RNA–Protein interactions for RNA: ENST00000582877.1

CACNB1-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 4

Gene CACNB1, Length 599 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-211ENST00000582877 NBPF14Q5TI25 921 aa13.76□□□□□ -0.21
CACNB1-211ENST00000582877 ANO8Q9HCE9 1232 aaPredicted RBP13.76□□□□□ -0.21
CACNB1-211ENST00000582877 SRCAPQ6ZRS2 3230 aa13.76□□□□□ -0.21
CACNB1-211ENST00000582877 TOGARAM1Q9Y4F4 1720 aa13.76□□□□□ -0.21
CACNB1-211ENST00000582877 DDX54Q8TDD1 881 aaKnown RBP13.75□□□□□ -0.21
CACNB1-211ENST00000582877 LY75O60449 1722 aa13.74□□□□□ -0.21
CACNB1-211ENST00000582877 PPM1GO15355 546 aaPredicted RBP13.74□□□□□ -0.21
CACNB1-211ENST00000582877 PROM2Q8N271 834 aa13.74□□□□□ -0.21
CACNB1-211ENST00000582877 PANK3Q9H999 370 aa13.74□□□□□ -0.21
CACNB1-211ENST00000582877 TUBGCP6Q96RT7 1819 aa13.74□□□□□ -0.21
CACNB1-211ENST00000582877 NCAPD2Q15021 1401 aa13.73□□□□□ -0.21
CACNB1-211ENST00000582877 TNNT2P45379 298 aaPredicted RBP13.73□□□□□ -0.21
CACNB1-211ENST00000582877 TXNRD1Q16881 649 aa13.73□□□□□ -0.21
CACNB1-211ENST00000582877 KIF7Q2M1P5 1343 aa13.72□□□□□ -0.21
CACNB1-211ENST00000582877 ITGB4P16144 1822 aa13.72□□□□□ -0.21
CACNB1-211ENST00000582877 ZCRB1Q8TBF4 217 aaKnown RBP13.72□□□□□ -0.21
CACNB1-211ENST00000582877 RAPGEF4Q8WZA2 1011 aa13.72□□□□□ -0.21
CACNB1-211ENST00000582877 NSD2O96028 1365 aa13.71□□□□□ -0.21
CACNB1-211ENST00000582877 TATP17735 454 aaPredicted RBP13.71□□□□□ -0.21
CACNB1-211ENST00000582877 POLKQ9UBT6 870 aa13.71□□□□□ -0.21
CACNB1-211ENST00000582877 WASHC2AQ641Q2 1341 aa13.7□□□□□ -0.22
CACNB1-211ENST00000582877 QSER1Q2KHR3 1735 aa13.7□□□□□ -0.22
CACNB1-211ENST00000582877 SYTL4Q96C24 671 aaPredicted RBP13.69□□□□□ -0.22
CACNB1-211ENST00000582877 PCDH11XQ9BZA7 1347 aa13.68□□□□□ -0.22
CACNB1-211ENST00000582877 PCDH11YQ9BZA8 1340 aa13.68□□□□□ -0.22
CACNB1-211ENST00000582877 PDGFDQ9GZP0 370 aaPredicted RBP13.68□□□□□ -0.22
CACNB1-211ENST00000582877 STK32BQ9NY57 414 aa13.68□□□□□ -0.22
CACNB1-211ENST00000582877 C5P01031 1676 aa13.67□□□□□ -0.22
CACNB1-211ENST00000582877 PRIM1P49642 420 aaKnown RBP13.67□□□□□ -0.22
CACNB1-211ENST00000582877 EIF4A2Q14240 407 aaKnown RBP13.67□□□□□ -0.22
CACNB1-211ENST00000582877 TAF1LQ8IZX4 1826 aa13.67□□□□□ -0.22
CACNB1-211ENST00000582877 SLC15A2Q16348 729 aa13.66□□□□□ -0.22
CACNB1-211ENST00000582877 EYA1Q99502 592 aa13.66□□□□□ -0.22
CACNB1-211ENST00000582877 LRRC4BQ9NT99 713 aa13.66□□□□□ -0.22
CACNB1-211ENST00000582877 CYP27B1O15528 508 aa13.65□□□□□ -0.22
CACNB1-211ENST00000582877 ZNF827Q17R98 1081 aa13.65□□□□□ -0.22
CACNB1-211ENST00000582877 MORC1Q86VD1 984 aa13.65□□□□□ -0.22
CACNB1-211ENST00000582877 KNSTRNQ9Y448 316 aa13.65□□□□□ -0.22
CACNB1-211ENST00000582877 SPON1Q9HCB6 807 aa13.64□□□□□ -0.23
CACNB1-211ENST00000582877 ZBTB7AO95365 584 aa13.63□□□□□ -0.23
CACNB1-211ENST00000582877 KCNQ4P56696 695 aa13.63□□□□□ -0.23
CACNB1-211ENST00000582877 AMER1Q5JTC6 1135 aaPredicted RBP13.63□□□□□ -0.23
CACNB1-211ENST00000582877 IGSF1Q8N6C5 1336 aa13.63□□□□□ -0.23
CACNB1-211ENST00000582877 SLC27A3Q5K4L6 730 aa13.61□□□□□ -0.23
CACNB1-211ENST00000582877 PPP1R1BQ9UD71 204 aaPredicted RBP13.61□□□□□ -0.23
CACNB1-211ENST00000582877 SPG7Q9UQ90 795 aa13.61□□□□□ -0.23
CACNB1-211ENST00000582877 VIRMAQ69YN4 1812 aaKnown RBP13.61□□□□□ -0.23
CACNB1-211ENST00000582877 COL24A1Q17RW2 1714 aa13.61□□□□□ -0.23
CACNB1-211ENST00000582877 PALLDQ8WX93 1383 aa13.6□□□□□ -0.23
CACNB1-211ENST00000582877 AKT1S1Q96B36 256 aa13.6□□□□□ -0.23
CACNB1-211ENST00000582877 CCNL1Q9UK58 526 aaPredicted RBP13.6□□□□□ -0.23
CACNB1-211ENST00000582877 ATF5Q9Y2D1 282 aaPredicted RBP13.6□□□□□ -0.23
CACNB1-211ENST00000582877 C4BP0C0L5 1744 aa13.59□□□□□ -0.23
CACNB1-211ENST00000582877 MPRIPQ6WCQ1 1025 aa13.59□□□□□ -0.23
CACNB1-211ENST00000582877 PLEKHG2Q9H7P9 1386 aa13.58□□□□□ -0.23
CACNB1-211ENST00000582877 PER1O15534 1290 aaPredicted RBP13.58□□□□□ -0.24
CACNB1-211ENST00000582877 PHKG2P15735 406 aa13.58□□□□□ -0.24
CACNB1-211ENST00000582877 PTGER2P43116 358 aa13.58□□□□□ -0.24
CACNB1-211ENST00000582877 CC2D1BQ5T0F9 858 aaKnown RBP13.58□□□□□ -0.24
CACNB1-211ENST00000582877 AEBP1Q8IUX7 1158 aa13.58□□□□□ -0.24
CACNB1-211ENST00000582877 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.58□□□□□ -0.24
CACNB1-211ENST00000582877 PNPLA7Q6ZV29 1317 aa13.58□□□□□ -0.24
CACNB1-211ENST00000582877 UBR3Q6ZT12 1888 aa13.57□□□□□ -0.24
CACNB1-211ENST00000582877 CNGB1Q14028 1251 aaPredicted RBP13.57□□□□□ -0.24
CACNB1-211ENST00000582877 NKX1-1Q15270 411 aaPredicted RBP13.57□□□□□ -0.24
CACNB1-211ENST00000582877 MTFR1LQ9H019 292 aa13.57□□□□□ -0.24
CACNB1-211ENST00000582877 SCN11AQ9UI33 1791 aa13.57□□□□□ -0.24
CACNB1-211ENST00000582877 IFNL2Q8IZJ0 200 aa13.56□□□□□ -0.24
CACNB1-211ENST00000582877 PIGBQ92521 554 aa13.56□□□□□ -0.24
CACNB1-211ENST00000582877 KDM6AO15550 1401 aaPredicted RBP13.56□□□□□ -0.24
CACNB1-211ENST00000582877 COL3A1P02461 1466 aaPredicted RBP13.55□□□□□ -0.24
CACNB1-211ENST00000582877 IL13P35225 146 aa13.55□□□□□ -0.24
CACNB1-211ENST00000582877 SGIP1Q9BQI5 828 aa13.55□□□□□ -0.24
CACNB1-211ENST00000582877 TFCP2L1Q9NZI6 479 aa13.55□□□□□ -0.24
CACNB1-211ENST00000582877 KDRP35968 1356 aa13.55□□□□□ -0.24
CACNB1-211ENST00000582877 COL5A3P25940 1745 aaPredicted RBP13.54□□□□□ -0.24
CACNB1-211ENST00000582877 MTHFSP49914 203 aa13.54□□□□□ -0.24
CACNB1-211ENST00000582877 SULT6B1Q6IMI4 303 aa13.54□□□□□ -0.24
CACNB1-211ENST00000582877 TMOD3Q9NYL9 352 aa13.54□□□□□ -0.24
CACNB1-211ENST00000582877 NPC1L1Q9UHC9 1359 aa13.54□□□□□ -0.24
CACNB1-211ENST00000582877 ZNF530Q6P9A1 599 aaPredicted RBP13.53□□□□□ -0.24
CACNB1-211ENST00000582877 SMARCC1Q92922 1105 aaPredicted RBP13.53□□□□□ -0.24
CACNB1-211ENST00000582877 ZNF831Q5JPB2 1677 aa13.53□□□□□ -0.24
CACNB1-211ENST00000582877 PLEKHO1Q53GL0 409 aaPredicted RBP13.52□□□□□ -0.25
CACNB1-211ENST00000582877 FHDC1Q9C0D6 1143 aaPredicted RBP13.51□□□□□ -0.25
CACNB1-211ENST00000582877 ASAP1Q9ULH1 1129 aa13.51□□□□□ -0.25
CACNB1-211ENST00000582877 TJP1Q07157 1748 aa13.5□□□□□ -0.25
CACNB1-211ENST00000582877 MSH5O43196 834 aa13.5□□□□□ -0.25
CACNB1-211ENST00000582877 HMOX1P09601 288 aa13.5□□□□□ -0.25
CACNB1-211ENST00000582877 AMOTQ4VCS5 1084 aa13.5□□□□□ -0.25
CACNB1-211ENST00000582877 ADAMTS7Q9UKP4 1686 aa13.5□□□□□ -0.25
CACNB1-211ENST00000582877 LOC102724428A0A0B4J2F2 783 aa13.49□□□□□ -0.25
CACNB1-211ENST00000582877 HSP90AB1P08238 724 aaKnown RBP13.49□□□□□ -0.25
CACNB1-211ENST00000582877 SIK1P57059 783 aa13.49□□□□□ -0.25
CACNB1-211ENST00000582877 C1orf141Q5JVX7 400 aa13.49□□□□□ -0.25
CACNB1-211ENST00000582877 COL23A1Q86Y22 540 aaPredicted RBP13.49□□□□□ -0.25
CACNB1-211ENST00000582877 LINC00116Q8NCU8 138 aa13.49□□□□□ -0.25
CACNB1-211ENST00000582877 SLC16A10Q8TF71 515 aa13.49□□□□□ -0.25
CACNB1-211ENST00000582877 DCAF5Q96JK2 942 aa13.49□□□□□ -0.25
CACNB1-211ENST00000582877 ARXQ96QS3 562 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms