RNA–Protein interactions for RNA: ENST00000583066.5

NDEL1-216, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5

Gene NDEL1, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-216ENST00000583066 GPBP1L1Q9HC44 474 aaPredicted RBP9.21□□□□□ -0.94
NDEL1-216ENST00000583066 GTF3C3Q9Y5Q9 886 aa9.21□□□□□ -0.94
NDEL1-216ENST00000583066 WDR90Q96KV7 1748 aa9.21□□□□□ -0.94
NDEL1-216ENST00000583066 ADCY9O60503 1353 aa9.21□□□□□ -0.94
NDEL1-216ENST00000583066 PAPPAQ13219 1627 aa9.2□□□□□ -0.94
NDEL1-216ENST00000583066 TOPAZ1Q8N9V7 1692 aa9.2□□□□□ -0.94
NDEL1-216ENST00000583066 COL24A1Q17RW2 1714 aa9.2□□□□□ -0.94
NDEL1-216ENST00000583066 STK25O00506 426 aa9.2□□□□□ -0.94
NDEL1-216ENST00000583066 SLC15A2Q16348 729 aa9.2□□□□□ -0.94
NDEL1-216ENST00000583066 PMFBP1Q8TBY8 1022 aa9.2□□□□□ -0.94
NDEL1-216ENST00000583066 STK32BQ9NY57 414 aa9.2□□□□□ -0.94
NDEL1-216ENST00000583066 OVOS2A0A0G2JMS6 1433 aa9.2□□□□□ -0.94
NDEL1-216ENST00000583066 OVOS2A0A0J9YW53 1432 aa9.2□□□□□ -0.94
NDEL1-216ENST00000583066 OVOS2Q6IE36 1432 aa9.2□□□□□ -0.94
NDEL1-216ENST00000583066 STK24Q9Y6E0 443 aa9.19□□□□□ -0.94
NDEL1-216ENST00000583066 ATP7BP35670 1465 aa9.19□□□□□ -0.94
NDEL1-216ENST00000583066 LMO7Q8WWI1 1683 aa9.19□□□□□ -0.94
NDEL1-216ENST00000583066 CCER2I3L3R5 266 aa9.18□□□□□ -0.94
NDEL1-216ENST00000583066 IRX5P78411 483 aaPredicted RBP9.18□□□□□ -0.94
NDEL1-216ENST00000583066 LARP1Q6PKG0 1096 aaKnown RBP9.18□□□□□ -0.94
NDEL1-216ENST00000583066 EFCAB3Q8N7B9 438 aa9.18□□□□□ -0.94
NDEL1-216ENST00000583066 COLQQ9Y215 455 aaPredicted RBP9.18□□□□□ -0.94
NDEL1-216ENST00000583066 WNK3Q9BYP7 1800 aa9.17□□□□□ -0.94
NDEL1-216ENST00000583066 AKAP12Q02952 1782 aa9.17□□□□□ -0.94
NDEL1-216ENST00000583066 PCNTO95613 3336 aa9.17□□□□□ -0.94
NDEL1-216ENST00000583066 APLP1P51693 650 aa9.17□□□□□ -0.94
NDEL1-216ENST00000583066 MKRN3Q13064 507 aaKnown RBP9.17□□□□□ -0.94
NDEL1-216ENST00000583066 TXNRD1Q16881 649 aa9.17□□□□□ -0.94
NDEL1-216ENST00000583066 HS6ST3Q8IZP7 471 aa9.17□□□□□ -0.94
NDEL1-216ENST00000583066 TUBGCP6Q96RT7 1819 aa9.17□□□□□ -0.94
NDEL1-216ENST00000583066 KIF3CO14782 793 aa9.16□□□□□ -0.94
NDEL1-216ENST00000583066 HTRA3P83110 453 aa9.16□□□□□ -0.94
