RNA–Protein interactions for RNA: ENST00000580977.1

C19orf47-205, Transcript of chromosome 19 open reading frame 47, humanhuman

TSL 4

Gene C19orf47, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf47-205ENST00000580977 NBPF4Q96M43 638 aa20.84■□□□□ 0.93
C19orf47-205ENST00000580977 RAPGEF4Q8WZA2 1011 aa20.83■□□□□ 0.93
C19orf47-205ENST00000580977 PDGFDQ9GZP0 370 aaPredicted RBP20.83■□□□□ 0.93
C19orf47-205ENST00000580977 ANKRD26Q9UPS8 1709 aa20.83■□□□□ 0.92
C19orf47-205ENST00000580977 ZBTB7AO95365 584 aa20.82■□□□□ 0.92
C19orf47-205ENST00000580977 HSP90AB2PQ58FF8 381 aa20.81■□□□□ 0.92
C19orf47-205ENST00000580977 SLC27A3Q5K4L6 730 aa20.81■□□□□ 0.92
C19orf47-205ENST00000580977 TATP17735 454 aaPredicted RBP20.8■□□□□ 0.92
C19orf47-205ENST00000580977 USHBP1Q8N6Y0 703 aa20.8■□□□□ 0.92
C19orf47-205ENST00000580977 SYTL4Q96C24 671 aaPredicted RBP20.8■□□□□ 0.92
C19orf47-205ENST00000580977 MTFR1LQ9H019 292 aa20.8■□□□□ 0.92
C19orf47-205ENST00000580977 LY75O60449 1722 aa20.79■□□□□ 0.92
C19orf47-205ENST00000580977 QSER1Q2KHR3 1735 aa20.79■□□□□ 0.92
C19orf47-205ENST00000580977 PRIM1P49642 420 aaKnown RBP20.79■□□□□ 0.92
C19orf47-205ENST00000580977 NSD2O96028 1365 aa20.79■□□□□ 0.92
C19orf47-205ENST00000580977 PTGER2P43116 358 aa20.78■□□□□ 0.92
C19orf47-205ENST00000580977 EIF4G2P78344 907 aaKnown RBP eCLIP20.78■□□□□ 0.92
C19orf47-205ENST00000580977 LRRC4BQ9NT99 713 aa20.78■□□□□ 0.92
C19orf47-205ENST00000580977 EMILIN1Q9Y6C2 1016 aa20.78■□□□□ 0.92
C19orf47-205ENST00000580977 DCAF8L1A6NGE4 600 aa20.77■□□□□ 0.92
C19orf47-205ENST00000580977 ZNF827Q17R98 1081 aa20.77■□□□□ 0.92
C19orf47-205ENST00000580977 CCER1Q8TC90 406 aaPredicted RBP20.77■□□□□ 0.92
C19orf47-205ENST00000580977 ATF5Q9Y2D1 282 aaPredicted RBP20.77■□□□□ 0.92
C19orf47-205ENST00000580977 PCDH11XQ9BZA7 1347 aa20.77■□□□□ 0.91
C19orf47-205ENST00000580977 PCDH11YQ9BZA8 1340 aa20.77■□□□□ 0.91
C19orf47-205ENST00000580977 NCAPD2Q15021 1401 aa20.76■□□□□ 0.91
C19orf47-205ENST00000580977 PKD1L3Q7Z443 1732 aa20.75■□□□□ 0.91
C19orf47-205ENST00000580977 AKT1S1Q96B36 256 aa20.75■□□□□ 0.91
C19orf47-205ENST00000580977 POLR3GLQ9BT43 218 aa20.75■□□□□ 0.91
C19orf47-205ENST00000580977 WASHC2AQ641Q2 1341 aa20.74■□□□□ 0.91
C19orf47-205ENST00000580977 MAP2P11137 1827 aaKnown RBP20.74■□□□□ 0.91
C19orf47-205ENST00000580977 PPM1GO15355 546 aaPredicted RBP20.73■□□□□ 0.91
C19orf47-205ENST00000580977 HSPA5P11021 654 aaKnown RBP20.73■□□□□ 0.91
C19orf47-205ENST00000580977 SGIP1Q9BQI5 828 aa20.73■□□□□ 0.91
C19orf47-205ENST00000580977 TUBGCP6Q96RT7 1819 aa20.71■□□□□ 0.91
C19orf47-205ENST00000580977 SLC16A10Q8TF71 515 aa20.7■□□□□ 0.9
C19orf47-205ENST00000580977 CCNL1Q9UK58 526 aaPredicted RBP20.7■□□□□ 0.9
C19orf47-205ENST00000580977 POLKQ9UBT6 870 aa20.69■□□□□ 0.9
C19orf47-205ENST00000580977 TOGARAM1Q9Y4F4 1720 aa20.69■□□□□ 0.9
C19orf47-205ENST00000580977 CYP27B1O15528 508 aa20.68■□□□□ 0.9
C19orf47-205ENST00000580977 HMGB2P26583 209 aaKnown RBP20.68■□□□□ 0.9
C19orf47-205ENST00000580977 FHDC1Q9C0D6 1143 aaPredicted RBP20.68■□□□□ 0.9
C19orf47-205ENST00000580977 TFCP2L1Q9NZI6 479 aa20.68■□□□□ 0.9
C19orf47-205ENST00000580977 PNPLA7Q6ZV29 1317 aa20.68■□□□□ 0.9
C19orf47-205ENST00000580977 COL24A1Q17RW2 1714 aa20.67■□□□□ 0.9
C19orf47-205ENST00000580977 ARXQ96QS3 562 aa20.67■□□□□ 0.9
C19orf47-205ENST00000580977 SPG7Q9UQ90 795 aa20.67■□□□□ 0.9
C19orf47-205ENST00000580977 MAP3K5Q99683 1374 aa20.67■□□□□ 0.9
C19orf47-205ENST00000580977 C5P01031 1676 aa20.67■□□□□ 0.9
C19orf47-205ENST00000580977 YY1P25490 414 aa20.66■□□□□ 0.9
C19orf47-205ENST00000580977 KCNQ4P56696 695 aa20.66■□□□□ 0.9
C19orf47-205ENST00000580977 SYT17Q9BSW7 474 aa20.66■□□□□ 0.9
C19orf47-205ENST00000580977 PLEKHG2Q9H7P9 1386 aa20.66■□□□□ 0.9
C19orf47-205ENST00000580977 ITGB4P16144 1822 aa20.65■□□□□ 0.9
C19orf47-205ENST00000580977 PALLDQ8WX93 1383 aa20.65■□□□□ 0.9
C19orf47-205ENST00000580977 EYA1Q99502 592 aa20.65■□□□□ 0.9
C19orf47-205ENST00000580977 PANK3Q9H999 370 aa20.65■□□□□ 0.9
C19orf47-205ENST00000580977 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.65■□□□□ 0.9
C19orf47-205ENST00000580977 POLD1P28340 1107 aa20.64■□□□□ 0.89
C19orf47-205ENST00000580977 TNNT2P45379 298 aaPredicted RBP20.63■□□□□ 0.89
C19orf47-205ENST00000580977 NKX1-1Q15270 411 aaPredicted RBP20.63■□□□□ 0.89
C19orf47-205ENST00000580977 MPRIPQ6WCQ1 1025 aa20.63■□□□□ 0.89
C19orf47-205ENST00000580977 EIF4A2Q14240 407 aaKnown RBP20.62■□□□□ 0.89
C19orf47-205ENST00000580977 SMARCC1Q92922 1105 aaPredicted RBP20.62■□□□□ 0.89
C19orf47-205ENST00000580977 TAF1LQ8IZX4 1826 aa20.62■□□□□ 0.89
C19orf47-205ENST00000580977 IGSF1Q8N6C5 1336 aa20.59■□□□□ 0.89
C19orf47-205ENST00000580977 IFNL2Q8IZJ0 200 aa20.58■□□□□ 0.89
C19orf47-205ENST00000580977 C4BP0C0L5 1744 aa20.58■□□□□ 0.88
C19orf47-205ENST00000580977 PHKG2P15735 406 aa20.57■□□□□ 0.88
C19orf47-205ENST00000580977 MORC1Q86VD1 984 aa20.57■□□□□ 0.88
C19orf47-205ENST00000580977 FLAD1Q8NFF5 587 aa20.57■□□□□ 0.88
C19orf47-205ENST00000580977 PIGBQ92521 554 aa20.57■□□□□ 0.88
C19orf47-205ENST00000580977 MSH5O43196 834 aa20.56■□□□□ 0.88
C19orf47-205ENST00000580977 COL23A1Q86Y22 540 aaPredicted RBP20.56■□□□□ 0.88
C19orf47-205ENST00000580977 TMOD3Q9NYL9 352 aa20.56■□□□□ 0.88
C19orf47-205ENST00000580977 KNSTRNQ9Y448 316 aa20.56■□□□□ 0.88
C19orf47-205ENST00000580977 KLHL34Q8N239 644 aa20.53■□□□□ 0.88
C19orf47-205ENST00000580977 AK7Q96M32 723 aa20.53■□□□□ 0.88
C19orf47-205ENST00000580977 HSP90AB1P08238 724 aaKnown RBP20.52■□□□□ 0.88
C19orf47-205ENST00000580977 UBR3Q6ZT12 1888 aa20.52■□□□□ 0.87
C19orf47-205ENST00000580977 KIF7Q2M1P5 1343 aa20.52■□□□□ 0.87
C19orf47-205ENST00000580977 LOC102724428A0A0B4J2F2 783 aa20.51■□□□□ 0.87
C19orf47-205ENST00000580977 SIK1P57059 783 aa20.51■□□□□ 0.87
C19orf47-205ENST00000580977 PLEKHO1Q53GL0 409 aaPredicted RBP20.51■□□□□ 0.87
C19orf47-205ENST00000580977 CHD4Q14839 1912 aa20.51■□□□□ 0.87
C19orf47-205ENST00000580977 AMOTQ4VCS5 1084 aa20.49■□□□□ 0.87
C19orf47-205ENST00000580977 AMER1Q5JTC6 1135 aaPredicted RBP20.49■□□□□ 0.87
C19orf47-205ENST00000580977 DCAF5Q96JK2 942 aa20.49■□□□□ 0.87
C19orf47-205ENST00000580977 GPR162Q16538 588 aa20.48■□□□□ 0.87
C19orf47-205ENST00000580977 MSL1Q68DK7 614 aa20.48■□□□□ 0.87
C19orf47-205ENST00000580977 ASAP1Q9ULH1 1129 aa20.48■□□□□ 0.87
C19orf47-205ENST00000580977 ZNF831Q5JPB2 1677 aa20.48■□□□□ 0.87
C19orf47-205ENST00000580977 KDRP35968 1356 aa20.47■□□□□ 0.87
C19orf47-205ENST00000580977 ERVV-2B6SEH9 535 aa20.47■□□□□ 0.87
C19orf47-205ENST00000580977 SSFA2P28290 1259 aa20.47■□□□□ 0.87
C19orf47-205ENST00000580977 ATG3Q9NT62 314 aa20.47■□□□□ 0.87
C19orf47-205ENST00000580977 ZNF530Q6P9A1 599 aaPredicted RBP20.46■□□□□ 0.87
C19orf47-205ENST00000580977 LINC00116Q8NCU8 138 aa20.46■□□□□ 0.87
C19orf47-205ENST00000580977 KDM6AO15550 1401 aaPredicted RBP20.45■□□□□ 0.86
C19orf47-205ENST00000580977 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 651.1 ms