□ 1.18
SREBF1-221ENST00000583080 CEP350Q5VT06 3117 aa22.45■■□□□ 1.18
SREBF1-221ENST00000583080 ZNF526Q8TF50 670 aaPredicted RBP22.44■■□□□ 1.18
SREBF1-221ENST00000583080 GNPATO15228 680 aa22.43■■□□□ 1.18
SREBF1-221ENST00000583080 PHKG2P15735 406 aa22.43■■□□□ 1.18
SREBF1-221ENST00000583080 GPBP1L1Q9HC44 474 aaPredicted RBP22.43■■□□□ 1.18
SREBF1-221ENST00000583080 POLKQ9UBT6 870 aa22.42■■□□□ 1.18
SREBF1-221ENST00000583080 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.41■■□□□ 1.18
SREBF1-221ENST00000583080 KIAA1551Q9HCM1 1747 aa22.4■■□□□ 1.18
SREBF1-221ENST00000583080 KDRP35968 1356 aa22.4■■□□□ 1.18
SREBF1-221ENST00000583080 CICQ96RK0 1608 aaPredicted RBP22.4■■□□□ 1.18
SREBF1-221ENST00000583080 ATP6V1AP38606 617 aa22.4■■□□□ 1.18
SREBF1-221ENST00000583080 IFNL2Q8IZJ0 200 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms