RNA–Protein interactions for RNA: ENST00000581068.5

SKA2-206, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-206ENST00000581068 NUTM2BA6NNL0 878 aaPredicted RBP14.38□□□□□ -0.11
SKA2-206ENST00000581068 NUTM2EB1AL46 878 aaPredicted RBP14.38□□□□□ -0.11
SKA2-206ENST00000581068 TATP17735 454 aaPredicted RBP14.38□□□□□ -0.11
SKA2-206ENST00000581068 TOM1L2Q6ZVM7 507 aa14.38□□□□□ -0.11
SKA2-206ENST00000581068 NUTM2AQ8IVF1 878 aaPredicted RBP14.38□□□□□ -0.11
SKA2-206ENST00000581068 RAPGEF4Q8WZA2 1011 aa14.38□□□□□ -0.11
SKA2-206ENST00000581068 RTF1Q92541 710 aaKnown RBP14.38□□□□□ -0.11
SKA2-206ENST00000581068 GNAT3A8MTJ3 354 aa14.37□□□□□ -0.11
SKA2-206ENST00000581068 CARD10Q9BWT7 1032 aa14.37□□□□□ -0.11
SKA2-206ENST00000581068 STRN4Q9NRL3 753 aa14.37□□□□□ -0.11
SKA2-206ENST00000581068 BTG4Q9NY30 223 aa14.37□□□□□ -0.11
SKA2-206ENST00000581068 SUPT16HQ9Y5B9 1047 aaKnown RBP14.37□□□□□ -0.11
SKA2-206ENST00000581068 PLEKHG2Q9H7P9 1386 aa14.36□□□□□ -0.11
SKA2-206ENST00000581068 ADAMTS2O95450 1211 aa14.36□□□□□ -0.11
SKA2-206ENST00000581068 GNAI1P63096 354 aa14.36□□□□□ -0.11
SKA2-206ENST00000581068 RCAN3Q9UKA8 241 aa14.36□□□□□ -0.11
SKA2-206ENST00000581068 DLG5Q8TDM6 1919 aa14.36□□□□□ -0.11
SKA2-206ENST00000581068 DCTN1Q14203 1278 aa14.35□□□□□ -0.11
SKA2-206ENST00000581068 THUMPD2Q9BTF0 503 aaKnown RBP14.35□□□□□ -0.11
SKA2-206ENST00000581068 IFT57Q9NWB7 429 aa14.35□□□□□ -0.11
SKA2-206ENST00000581068 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.35□□□□□ -0.11
SKA2-206ENST00000581068 MAP3K5Q99683 1374 aa14.34□□□□□ -0.11
SKA2-206ENST00000581068 HSPA1LP34931 641 aa14.34□□□□□ -0.11
SKA2-206ENST00000581068 AKAP4Q5JQC9 854 aa14.34□□□□□ -0.11
SKA2-206ENST00000581068 ZNF530Q6P9A1 599 aaPredicted RBP14.34□□□□□ -0.11
SKA2-206ENST00000581068 LARP1Q6PKG0 1096 aaKnown RBP14.34□□□□□ -0.11
SKA2-206ENST00000581068 MCM10Q7L590 875 aa14.34□□□□□ -0.11
SKA2-206ENST00000581068 RNF39Q9H2S5 420 aa14.34□□□□□ -0.11
SKA2-206ENST00000581068 SPG7Q9UQ90 795 aa14.34□□□□□ -0.11
SKA2-206ENST00000581068 LAS1LQ9Y4W2 734 aaKnown RBP14.34□□□□□ -0.11
SKA2-206ENST00000581068 SPATA31A6Q5VVP1 1343 aa14.34□□□□□ -0.11
SKA2-206ENST00000581068 NEFLP07196 543 aa14.33□□□□□ -0.12
SKA2-206ENST00000581068 ZNF853P0CG23 659 aa14.33□□□□□ -0.12
SKA2-206ENST00000581068 C1orf141Q5JVX7 400 aa14.33□□□□□ -0.12
SKA2-206ENST00000581068 CFAP44Q96MT7 982 aa14.33□□□□□ -0.12
SKA2-206ENST00000581068 GTF3C3Q9Y5Q9 886 aa14.33□□□□□ -0.12
SKA2-206ENST00000581068 FANCIQ9NVI1 1328 aa14.33□□□□□ -0.12
SKA2-206ENST00000581068 CRB1P82279 1406 aa14.32□□□□□ -0.12
SKA2-206ENST00000581068 TSR2Q969E8 191 aaKnown RBP14.32□□□□□ -0.12
SKA2-206ENST00000581068 CT47B1P0C2W7 299 aaPredicted RBP14.31□□□□□ -0.12
SKA2-206ENST00000581068 MEGF6O75095 1541 aa14.31□□□□□ -0.12
SKA2-206ENST00000581068 CHL1O00533 1208 aa14.3□□□□□ -0.12
SKA2-206ENST00000581068 IL2RBP14784 551 aa14.3□□□□□ -0.12
SKA2-206ENST00000581068 EXOSC9Q06265 439 aaKnown RBP14.3□□□□□ -0.12
SKA2-206ENST00000581068 IL17REQ8NFR9 667 aa14.3□□□□□ -0.12
SKA2-206ENST00000581068 RNF123Q5XPI4 1314 aa14.3□□□□□ -0.12
SKA2-206ENST00000581068 IFNL2Q8IZJ0 200 aa14.29□□□□□ -0.12
SKA2-206ENST00000581068 MBIPQ9NS73 344 aa14.29□□□□□ -0.12
SKA2-206ENST00000581068 BABAM1Q9NWV8 329 aa14.29□□□□□ -0.12
SKA2-206ENST00000581068 OVOS2A0A0G2JMS6 1433 aa14.29□□□□□ -0.12
SKA2-206ENST00000581068 RNMTO43148 476 aaKnown RBP14.28□□□□□ -0.12
SKA2-206ENST00000581068 SLIT2O94813 1529 aa14.28□□□□□ -0.12
SKA2-206ENST00000581068 TAF7Q15545 349 aaPredicted RBP14.28□□□□□ -0.12
SKA2-206ENST00000581068 PLCH1Q4KWH8 1693 aa14.28□□□□□ -0.12
SKA2-206ENST00000581068 ZCRB1Q8TBF4 217 aaKnown RBP14.28□□□□□ -0.12
SKA2-206ENST00000581068 NGLY1Q96IV0 654 aa14.28□□□□□ -0.12
SKA2-206ENST00000581068 CEMIPQ8WUJ3 1361 aa14.27□□□□□ -0.12
SKA2-206ENST00000581068 HSP90AB1P08238 724 aaKnown RBP14.27□□□□□ -0.13
SKA2-206ENST00000581068 PHKG2P15735 406 aa14.27□□□□□ -0.13
SKA2-206ENST00000581068 MPRIPQ6WCQ1 1025 aa14.27□□□□□ -0.13
SKA2-206ENST00000581068 LGR6Q9HBX8 967 aa14.27□□□□□ -0.13
SKA2-206ENST00000581068 PARP4Q9UKK3 1724 aaKnown RBP14.27□□□□□ -0.13
SKA2-206ENST00000581068 RRP1P56182 461 aaKnown RBP14.26□□□□□ -0.13
SKA2-206ENST00000581068 FKBP8Q14318 412 aa14.26□□□□□ -0.13
SKA2-206ENST00000581068 C8orf37Q96NL8 207 aa14.26□□□□□ -0.13
SKA2-206ENST00000581068 USP35Q9P2H5 1018 aa14.26□□□□□ -0.13
SKA2-206ENST00000581068 TSPYL4Q9UJ04 414 aa14.26□□□□□ -0.13
SKA2-206ENST00000581068 THRAP3Q9Y2W1 955 aaKnown RBP14.26□□□□□ -0.13
SKA2-206ENST00000581068 PKD1L3Q7Z443 1732 aa14.26□□□□□ -0.13
SKA2-206ENST00000581068 NWD2Q9ULI1 1742 aa14.26□□□□□ -0.13
SKA2-206ENST00000581068 PCDH11XQ9BZA7 1347 aa14.25□□□□□ -0.13
SKA2-206ENST00000581068 PCDH11YQ9BZA8 1340 aa14.25□□□□□ -0.13
SKA2-206ENST00000581068 NRAPQ86VF7 1730 aa14.25□□□□□ -0.13
SKA2-206ENST00000581068 TEFQ10587 303 aa14.25□□□□□ -0.13
SKA2-206ENST00000581068 MEX3CQ5U5Q3 659 aaKnown RBP14.25□□□□□ -0.13
SKA2-206ENST00000581068 UNC5CLQ8IV45 518 aa14.25□□□□□ -0.13
SKA2-206ENST00000581068 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.25□□□□□ -0.13
SKA2-206ENST00000581068 CDCA7Q9BWT1 371 aaPredicted RBP14.25□□□□□ -0.13
SKA2-206ENST00000581068 LRRC37A3O60309 1634 aa14.25□□□□□ -0.13
SKA2-206ENST00000581068 SPATA31A1Q5TZJ5 1347 aa14.24□□□□□ -0.13
SKA2-206ENST00000581068 CYP27B1O15528 508 aa14.24□□□□□ -0.13
SKA2-206ENST00000581068 RARSP54136 660 aaKnown RBP14.24□□□□□ -0.13
SKA2-206ENST00000581068 FNBP4Q8N3X1 1017 aaPredicted RBP14.24□□□□□ -0.13
SKA2-206ENST00000581068 ZNF428Q96B54 188 aa14.24□□□□□ -0.13
SKA2-206ENST00000581068 DCAF5Q96JK2 942 aa14.24□□□□□ -0.13
SKA2-206ENST00000581068 LRP6O75581 1613 aa14.23□□□□□ -0.13
SKA2-206ENST00000581068 SPATA31A5Q5VU36 1347 aa14.23□□□□□ -0.13
SKA2-206ENST00000581068 SPATA31A7Q8IWB4 1347 aa14.23□□□□□ -0.13
SKA2-206ENST00000581068 MIS18AQ9NYP9 233 aa14.23□□□□□ -0.13
SKA2-206ENST00000581068 CCDC9Q9Y3X0 531 aaKnown RBP14.23□□□□□ -0.13
SKA2-206ENST00000581068 DISP2A7MBM2 1401 aa14.23□□□□□ -0.13
SKA2-206ENST00000581068 VAMP4O75379 141 aa14.22□□□□□ -0.13
SKA2-206ENST00000581068 BCAR3O75815 825 aa14.22□□□□□ -0.13
SKA2-206ENST00000581068 VPS72Q15906 364 aa14.22□□□□□ -0.13
SKA2-206ENST00000581068 TWISTNBQ3B726 338 aaPredicted RBP14.22□□□□□ -0.13
SKA2-206ENST00000581068 ERICH6BQ5W0A0 696 aa14.22□□□□□ -0.13
SKA2-206ENST00000581068 C8orf58Q8NAV2 365 aa14.22□□□□□ -0.13
SKA2-206ENST00000581068 ADAMTS7Q9UKP4 1686 aa14.21□□□□□ -0.13
SKA2-206ENST00000581068 EXOC5O00471 708 aa14.21□□□□□ -0.13
SKA2-206ENST00000581068 IRX6P78412 446 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms