RNA–Protein interactions for RNA: ENST00000581705.5

SNX11-209, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 1,426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-209ENST00000581705 KIF20BQ96Q89 1820 aa27.65■■■□□ 2.02
SNX11-209ENST00000581705 NHSQ6T4R5 1651 aa27.64■■■□□ 2.01
SNX11-209ENST00000581705 ACSBG1Q96GR2 724 aa27.63■■■□□ 2.01
SNX11-209ENST00000581705 ANO8Q9HCE9 1232 aaPredicted RBP27.62■■■□□ 2.01
SNX11-209ENST00000581705 TXNRD1Q16881 649 aa27.61■■■□□ 2.01
SNX11-209ENST00000581705 MRS2Q9HD23 443 aa27.6■■■□□ 2.01
SNX11-209ENST00000581705 MORC1Q86VD1 984 aa27.59■■■□□ 2.01
SNX11-209ENST00000581705 KIF24Q5T7B8 1368 aa27.59■■■□□ 2.01
SNX11-209ENST00000581705 CNGB1Q14028 1251 aaPredicted RBP27.58■■■□□ 2.01
SNX11-209ENST00000581705 DDX54Q8TDD1 881 aaKnown RBP27.58■■■□□ 2.01
SNX11-209ENST00000581705 RGPD2P0DJD1 1756 aa27.58■■■□□ 2.01
SNX11-209ENST00000581705 PPP2R1AP30153 589 aa27.58■■■□□ 2
SNX11-209ENST00000581705 NBPF6Q5VWK0 638 aa27.58■■■□□ 2
SNX11-209ENST00000581705 NBPF4Q96M43 638 aa27.58■■■□□ 2
SNX11-209ENST00000581705 INSRP06213 1382 aa27.57■■■□□ 2
SNX11-209ENST00000581705 SMG6Q86US8 1419 aaKnown RBP27.56■■■□□ 2
SNX11-209ENST00000581705 FLT4P35916 1363 aa27.56■■■□□ 2
SNX11-209ENST00000581705 HSP90AB2PQ58FF8 381 aa27.56■■■□□ 2
SNX11-209ENST00000581705 MEGF6O75095 1541 aa27.55■■■□□ 2
SNX11-209ENST00000581705 ZCRB1Q8TBF4 217 aaKnown RBP27.54■■■□□ 2
SNX11-209ENST00000581705 SPON1Q9HCB6 807 aa27.54■■■□□ 2
SNX11-209ENST00000581705 BTAF1O14981 1849 aa27.53■■■□□ 2
SNX11-209ENST00000581705 KAT6BQ8WYB5 2073 aa27.52■■■□□ 2
SNX11-209ENST00000581705 CCDC184Q52MB2 194 aa27.51■■□□□ 1.99
SNX11-209ENST00000581705 USHBP1Q8N6Y0 703 aa27.51■■□□□ 1.99
SNX11-209ENST00000581705 STK32BQ9NY57 414 aa27.51■■□□□ 1.99
SNX11-209ENST00000581705 SLC15A2Q16348 729 aa27.5■■□□□ 1.99
SNX11-209ENST00000581705 EMILIN1Q9Y6C2 1016 aa27.5■■□□□ 1.99
SNX11-209ENST00000581705 CASZ1Q86V15 1759 aa27.5■■□□□ 1.99
SNX11-209ENST00000581705 SHANK3Q9BYB0 1731 aa27.49■■□□□ 1.99
SNX11-209ENST00000581705 RAPGEF4Q8WZA2 1011 aa27.49■■□□□ 1.99
SNX11-209ENST00000581705 PDGFDQ9GZP0 370 aaPredicted RBP27.49■■□□□ 1.99
SNX11-209ENST00000581705 PNISRQ8TF01 805 aaKnown RBP27.47■■□□□ 1.99
SNX11-209ENST00000581705 TATP17735 454 aaPredicted RBP27.45■■□□□ 1.98
SNX11-209ENST00000581705 PRIM1P49642 420 aaKnown RBP27.45■■□□□ 1.98
SNX11-209ENST00000581705 PAPPAQ13219 1627 aa27.44■■□□□ 1.98
SNX11-209ENST00000581705 LRRC4BQ9NT99 713 aa27.44■■□□□ 1.98
SNX11-209ENST00000581705 PPM1GO15355 546 aaPredicted RBP27.43■■□□□ 1.98
SNX11-209ENST00000581705 SYTL4Q96C24 671 aaPredicted RBP27.43■■□□□ 1.98
SNX11-209ENST00000581705 PPP1R1BQ9UD71 204 aaPredicted RBP27.43■■□□□ 1.98
SNX11-209ENST00000581705 DOT1LQ8TEK3 1739 aa27.43■■□□□ 1.98
SNX11-209ENST00000581705 ZBTB7AO95365 584 aa27.41■■□□□ 1.98
SNX11-209ENST00000581705 SLC27A3Q5K4L6 730 aa27.41■■□□□ 1.98
SNX11-209ENST00000581705 POLKQ9UBT6 870 aa27.41■■□□□ 1.98
SNX11-209ENST00000581705 NCAPD2Q15021 1401 aa27.4■■□□□ 1.98
SNX11-209ENST00000581705 CFAP53Q96M91 514 aa27.39■■□□□ 1.97
SNX11-209ENST00000581705 PCDH11XQ9BZA7 1347 aa27.39■■□□□ 1.97
SNX11-209ENST00000581705 PCDH11YQ9BZA8 1340 aa27.39■■□□□ 1.97
SNX11-209ENST00000581705 MAP2P11137 1827 aaKnown RBP27.39■■□□□ 1.97
SNX11-209ENST00000581705 PTGER2P43116 358 aa27.38■■□□□ 1.97
SNX11-209ENST00000581705 MTHFSP49914 203 aa27.37■■□□□ 1.97
SNX11-209ENST00000581705 ZNF827Q17R98 1081 aa27.37■■□□□ 1.97
SNX11-209ENST00000581705 MTFR1LQ9H019 292 aa27.36■■□□□ 1.97
SNX11-209ENST00000581705 TNNT2P45379 298 aaPredicted RBP27.35■■□□□ 1.97
SNX11-209ENST00000581705 FAM9BQ8IZU0 186 aa27.35■■□□□ 1.97
SNX11-209ENST00000581705 AKT1S1Q96B36 256 aa27.35■■□□□ 1.97
SNX11-209ENST00000581705 ATF5Q9Y2D1 282 aaPredicted RBP27.35■■□□□ 1.97
SNX11-209ENST00000581705 CYP27B1O15528 508 aa27.34■■□□□ 1.97
SNX11-209ENST00000581705 EYA1Q99502 592 aa27.34■■□□□ 1.97
SNX11-209ENST00000581705 LY75O60449 1722 aa27.33■■□□□ 1.96
SNX11-209ENST00000581705 YTHDC1Q96MU7 727 aaKnown RBP27.32■■□□□ 1.96
SNX11-209ENST00000581705 PKD1L3Q7Z443 1732 aa27.31■■□□□ 1.96
SNX11-209ENST00000581705 KCNQ4P56696 695 aa27.31■■□□□ 1.96
SNX11-209ENST00000581705 SGIP1Q9BQI5 828 aa27.31■■□□□ 1.96
SNX11-209ENST00000581705 WDR43Q15061 677 aaKnown RBP eCLIP27.3■■□□□ 1.96
SNX11-209ENST00000581705 EIF4A2Q14240 407 aaKnown RBP27.29■■□□□ 1.96
SNX11-209ENST00000581705 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.29■■□□□ 1.96
SNX11-209ENST00000581705 CCNL1Q9UK58 526 aaPredicted RBP27.28■■□□□ 1.96
SNX11-209ENST00000581705 SPG7Q9UQ90 795 aa27.28■■□□□ 1.96
SNX11-209ENST00000581705 COL3A1P02461 1466 aaPredicted RBP27.28■■□□□ 1.96
SNX11-209ENST00000581705 NKX1-1Q15270 411 aaPredicted RBP27.27■■□□□ 1.96
SNX11-209ENST00000581705 CENPBP07199 599 aaPredicted RBP27.25■■□□□ 1.95
SNX11-209ENST00000581705 QSER1Q2KHR3 1735 aa27.25■■□□□ 1.95
SNX11-209ENST00000581705 PNPLA7Q6ZV29 1317 aa27.25■■□□□ 1.95
SNX11-209ENST00000581705 MPRIPQ6WCQ1 1025 aa27.24■■□□□ 1.95
SNX11-209ENST00000581705 SLC16A10Q8TF71 515 aa27.24■■□□□ 1.95
SNX11-209ENST00000581705 TFCP2L1Q9NZI6 479 aa27.24■■□□□ 1.95
SNX11-209ENST00000581705 NUDCQ9Y266 331 aa27.24■■□□□ 1.95
SNX11-209ENST00000581705 TOGARAM1Q9Y4F4 1720 aa27.24■■□□□ 1.95
SNX11-209ENST00000581705 IGSF1Q8N6C5 1336 aa27.22■■□□□ 1.95
SNX11-209ENST00000581705 PLEKHG2Q9H7P9 1386 aa27.22■■□□□ 1.95
SNX11-209ENST00000581705 PALLDQ8WX93 1383 aa27.21■■□□□ 1.95
SNX11-209ENST00000581705 FHDC1Q9C0D6 1143 aaPredicted RBP27.21■■□□□ 1.95
SNX11-209ENST00000581705 DCAF8L1A6NGE4 600 aa27.2■■□□□ 1.94
SNX11-209ENST00000581705 HNRNPUQ00839 825 aaKnown RBP eCLIP27.2■■□□□ 1.94
SNX11-209ENST00000581705 ARXQ96QS3 562 aa27.2■■□□□ 1.94
SNX11-209ENST00000581705 ADAMTS8Q9UP79 889 aa27.2■■□□□ 1.94
SNX11-209ENST00000581705 ITGB4P16144 1822 aa27.2■■□□□ 1.94
SNX11-209ENST00000581705 TUBGCP6Q96RT7 1819 aa27.19■■□□□ 1.94
SNX11-209ENST00000581705 DIAPH1O60610 1272 aaKnown RBP27.19■■□□□ 1.94
SNX11-209ENST00000581705 PIGBQ92521 554 aa27.19■■□□□ 1.94
SNX11-209ENST00000581705 SYT17Q9BSW7 474 aa27.19■■□□□ 1.94
SNX11-209ENST00000581705 PHKG2P15735 406 aa27.18■■□□□ 1.94
SNX11-209ENST00000581705 IFNL2Q8IZJ0 200 aa27.18■■□□□ 1.94
SNX11-209ENST00000581705 SMARCC1Q92922 1105 aaPredicted RBP27.18■■□□□ 1.94
SNX11-209ENST00000581705 HMGB2P26583 209 aaKnown RBP27.17■■□□□ 1.94
SNX11-209ENST00000581705 ZBED9Q6R2W3 1325 aa27.16■■□□□ 1.94
SNX11-209ENST00000581705 COL24A1Q17RW2 1714 aa27.14■■□□□ 1.94
SNX11-209ENST00000581705 C5P01031 1676 aa27.14■■□□□ 1.94
SNX11-209ENST00000581705 MAP3K5Q99683 1374 aa27.14■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms