RNA–Protein interactions for RNA: ENST00000580886.5

EIF4A1-215, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 2

Gene EIF4A1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-215ENST00000580886 PARP4Q9UKK3 1724 aaKnown RBP13.32□□□□□ -0.28
EIF4A1-215ENST00000580886 PKD1L3Q7Z443 1732 aa13.31□□□□□ -0.28
EIF4A1-215ENST00000580886 U2AF1L5P0DN76 240 aaPredicted RBP13.31□□□□□ -0.28
EIF4A1-215ENST00000580886 U2AF1Q01081 240 aaKnown RBP eCLIP13.31□□□□□ -0.281e-10■■■■□ 21.4
EIF4A1-215ENST00000580886 USHBP1Q8N6Y0 703 aa13.31□□□□□ -0.28
EIF4A1-215ENST00000580886 BCL9O00512 1426 aa13.3□□□□□ -0.28
EIF4A1-215ENST00000580886 U2SURPO15042 1029 aaKnown RBP13.29□□□□□ -0.28
EIF4A1-215ENST00000580886 HMOX1P09601 288 aa13.29□□□□□ -0.28
EIF4A1-215ENST00000580886 NKX1-1Q15270 411 aaPredicted RBP13.29□□□□□ -0.28
EIF4A1-215ENST00000580886 AMOTQ4VCS5 1084 aa13.29□□□□□ -0.28
EIF4A1-215ENST00000580886 PHACTR3Q96KR7 559 aa13.29□□□□□ -0.28
EIF4A1-215ENST00000580886 PNNQ9H307 717 aaKnown RBP13.29□□□□□ -0.28
EIF4A1-215ENST00000580886 TNS2Q63HR2 1409 aa13.29□□□□□ -0.28
EIF4A1-215ENST00000580886 SHANK3Q9BYB0 1731 aa13.28□□□□□ -0.28
EIF4A1-215ENST00000580886 TATP17735 454 aaPredicted RBP13.28□□□□□ -0.28
EIF4A1-215ENST00000580886 RXRBP28702 533 aa13.28□□□□□ -0.28
EIF4A1-215ENST00000580886 PRKAR2BP31323 418 aa13.28□□□□□ -0.28
EIF4A1-215ENST00000580886 RAPGEF4Q8WZA2 1011 aa13.28□□□□□ -0.28
EIF4A1-215ENST00000580886 WDR43Q15061 677 aaKnown RBP eCLIP13.27□□□□□ -0.29
EIF4A1-215ENST00000580886 FAM98CQ17RN3 349 aaKnown RBP13.27□□□□□ -0.29
EIF4A1-215ENST00000580886 RUNDC1Q96C34 613 aa13.27□□□□□ -0.29
EIF4A1-215ENST00000580886 LRRC37A3O60309 1634 aa13.27□□□□□ -0.29
EIF4A1-215ENST00000580886 ADAMTS7Q9UKP4 1686 aa13.27□□□□□ -0.29
EIF4A1-215ENST00000580886 CYP27B1O15528 508 aa13.26□□□□□ -0.29
EIF4A1-215ENST00000580886 MTHFSDQ2M296 383 aaKnown RBP13.26□□□□□ -0.29
EIF4A1-215ENST00000580886 PLEKHO1Q53GL0 409 aaPredicted RBP13.26□□□□□ -0.29
EIF4A1-215ENST00000580886 SEPT12Q8IYM1 358 aa13.26□□□□□ -0.29
EIF4A1-215ENST00000580886 ZCRB1Q8TBF4 217 aaKnown RBP13.26□□□□□ -0.29
EIF4A1-215ENST00000580886 USP35Q9P2H5 1018 aa13.26□□□□□ -0.29
EIF4A1-215ENST00000580886 RGS12O14924 1447 aa13.25□□□□□ -0.29
EIF4A1-215ENST00000580886 EXOC5O00471 708 aa13.25□□□□□ -0.29