NDEL1-216ENST00000583066 GOLGA2Q08379 1002 aa9.16□□□□□ -0.94
NDEL1-216ENST00000583066 TMEM132EQ6IEE7 984 aa9.16□□□□□ -0.94
NDEL1-216ENST00000583066 TCP11L2Q8N4U5 519 aa9.16□□□□□ -0.94
NDEL1-216ENST00000583066 MPHOSPH9Q99550 1183 aa9.16□□□□□ -0.94
NDEL1-216ENST00000583066 ABCC11Q96J66 1382 aa9.15□□□□□ -0.94
NDEL1-216ENST00000583066 YTHDC1Q96MU7 727 aaKnown RBP9.15□□□□□ -0.94
NDEL1-216ENST00000583066 ZC3H6P61129 1189 aaKnown RBP9.14□□□□□ -0.95
NDEL1-216ENST00000583066 ZNF827Q17R98 1081 aa9.14□□□□□ -0.95
NDEL1-216ENST00000583066 ADGRF5Q8IZF2 1346 aa9.13□□□□□ -0.95
NDEL1-216ENST00000583066 ANP32CO43423 234 aa9.13□□□□□ -0.95
NDEL1-216ENST00000583066 JMYQ8N9B5 988 aa9.13□□□□□ -0.95
NDEL1-216ENST00000583066 OCEL1Q9H607 264 aa9.13□□□□□ -0.95
NDEL1-216ENST00000583066 QSER1Q2KHR3 1735 aa9.13□□□□□ -0.95
NDEL1-216ENST00000583066 YTHDC2Q9H6S0 1430 aaKnown RBP9.13□□□□□ -0.95
NDEL1-216ENST00000583066 ARHGEF28Q8N1W1 1705 aaKnown RBP9.12□□□□□ -0.95
NDEL1-216ENST00000583066 SEC24BO95487 1268 aa9.12□□□□□ -0.95
NDEL1-216ENST00000583066 EVA1CP58658 441 aa9.12□□□□□ -0.95
NDEL1-216ENST00000583066 PDCD7Q8N8D1 485 aaKnown RBP9.12□□□□□ -0.95
NDEL1-216ENST00000583066 WWC3Q9ULE0 1092 aa9.12□□□□□ -0.95
NDEL1-216ENST00000583066 ANKARQ7Z5J8 1434 aa9.12□□□□□ -0.95
NDEL1-216ENST00000583066 GPRASP1Q5JY77 1395 aa9.12□□□□□ -0.95
NDEL1-216ENST00000583066 AATKQ6ZMQ8 1374 aa9.12□□□□□ -0.95
NDEL1-216ENST00000583066 ANKRD30BQ9BXX2 1392 aa9.12□□□□□ -0.95
NDEL1-216ENST00000583066 PRR36Q9H6K5 1346 aa9.11□□□□□ -0.95
NDEL1-216ENST00000583066 COL5A2P05997 1499 aaPredicted RBP9.11□□□□□ -0.95
NDEL1-216ENST00000583066 SOX12O15370 315 aa9.11□□□□□ -0.95
NDEL1-216ENST00000583066 GRIN3BO60391 1043 aa9.11□□□□□ -0.95
NDEL1-216ENST00000583066 SAFB2Q14151 953 aaKnown RBP eCLIP9.11□□□□□ -0.95
NDEL1-216ENST00000583066 NUTM2GQ5VZR2 741 aa9.11□□□□□ -0.95
NDEL1-216ENST00000583066 MARCH10Q8NA82 808 aaPredicted RBP9.11□□□□□ -0.95
NDEL1-216ENST00000583066 KLRG1Q96E93 195 aa9.11□□□□□ -0.95
NDEL1-216ENST00000583066 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.11□□□□□ -0.951e-14■□□□□ 8.8
NDEL1-216ENST00000583066 TNS2Q63HR2 1409 aa9.11□□□□□ -0.95
NDEL1-216ENST00000583066 NHSQ6T4R5 1651 aa9.1□□□□□ -0.95
NDEL1-216ENST00000583066 POTEJP0CG39 1038 aa9.1□□□□□ -0.95
NDEL1-216ENST00000583066 PLCG2P16885 1265 aa9.1□□□□□ -0.95
NDEL1-216ENST00000583066 EIF4G2P78344 907 aaKnown RBP eCLIP9.1□□□□□ -0.95
NDEL1-216ENST00000583066 DDX10Q13206 875 aaKnown RBP9.1□□□□□ -0.95
NDEL1-216ENST00000583066 CDAN1Q8IWY9 1227 aa9.1□□□□□ -0.95
NDEL1-216ENST00000583066 RPGRIP1LQ68CZ1 1315 aa9.09□□□□□ -0.95
NDEL1-216ENST00000583066 C11orf95C9JLR9 678 aaPredicted RBP9.09□□□□□ -0.95
NDEL1-216ENST00000583066 MFRPQ9BY79 579 aa9.09□□□□□ -0.95
NDEL1-216ENST00000583066 BTAF1O14981 1849 aa9.09□□□□□ -0.95
NDEL1-216ENST00000583066 BCL9O00512 1426 aa9.08□□□□□ -0.96
NDEL1-216ENST00000583066 FBXO22Q8NEZ5 403 aa9.08□□□□□ -0.96
NDEL1-216ENST00000583066 MS4A4AQ96JQ5 239 aa9.08□□□□□ -0.96
NDEL1-216ENST00000583066 THRAP3Q9Y2W1 955 aaKnown RBP9.08□□□□□ -0.96
NDEL1-216ENST00000583066 TULP4Q9NRJ4 1543 aa9.08□□□□□ -0.96
NDEL1-216ENST00000583066 PIK3C2GO75747 1445 aa9.07□□□□□ -0.96
NDEL1-216ENST00000583066 CRB1P82279 1406 aa9.07□□□□□ -0.96
NDEL1-216ENST00000583066 POLD1P28340 1107 aa9.07□□□□□ -0.96
NDEL1-216ENST00000583066 NKX1-1Q15270 411 aaPredicted RBP9.07□□□□□ -0.96
NDEL1-216ENST00000583066 DDB1Q16531 1140 aa9.07□□□□□ -0.96
NDEL1-216ENST00000583066 DPY19L2Q6NUT2 758 aa9.07□□□□□ -0.96
NDEL1-216ENST00000583066 LCE2DQ5TA82 110 aaPredicted RBP9.06□□□□□ -0.96
NDEL1-216ENST00000583066 L3MBTL2Q969R5 705 aa9.06□□□□□ -0.96
NDEL1-216ENST00000583066 PRAM1Q96QH2 718 aa9.06□□□□□ -0.96
NDEL1-216ENST00000583066 LRRC4BQ9NT99 713 aa9.06□□□□□ -0.96
NDEL1-216ENST00000583066 PNPLA7Q6ZV29 1317 aa9.05□□□□□ -0.96
NDEL1-216ENST00000583066 CPDO75976 1380 aa9.05□□□□□ -0.96
NDEL1-216ENST00000583066 HIRIP3Q9BW71 556 aaPredicted RBP9.05□□□□□ -0.96
NDEL1-216ENST00000583066 ITSN1Q15811 1721 aa9.05□□□□□ -0.96
NDEL1-216ENST00000583066 TOMM70O94826 608 aa9.04□□□□□ -0.96
NDEL1-216ENST00000583066 HSPA1AP0DMV8 641 aaKnown RBP9.04□□□□□ -0.96
NDEL1-216ENST00000583066 HSPA1BP0DMV9 641 aaKnown RBP9.04□□□□□ -0.96
NDEL1-216ENST00000583066 NLRP6P59044 892 aa9.04□□□□□ -0.96
NDEL1-216ENST00000583066 FAM161AQ3B820 660 aa9.04□□□□□ -0.96
NDEL1-216ENST00000583066 HSPA5P11021 654 aaKnown RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms