RNA–Protein interactions for RNA: ENST00000581335.1

NUP85-217, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-217ENST00000581335 USP31Q70CQ4 1352 aa12.43□□□□□ -0.42
NUP85-217ENST00000581335 ABCC6O95255 1503 aa12.42□□□□□ -0.42
NUP85-217ENST00000581335 CD163L1Q9NR16 1453 aa12.42□□□□□ -0.42
NUP85-217ENST00000581335 TMC1Q8TDI8 760 aa12.42□□□□□ -0.42
NUP85-217ENST00000581335 BCL11BQ9C0K0 894 aaPredicted RBP12.42□□□□□ -0.42
NUP85-217ENST00000581335 TONSLQ96HA7 1378 aa12.42□□□□□ -0.42
NUP85-217ENST00000581335 LTN1O94822 1766 aa12.41□□□□□ -0.42
NUP85-217ENST00000581335 EXOC5O00471 708 aa12.41□□□□□ -0.42
NUP85-217ENST00000581335 BCL9O00512 1426 aa12.41□□□□□ -0.42
NUP85-217ENST00000581335 HDGFL2Q7Z4V5 671 aaPredicted RBP12.41□□□□□ -0.42
NUP85-217ENST00000581335 PUS7Q96PZ0 661 aaKnown RBP12.41□□□□□ -0.42
NUP85-217ENST00000581335 SLC12A5Q9H2X9 1139 aa12.41□□□□□ -0.42
NUP85-217ENST00000581335 CCDC7Q96M83 1385 aa12.41□□□□□ -0.42
NUP85-217ENST00000581335 PTF1AQ7RTS3 328 aa12.4□□□□□ -0.42
NUP85-217ENST00000581335 NME9Q86XW9 330 aa12.4□□□□□ -0.42
NUP85-217ENST00000581335 RBM42Q9BTD8 480 aaKnown RBP12.39□□□□□ -0.43
NUP85-217ENST00000581335 EDC4Q6P2E9 1401 aaKnown RBP12.38□□□□□ -0.43
NUP85-217ENST00000581335 SGIP1Q9BQI5 828 aa12.38□□□□□ -0.43
NUP85-217ENST00000581335 SPON1Q9HCB6 807 aa12.38□□□□□ -0.43
NUP85-217ENST00000581335 TERF2IPQ9NYB0 399 aa12.38□□□□□ -0.43
NUP85-217ENST00000581335 ERBB3P21860 1342 aa12.37□□□□□ -0.43
NUP85-217ENST00000581335 KCNQ2O43526 872 aa12.37□□□□□ -0.43
NUP85-217ENST00000581335 RASEFQ8IZ41 740 aa12.37□□□□□ -0.43
NUP85-217ENST00000581335 A0A1W2PP64 1363 aa12.36□□□□□ -0.43
NUP85-217ENST00000581335 REM2Q8IYK8 340 aaPredicted RBP12.36□□□□□ -0.43
NUP85-217ENST00000581335 ANKRD24Q8TF21 1146 aa12.36□□□□□ -0.43
NUP85-217ENST00000581335 FAM212AQ96EL1 285 aa12.36□□□□□ -0.43
NUP85-217ENST00000581335 NLRP2Q9NX02 1062 aa12.36□□□□□ -0.43
NUP85-217ENST00000581335 TNS2Q63HR2 1409 aa12.36□□□□□ -0.43
NUP85-217ENST00000581335 ST20-MTHFSA0A0A6YYL1 179 aa12.35□□□□□ -0.43
NUP85-217ENST00000581335 PRR29P0C7W0 189 aa12.35□□□□□ -0.43
NUP85-217ENST00000581335 IL2RBP14784 551 aa12.35□□□□□ -0.43
NUP85-217ENST00000581335 TESK2Q96S53 571 aa12.35□□□□□ -0.43
NUP85-217ENST00000581335 ANO8Q9HCE9 1232 aaPredicted RBP12.35□□□□□ -0.43
NUP85-217ENST00000581335 CASZ1Q86V15 1759 aa12.35□□□□□ -0.43
NUP85-217ENST00000581335 TXNRD1Q16881 649 aa12.34□□□□□ -0.43
NUP85-217ENST00000581335 PPP1R1BQ9UD71 204 aaPredicted RBP12.34□□□□□ -0.43
NUP85-217ENST00000581335 NHSQ6T4R5 1651 aa12.34□□□□□ -0.43
NUP85-217ENST00000581335 NINLQ9Y2I6 1382 aa12.33□□□□□ -0.44
NUP85-217ENST00000581335 IP6K1Q92551 441 aa12.33□□□□□ -0.44
NUP85-217ENST00000581335 ACSBG1Q96GR2 724 aa12.32□□□□□ -0.44
NUP85-217ENST00000581335 STK32BQ9NY57 414 aa12.32□□□□□ -0.44
NUP85-217ENST00000581335 CLEC11AQ9Y240 323 aa12.32□□□□□ -0.44
NUP85-217ENST00000581335 FAM208AQ9UK61 1670 aaKnown RBP12.32□□□□□ -0.44
NUP85-217ENST00000581335 STK25O00506 426 aa12.31□□□□□ -0.44
NUP85-217ENST00000581335 SLC15A2Q16348 729 aa12.31□□□□□ -0.44
NUP85-217ENST00000581335 COG3Q96JB2 828 aa12.31□□□□□ -0.44
NUP85-217ENST00000581335 PDGFDQ9GZP0 370 aaPredicted RBP12.31□□□□□ -0.44
NUP85-217ENST00000581335 BTAF1O14981 1849 aa12.3□□□□□ -0.44
NUP85-217ENST00000581335 TRIM26Q12899 539 aaPredicted RBP12.3□□□□□ -0.44
NUP85-217ENST00000581335 ZBTB7AO95365 584 aa12.29□□□□□ -0.44
NUP85-217ENST00000581335 LTV1Q96GA3 475 aaPredicted RBP12.29□□□□□ -0.44
NUP85-217ENST00000581335 KAT6BQ8WYB5 2073 aa12.29□□□□□ -0.44
NUP85-217ENST00000581335 ANKRD36BQ8N2N9 1353 aa12.29□□□□□ -0.44
NUP85-217ENST00000581335 RGPD2P0DJD1 1756 aa12.28□□□□□ -0.44
NUP85-217ENST00000581335 FBLN1P23142 703 aa12.28□□□□□ -0.44
NUP85-217ENST00000581335 HOXC9P31274 260 aa12.28□□□□□ -0.44
NUP85-217ENST00000581335 AMPHP49418 695 aa12.28□□□□□ -0.44
NUP85-217ENST00000581335 TMF1P82094 1093 aa12.28□□□□□ -0.44
NUP85-217ENST00000581335 MAP3K19Q56UN5 1328 aa12.28□□□□□ -0.44
NUP85-217ENST00000581335 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.27□□□□□ -0.45
NUP85-217ENST00000581335 PTGER2P43116 358 aa12.27□□□□□ -0.45
NUP85-217ENST00000581335 NBR1Q14596 966 aa12.27□□□□□ -0.45
NUP85-217ENST00000581335 DDX54Q8TDD1 881 aaKnown RBP12.27□□□□□ -0.45
NUP85-217ENST00000581335 ZFP91Q96JP5 570 aaPredicted RBP12.27□□□□□ -0.45
NUP85-217ENST00000581335 PAPPAQ13219 1627 aa12.26□□□□□ -0.45
NUP85-217ENST00000581335 MYOM1P52179 1685 aa12.26□□□□□ -0.45
NUP85-217ENST00000581335 FYB1O15117 783 aa12.26□□□□□ -0.45
NUP85-217ENST00000581335 YY1P25490 414 aa12.25□□□□□ -0.45
NUP85-217ENST00000581335 MTFR1LQ9H019 292 aa12.25□□□□□ -0.45
NUP85-217ENST00000581335 USP47Q96K76 1375 aa12.25□□□□□ -0.45
NUP85-217ENST00000581335 ZCRB1Q8TBF4 217 aaKnown RBP12.24□□□□□ -0.45
NUP85-217ENST00000581335 SHANK3Q9BYB0 1731 aa12.24□□□□□ -0.45
NUP85-217ENST00000581335 GGNBP2Q9H3C7 697 aa12.24□□□□□ -0.45
NUP85-217ENST00000581335 LRRC4BQ9NT99 713 aa12.24□□□□□ -0.45
NUP85-217ENST00000581335 KIF20BQ96Q89 1820 aa12.23□□□□□ -0.45
NUP85-217ENST00000581335 RTL1A6NKG5 1358 aa12.23□□□□□ -0.45
NUP85-217ENST00000581335 RRS1Q15050 365 aaKnown RBP12.23□□□□□ -0.45
NUP85-217ENST00000581335 CDCA8Q53HL2 280 aa12.23□□□□□ -0.45
NUP85-217ENST00000581335 QSER1Q2KHR3 1735 aa12.23□□□□□ -0.45
NUP85-217ENST00000581335 DOT1LQ8TEK3 1739 aa12.23□□□□□ -0.45
NUP85-217ENST00000581335 PRIM1P49642 420 aaKnown RBP12.22□□□□□ -0.45
NUP85-217ENST00000581335 ZNF827Q17R98 1081 aa12.22□□□□□ -0.45
NUP85-217ENST00000581335 SLC27A3Q5K4L6 730 aa12.22□□□□□ -0.45
NUP85-217ENST00000581335 NBPF6Q5VWK0 638 aa12.22□□□□□ -0.45
NUP85-217ENST00000581335 NBPF4Q96M43 638 aa12.22□□□□□ -0.45
NUP85-217ENST00000581335 LY75O60449 1722 aa12.21□□□□□ -0.45
NUP85-217ENST00000581335 PITPNM1O00562 1244 aa12.21□□□□□ -0.45
NUP85-217ENST00000581335 PYGBP11216 843 aa12.21□□□□□ -0.45
NUP85-217ENST00000581335 SYTL4Q96C24 671 aaPredicted RBP12.21□□□□□ -0.45
NUP85-217ENST00000581335 SYT17Q9BSW7 474 aa12.21□□□□□ -0.45
NUP85-217ENST00000581335 FHDC1Q9C0D6 1143 aaPredicted RBP12.21□□□□□ -0.45
NUP85-217ENST00000581335 STK24Q9Y6E0 443 aa12.21□□□□□ -0.45
NUP85-217ENST00000581335 MEGF6O75095 1541 aa12.21□□□□□ -0.46
NUP85-217ENST00000581335 CGNL1Q0VF96 1302 aa12.2□□□□□ -0.46
NUP85-217ENST00000581335 ARXQ96QS3 562 aa12.2□□□□□ -0.46
NUP85-217ENST00000581335 TIMELESSQ9UNS1 1208 aa12.2□□□□□ -0.46
NUP85-217ENST00000581335 SMG6Q86US8 1419 aaKnown RBP12.2□□□□□ -0.46
NUP85-217ENST00000581335 NSD2O96028 1365 aa12.19□□□□□ -0.46
NUP85-217ENST00000581335 INSRP06213 1382 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 221.7 ms