EIF4A1-215ENST00000580886 HOXD11P31277 338 aaPredicted RBP13.25□□□□□ -0.29
EIF4A1-215ENST00000580886 ILDR2Q71H61 639 aa13.25□□□□□ -0.29
EIF4A1-215ENST00000580886 HTATSF1O43719 755 aaKnown RBP13.24□□□□□ -0.29
EIF4A1-215ENST00000580886 PHKG2P15735 406 aa13.24□□□□□ -0.29
EIF4A1-215ENST00000580886 DDB1Q16531 1140 aa13.24□□□□□ -0.29
EIF4A1-215ENST00000580886 MARCH10Q8NA82 808 aaPredicted RBP13.24□□□□□ -0.29
EIF4A1-215ENST00000580886 SPG7Q9UQ90 795 aa13.24□□□□□ -0.29
EIF4A1-215ENST00000580886 CCDC9Q9Y3X0 531 aaKnown RBP13.24□□□□□ -0.29
EIF4A1-215ENST00000580886 TMPOP42166 694 aaKnown RBP13.23□□□□□ -0.29
EIF4A1-215ENST00000580886 NFE2L2Q16236 605 aa13.23□□□□□ -0.29
EIF4A1-215ENST00000580886 CCDC27Q2M243 656 aa13.23□□□□□ -0.29
EIF4A1-215ENST00000580886 AKAP4Q5JQC9 854 aa13.23□□□□□ -0.29
EIF4A1-215ENST00000580886 NGEFQ8N5V2 710 aa13.23□□□□□ -0.29
EIF4A1-215ENST00000580886 GAS2L2Q8NHY3 880 aa13.23□□□□□ -0.29
EIF4A1-215ENST00000580886 CEMIPQ8WUJ3 1361 aa13.22□□□□□ -0.29
EIF4A1-215ENST00000580886 PCDH11XQ9BZA7 1347 aa13.22□□□□□ -0.29
EIF4A1-215ENST00000580886 PCDH11YQ9BZA8 1340 aa13.22□□□□□ -0.29
EIF4A1-215ENST00000580886 SOCS7O14512 581 aa13.22□□□□□ -0.29
EIF4A1-215ENST00000580886 IFNL2Q8IZJ0 200 aa13.22□□□□□ -0.29
EIF4A1-215ENST00000580886 TRIM35Q9UPQ4 493 aa13.21□□□□□ -0.29
EIF4A1-215ENST00000580886 ZNF521Q96K83 1311 aa13.2□□□□□ -0.3
EIF4A1-215ENST00000580886 APAF1O14727 1248 aa13.2□□□□□ -0.3
EIF4A1-215ENST00000580886 FAM9BQ8IZU0 186 aa13.2□□□□□ -0.3
EIF4A1-215ENST00000580886 KDM6AO15550 1401 aaPredicted RBP13.2□□□□□ -0.3
EIF4A1-215ENST00000580886 BRWD3Q6RI45 1802 aa13.2□□□□□ -0.3
EIF4A1-215ENST00000580886 MRC1P22897 1456 aa13.19□□□□□ -0.3
EIF4A1-215ENST00000580886 HSP90AB1P08238 724 aaKnown RBP13.19□□□□□ -0.3
EIF4A1-215ENST00000580886 ZNF530Q6P9A1 599 aaPredicted RBP13.19□□□□□ -0.3
EIF4A1-215ENST00000580886 KRT27Q7Z3Y8 459 aa13.19□□□□□ -0.3
EIF4A1-215ENST00000580886 CCDC146Q8IYE0 955 aa13.19□□□□□ -0.3
EIF4A1-215ENST00000580886 IL17REQ8NFR9 667 aa13.19□□□□□ -0.3
EIF4A1-215ENST00000580886 DCAF5Q96JK2 942 aa13.19□□□□□ -0.3
EIF4A1-215ENST00000580886 MAP3K5Q99683 1374 aa13.19□□□□□ -0.3
EIF4A1-215ENST00000580886 GNAT3A8MTJ3 354 aa13.18□□□□□ -0.3
EIF4A1-215ENST00000580886 MAPK8IP3Q9UPT6 1336 aa13.17□□□□□ -0.3
EIF4A1-215ENST00000580886 ERVV-2B6SEH9 535 aa13.17□□□□□ -0.3
EIF4A1-215ENST00000580886 RNMTO43148 476 aaKnown RBP13.17□□□□□ -0.3
EIF4A1-215ENST00000580886 PDE3BQ13370 1112 aa13.17□□□□□ -0.3
EIF4A1-215ENST00000580886 DLG5Q8TDM6 1919 aa13.16□□□□□ -0.3
EIF4A1-215ENST00000580886 RIPK4P57078 832 aa13.16□□□□□ -0.3
EIF4A1-215ENST00000580886 DDX54Q8TDD1 881 aaKnown RBP13.16□□□□□ -0.3
EIF4A1-215ENST00000580886 LGR6Q9HBX8 967 aa13.16□□□□□ -0.3
EIF4A1-215ENST00000580886 SCN11AQ9UI33 1791 aa13.16□□□□□ -0.3
EIF4A1-215ENST00000580886 TOGARAM1Q9Y4F4 1720 aa13.16□□□□□ -0.3
EIF4A1-215ENST00000580886 NEFMP07197 916 aa13.15□□□□□ -0.3
EIF4A1-215ENST00000580886 ZNF853P0CG23 659 aa13.15□□□□□ -0.3
EIF4A1-215ENST00000580886 C1orf141Q5JVX7 400 aa13.15□□□□□ -0.3
EIF4A1-215ENST00000580886 FAM196AQ6ZSG2 479 aa13.15□□□□□ -0.3
EIF4A1-215ENST00000580886 WWC1Q8IX03 1113 aa13.15□□□□□ -0.3
EIF4A1-215ENST00000580886 BABAM1Q9NWV8 329 aa13.15□□□□□ -0.3
EIF4A1-215ENST00000580886 LMOD3Q0VAK6 560 aa13.14□□□□□ -0.31
EIF4A1-215ENST00000580886 SIPA1L3O60292 1781 aaPredicted RBP13.14□□□□□ -0.31
EIF4A1-215ENST00000580886 IL16Q14005 1332 aa13.13□□□□□ -0.31
EIF4A1-215ENST00000580886 C1QBPQ07021 282 aaKnown RBP13.13□□□□□ -0.31
EIF4A1-215ENST00000580886 MPRIPQ6WCQ1 1025 aa13.13□□□□□ -0.31
EIF4A1-215ENST00000580886 WDR63Q8IWG1 891 aa13.13□□□□□ -0.31
EIF4A1-215ENST00000580886 SLC52A2Q9HAB3 445 aa13.13□□□□□ -0.31
EIF4A1-215ENST00000580886 SBF2Q86WG5 1849 aa13.13□□□□□ -0.31
EIF4A1-215ENST00000580886 NHSQ6T4R5 1651 aa13.12□□□□□ -0.31
EIF4A1-215ENST00000580886 RRP7AQ9Y3A4 280 aaKnown RBP13.12□□□□□ -0.31
EIF4A1-215ENST00000580886 EP400Q96L91 3159 aa13.12□□□□□ -0.31
EIF4A1-215ENST00000580886 CHL1O00533 1208 aa13.11□□□□□ -0.31
EIF4A1-215ENST00000580886 MCM10Q7L590 875 aa13.11□□□□□ -0.31
EIF4A1-215ENST00000580886 TRMT2AQ8IZ69 625 aaKnown RBP13.11□□□□□ -0.31
EIF4A1-215ENST00000580886 BCL11BQ9C0K0 894 aaPredicted RBP13.11□□□□□ -0.31
EIF4A1-215ENST00000580886 HEG1Q9ULI3 1381 aa13.1□□□□□ -0.31
EIF4A1-215ENST00000580886 PRIM1P49642 420 aaKnown RBP13.1□□□□□ -0.31
EIF4A1-215ENST00000580886 DCTN1Q14203 1278 aa13.1□□□□□ -0.31
EIF4A1-215ENST00000580886 PIGBQ92521 554 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms