RNA–Protein interactions for RNA: ENST00000581108.5

CSNK1D-216, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-216ENST00000581108 SHANK3Q9BYB0 1731 aa29.43■■■□□ 2.3
CSNK1D-216ENST00000581108 MAP2P11137 1827 aaKnown RBP29.43■■■□□ 2.3
CSNK1D-216ENST00000581108 PPM1GO15355 546 aaPredicted RBP29.41■■■□□ 2.3
CSNK1D-216ENST00000581108 PDGFDQ9GZP0 370 aaPredicted RBP29.4■■■□□ 2.3
CSNK1D-216ENST00000581108 RAPGEF4Q8WZA2 1011 aa29.39■■■□□ 2.3
CSNK1D-216ENST00000581108 SPON1Q9HCB6 807 aa29.39■■■□□ 2.3
CSNK1D-216ENST00000581108 STK32BQ9NY57 414 aa29.39■■■□□ 2.3
CSNK1D-216ENST00000581108 PANK3Q9H999 370 aa29.38■■■□□ 2.29
CSNK1D-216ENST00000581108 PRIM1P49642 420 aaKnown RBP29.37■■■□□ 2.29
CSNK1D-216ENST00000581108 SLC15A2Q16348 729 aa29.37■■■□□ 2.29
CSNK1D-216ENST00000581108 CASZ1Q86V15 1759 aa29.36■■■□□ 2.29
CSNK1D-216ENST00000581108 TATP17735 454 aaPredicted RBP29.36■■■□□ 2.29
CSNK1D-216ENST00000581108 SYTL4Q96C24 671 aaPredicted RBP29.36■■■□□ 2.29
CSNK1D-216ENST00000581108 DOT1LQ8TEK3 1739 aa29.36■■■□□ 2.29
CSNK1D-216ENST00000581108 ANKRD26Q9UPS8 1709 aa29.36■■■□□ 2.29
CSNK1D-216ENST00000581108 POLKQ9UBT6 870 aa29.34■■■□□ 2.29
CSNK1D-216ENST00000581108 TNNT2P45379 298 aaPredicted RBP29.33■■■□□ 2.29
CSNK1D-216ENST00000581108 WASHC2AQ641Q2 1341 aa29.33■■■□□ 2.29
CSNK1D-216ENST00000581108 LRRC4BQ9NT99 713 aa29.32■■■□□ 2.28
CSNK1D-216ENST00000581108 ZBTB7AO95365 584 aa29.29■■■□□ 2.28
CSNK1D-216ENST00000581108 PPP1R1BQ9UD71 204 aaPredicted RBP29.29■■■□□ 2.28
CSNK1D-216ENST00000581108 PAPPAQ13219 1627 aa29.29■■■□□ 2.28
CSNK1D-216ENST00000581108 NSD2O96028 1365 aa29.28■■■□□ 2.28
CSNK1D-216ENST00000581108 PCDH11XQ9BZA7 1347 aa29.26■■■□□ 2.27
CSNK1D-216ENST00000581108 PCDH11YQ9BZA8 1340 aa29.26■■■□□ 2.27
CSNK1D-216ENST00000581108 EYA1Q99502 592 aa29.26■■■□□ 2.27
CSNK1D-216ENST00000581108 KCNQ4P56696 695 aa29.25■■■□□ 2.27
CSNK1D-216ENST00000581108 ZNF827Q17R98 1081 aa29.25■■■□□ 2.27
CSNK1D-216ENST00000581108 SLC27A3Q5K4L6 730 aa29.25■■■□□ 2.27
CSNK1D-216ENST00000581108 ATF5Q9Y2D1 282 aaPredicted RBP29.25■■■□□ 2.27
CSNK1D-216ENST00000581108 NCAPD2Q15021 1401 aa29.25■■■□□ 2.27
CSNK1D-216ENST00000581108 CYP27B1O15528 508 aa29.24■■■□□ 2.27
CSNK1D-216ENST00000581108 LY75O60449 1722 aa29.23■■■□□ 2.27
CSNK1D-216ENST00000581108 PKD1L3Q7Z443 1732 aa29.22■■■□□ 2.27
CSNK1D-216ENST00000581108 PTGER2P43116 358 aa29.21■■■□□ 2.27
CSNK1D-216ENST00000581108 EIF4A2Q14240 407 aaKnown RBP29.21■■■□□ 2.27
CSNK1D-216ENST00000581108 AKT1S1Q96B36 256 aa29.21■■■□□ 2.27
CSNK1D-216ENST00000581108 KIF7Q2M1P5 1343 aa29.19■■■□□ 2.26
CSNK1D-216ENST00000581108 MORC1Q86VD1 984 aa29.18■■■□□ 2.26
CSNK1D-216ENST00000581108 MTFR1LQ9H019 292 aa29.18■■■□□ 2.26
CSNK1D-216ENST00000581108 SPG7Q9UQ90 795 aa29.18■■■□□ 2.26
CSNK1D-216ENST00000581108 KNSTRNQ9Y448 316 aa29.18■■■□□ 2.26
CSNK1D-216ENST00000581108 MPRIPQ6WCQ1 1025 aa29.17■■■□□ 2.26
CSNK1D-216ENST00000581108 ITGB4P16144 1822 aa29.17■■■□□ 2.26
CSNK1D-216ENST00000581108 CCNL1Q9UK58 526 aaPredicted RBP29.16■■■□□ 2.26
CSNK1D-216ENST00000581108 TOGARAM1Q9Y4F4 1720 aa29.15■■■□□ 2.26
CSNK1D-216ENST00000581108 NKX1-1Q15270 411 aaPredicted RBP29.13■■■□□ 2.25
CSNK1D-216ENST00000581108 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.13■■■□□ 2.25
CSNK1D-216ENST00000581108 TUBGCP6Q96RT7 1819 aa29.13■■■□□ 2.25
CSNK1D-216ENST00000581108 QSER1Q2KHR3 1735 aa29.12■■■□□ 2.25
CSNK1D-216ENST00000581108 SGIP1Q9BQI5 828 aa29.12■■■□□ 2.25
CSNK1D-216ENST00000581108 TFCP2L1Q9NZI6 479 aa29.12■■■□□ 2.25
CSNK1D-216ENST00000581108 PNPLA7Q6ZV29 1317 aa29.11■■■□□ 2.25
CSNK1D-216ENST00000581108 AMER1Q5JTC6 1135 aaPredicted RBP29.1■■■□□ 2.25
CSNK1D-216ENST00000581108 IGSF1Q8N6C5 1336 aa29.1■■■□□ 2.25
CSNK1D-216ENST00000581108 PIGBQ92521 554 aa29.08■■■□□ 2.25
CSNK1D-216ENST00000581108 PHKG2P15735 406 aa29.07■■■□□ 2.24
CSNK1D-216ENST00000581108 IFNL2Q8IZJ0 200 aa29.07■■■□□ 2.24
CSNK1D-216ENST00000581108 PALLDQ8WX93 1383 aa29.07■■■□□ 2.24
CSNK1D-216ENST00000581108 SLC16A10Q8TF71 515 aa29.05■■■□□ 2.24
CSNK1D-216ENST00000581108 FHDC1Q9C0D6 1143 aaPredicted RBP29.05■■■□□ 2.24
CSNK1D-216ENST00000581108 C5P01031 1676 aa29.05■■■□□ 2.24
CSNK1D-216ENST00000581108 TAF1LQ8IZX4 1826 aa29.04■■■□□ 2.24
CSNK1D-216ENST00000581108 PER1O15534 1290 aaPredicted RBP29.04■■■□□ 2.24
CSNK1D-216ENST00000581108 SMARCC1Q92922 1105 aaPredicted RBP29.04■■■□□ 2.24
CSNK1D-216ENST00000581108 ARXQ96QS3 562 aa29.04■■■□□ 2.24
CSNK1D-216ENST00000581108 SYT17Q9BSW7 474 aa29.03■■■□□ 2.24
CSNK1D-216ENST00000581108 DCAF8L1A6NGE4 600 aa29.01■■■□□ 2.23
CSNK1D-216ENST00000581108 AEBP1Q8IUX7 1158 aa29.01■■■□□ 2.23
CSNK1D-216ENST00000581108 TMOD3Q9NYL9 352 aa29.01■■■□□ 2.23
CSNK1D-216ENST00000581108 COL23A1Q86Y22 540 aaPredicted RBP29■■■□□ 2.23
CSNK1D-216ENST00000581108 PLEKHG2Q9H7P9 1386 aa29■■■□□ 2.23
CSNK1D-216ENST00000581108 PLEKHO1Q53GL0 409 aaPredicted RBP28.99■■■□□ 2.23
CSNK1D-216ENST00000581108 COL24A1Q17RW2 1714 aa28.99■■■□□ 2.23
CSNK1D-216ENST00000581108 MSH5O43196 834 aa28.98■■■□□ 2.23
CSNK1D-216ENST00000581108 IL13P35225 146 aa28.98■■■□□ 2.23
CSNK1D-216ENST00000581108 CC2D1BQ5T0F9 858 aaKnown RBP28.97■■■□□ 2.23
CSNK1D-216ENST00000581108 ASAP1Q9ULH1 1129 aa28.97■■■□□ 2.23
CSNK1D-216ENST00000581108 MTHFSP49914 203 aa28.96■■■□□ 2.23
CSNK1D-216ENST00000581108 SULT6B1Q6IMI4 303 aa28.96■■■□□ 2.23
CSNK1D-216ENST00000581108 HMGB2P26583 209 aaKnown RBP28.95■■■□□ 2.22
CSNK1D-216ENST00000581108 POLD1P28340 1107 aa28.95■■■□□ 2.22
CSNK1D-216ENST00000581108 AMOTQ4VCS5 1084 aa28.95■■■□□ 2.22
CSNK1D-216ENST00000581108 LOC102724428A0A0B4J2F2 783 aa28.94■■■□□ 2.22
CSNK1D-216ENST00000581108 SIK1P57059 783 aa28.94■■■□□ 2.22
CSNK1D-216ENST00000581108 ZNF530Q6P9A1 599 aaPredicted RBP28.94■■■□□ 2.22
CSNK1D-216ENST00000581108 C4BP0C0L5 1744 aa28.94■■■□□ 2.22
CSNK1D-216ENST00000581108 DCAF5Q96JK2 942 aa28.93■■■□□ 2.22
CSNK1D-216ENST00000581108 ATG3Q9NT62 314 aa28.93■■■□□ 2.22
CSNK1D-216ENST00000581108 ERVV-2B6SEH9 535 aa28.91■■■□□ 2.22
CSNK1D-216ENST00000581108 HSP90AB1P08238 724 aaKnown RBP28.91■■■□□ 2.22
CSNK1D-216ENST00000581108 CNGB1Q14028 1251 aaPredicted RBP28.91■■■□□ 2.22
CSNK1D-216ENST00000581108 KDRP35968 1356 aa28.9■■■□□ 2.22
CSNK1D-216ENST00000581108 AK7Q96M32 723 aa28.9■■■□□ 2.22
CSNK1D-216ENST00000581108 MAP3K5Q99683 1374 aa28.89■■■□□ 2.22
CSNK1D-216ENST00000581108 AMIGO3Q86WK7 504 aa28.89■■■□□ 2.22
CSNK1D-216ENST00000581108 KLHL34Q8N239 644 aa28.89■■■□□ 2.22
CSNK1D-216ENST00000581108 LINC00116Q8NCU8 138 aa28.89■■■□□ 2.22
CSNK1D-216ENST00000581108 FLAD1Q8NFF5 587 aa28.89■■■□□ 2.22
CSNK1D-216ENST00000581108 KDM6AO15550 1401 aaPredicted RBP28.88■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms