RNA–Protein interactions for RNA: ENST00000580738.5

NDEL1-209, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 2

Gene NDEL1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-209ENST00000580738 NSD2O96028 1365 aa27.19■■□□□ 1.94
NDEL1-209ENST00000580738 YBX3P16989 372 aaKnown RBP eCLIP27.18■■□□□ 1.94
NDEL1-209ENST00000580738 TUBGCP6Q96RT7 1819 aa27.18■■□□□ 1.94
NDEL1-209ENST00000580738 CEP350Q5VT06 3117 aa27.17■■□□□ 1.94
NDEL1-209ENST00000580738 FBLN1P23142 703 aa27.16■■□□□ 1.94
NDEL1-209ENST00000580738 SHANK3Q9BYB0 1731 aa27.16■■□□□ 1.94
NDEL1-209ENST00000580738 CCNL1Q9UK58 526 aaPredicted RBP27.15■■□□□ 1.94
NDEL1-209ENST00000580738 MAP3K19Q56UN5 1328 aa27.15■■□□□ 1.94
NDEL1-209ENST00000580738 MSH5O43196 834 aa27.14■■□□□ 1.94
NDEL1-209ENST00000580738 COL23A1Q86Y22 540 aaPredicted RBP27.14■■□□□ 1.94
NDEL1-209ENST00000580738 ZCRB1Q8TBF4 217 aaKnown RBP27.14■■□□□ 1.94
NDEL1-209ENST00000580738 DOT1LQ8TEK3 1739 aa27.13■■□□□ 1.93
NDEL1-209ENST00000580738 HOXC9P31274 260 aa27.13■■□□□ 1.93
NDEL1-209ENST00000580738 LY75O60449 1722 aa27.12■■□□□ 1.93
NDEL1-209ENST00000580738 FAM208AQ9UK61 1670 aaKnown RBP27.11■■□□□ 1.93
NDEL1-209ENST00000580738 GRIN3BO60391 1043 aa27.11■■□□□ 1.93
NDEL1-209ENST00000580738 MEGF6O75095 1541 aa27.11■■□□□ 1.93
NDEL1-209ENST00000580738 AMPHP49418 695 aa27.1■■□□□ 1.93
NDEL1-209ENST00000580738 MSL1Q68DK7 614 aa27.1■■□□□ 1.93
NDEL1-209ENST00000580738 COG3Q96JB2 828 aa27.09■■□□□ 1.93
NDEL1-209ENST00000580738 IFFO2Q5TF58 517 aa27.08■■□□□ 1.93
NDEL1-209ENST00000580738 PUS7Q96PZ0 661 aaKnown RBP27.08■■□□□ 1.93
NDEL1-209ENST00000580738 USP47Q96K76 1375 aa27.07■■□□□ 1.92
NDEL1-209ENST00000580738 RGPD2P0DJD1 1756 aa27.05■■□□□ 1.92
NDEL1-209ENST00000580738 NBPF6Q5VWK0 638 aa27.05■■□□□ 1.92
NDEL1-209ENST00000580738 USHBP1Q8N6Y0 703 aa27.05■■□□□ 1.92
NDEL1-209ENST00000580738 NBPF4Q96M43 638 aa27.05■■□□□ 1.92
NDEL1-209ENST00000580738 ATP10DQ9P241 1426 aa27.03■■□□□ 1.92
NDEL1-209ENST00000580738 RRS1Q15050 365 aaKnown RBP27.01■■□□□ 1.91
NDEL1-209ENST00000580738 TESK2Q96S53 571 aa27■■□□□ 1.91
NDEL1-209ENST00000580738 CD2APQ9Y5K6 639 aa26.99■■□□□ 1.91
NDEL1-209ENST00000580738 RAPGEF4Q8WZA2 1011 aa26.98■■□□□ 1.91
NDEL1-209ENST00000580738 CGNL1Q0VF96 1302 aa26.97■■□□□ 1.91
NDEL1-209ENST00000580738 RTL1A6NKG5 1358 aa26.97■■□□□ 1.91
NDEL1-209ENST00000580738 ST20-MTHFSA0A0A6YYL1 179 aa26.96■■□□□ 1.91
NDEL1-209ENST00000580738 GPBP1L1Q9HC44 474 aaPredicted RBP26.95■■□□□ 1.9
NDEL1-209ENST00000580738 PALLDQ8WX93 1383 aa26.95■■□□□ 1.9
NDEL1-209ENST00000580738 C5P01031 1676 aa26.95■■□□□ 1.9
NDEL1-209ENST00000580738 TATP17735 454 aaPredicted RBP26.94■■□□□ 1.9
NDEL1-209ENST00000580738 MPRIPQ6WCQ1 1025 aa26.94■■□□□ 1.9
NDEL1-209ENST00000580738 AMIGO3Q86WK7 504 aa26.94■■□□□ 1.9
NDEL1-209ENST00000580738 FLAD1Q8NFF5 587 aa26.94■■□□□ 1.9
NDEL1-209ENST00000580738 GGNBP2Q9H3C7 697 aa26.94■■□□□ 1.9
NDEL1-209ENST00000580738 FYB1O15117 783 aa26.93■■□□□ 1.9
NDEL1-209ENST00000580738 ZNF526Q8TF50 670 aaPredicted RBP26.93■■□□□ 1.9
NDEL1-209ENST00000580738 SMIM5Q71RC9 77 aa26.92■■□□□ 1.9
NDEL1-209ENST00000580738 ADCY9O60503 1353 aa26.92■■□□□ 1.9
NDEL1-209ENST00000580738 PCDH11XQ9BZA7 1347 aa26.91■■□□□ 1.9
NDEL1-209ENST00000580738 PCDH11YQ9BZA8 1340 aa26.91■■□□□ 1.9
NDEL1-209ENST00000580738 HSP90AB2PQ58FF8 381 aa26.91■■□□□ 1.9
NDEL1-209ENST00000580738 WWC3Q9ULE0 1092 aa26.91■■□□□ 1.9
NDEL1-209ENST00000580738 CYP27B1O15528 508 aa26.9■■□□□ 1.9
NDEL1-209ENST00000580738 SMG6Q86US8 1419 aaKnown RBP26.9■■□□□ 1.9
NDEL1-209ENST00000580738 TONSLQ96HA7 1378 aa26.89■■□□□ 1.9
NDEL1-209ENST00000580738 AK7Q96M32 723 aa26.88■■□□□ 1.89
NDEL1-209ENST00000580738 PHF14O94880 888 aa26.87■■□□□ 1.89
NDEL1-209ENST00000580738 HSPA6P17066 643 aa26.87■■□□□ 1.89
NDEL1-209ENST00000580738 TAF1LQ8IZX4 1826 aa26.87■■□□□ 1.89
NDEL1-209ENST00000580738 INSRP06213 1382 aa26.86■■□□□ 1.89
NDEL1-209ENST00000580738 IGSF1Q8N6C5 1336 aa26.86■■□□□ 1.89
NDEL1-209ENST00000580738 C4BP0C0L5 1744 aa26.85■■□□□ 1.89
NDEL1-209ENST00000580738 HMGB2P26583 209 aaKnown RBP26.85■■□□□ 1.89
NDEL1-209ENST00000580738 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.84■■□□□ 1.89
NDEL1-209ENST00000580738 PIGBQ92521 554 aa26.84■■□□□ 1.89
NDEL1-209ENST00000580738 SMARCC1Q92922 1105 aaPredicted RBP26.84■■□□□ 1.89
NDEL1-209ENST00000580738 TOGARAM1Q9Y4F4 1720 aa26.83■■□□□ 1.89
NDEL1-209ENST00000580738 FLT4P35916 1363 aa26.82■■□□□ 1.88
NDEL1-209ENST00000580738 SLC24A1O60721 1099 aa26.81■■□□□ 1.88
NDEL1-209ENST00000580738 LINC00116Q8NCU8 138 aa26.79■■□□□ 1.88
NDEL1-209ENST00000580738 UBR3Q6ZT12 1888 aa26.78■■□□□ 1.88
NDEL1-209ENST00000580738 ITGB4P16144 1822 aa26.77■■□□□ 1.88
NDEL1-209ENST00000580738 KIF3CO14782 793 aa26.77■■□□□ 1.88
NDEL1-209ENST00000580738 SSFA2P28290 1259 aa26.77■■□□□ 1.88
NDEL1-209ENST00000580738 NKX1-1Q15270 411 aaPredicted RBP26.77■■□□□ 1.88
NDEL1-209ENST00000580738 EMILIN1Q9Y6C2 1016 aa26.77■■□□□ 1.88
NDEL1-209ENST00000580738 KIF24Q5T7B8 1368 aa26.76■■□□□ 1.87
NDEL1-209ENST00000580738 LOC102724428A0A0B4J2F2 783 aa26.76■■□□□ 1.87
NDEL1-209ENST00000580738 SIK1P57059 783 aa26.76■■□□□ 1.87
NDEL1-209ENST00000580738 NSD3Q9BZ95 1437 aa26.75■■□□□ 1.87
NDEL1-209ENST00000580738 TMF1P82094 1093 aa26.75■■□□□ 1.87
NDEL1-209ENST00000580738 ITPK1Q13572 414 aa26.73■■□□□ 1.87
NDEL1-209ENST00000580738 ASAP1Q9ULH1 1129 aa26.73■■□□□ 1.87
NDEL1-209ENST00000580738 PKD1L3Q7Z443 1732 aa26.73■■□□□ 1.87
NDEL1-209ENST00000580738 GNPATO15228 680 aa26.72■■□□□ 1.87
NDEL1-209ENST00000580738 SPG7Q9UQ90 795 aa26.72■■□□□ 1.87
NDEL1-209ENST00000580738 MAP2P11137 1827 aaKnown RBP26.72■■□□□ 1.87
NDEL1-209ENST00000580738 PPM1GO15355 546 aaPredicted RBP26.71■■□□□ 1.87
NDEL1-209ENST00000580738 CARD14Q9BXL6 1004 aa26.71■■□□□ 1.87
NDEL1-209ENST00000580738 TMOD3Q9NYL9 352 aa26.7■■□□□ 1.86
NDEL1-209ENST00000580738 NCAPD2Q15021 1401 aa26.7■■□□□ 1.86
NDEL1-209ENST00000580738 MMP10P09238 476 aa26.69■■□□□ 1.86
NDEL1-209ENST00000580738 ATP6V1AP38606 617 aa26.69■■□□□ 1.86
NDEL1-209ENST00000580738 KIF20BQ96Q89 1820 aa26.69■■□□□ 1.86
NDEL1-209ENST00000580738 EYA1Q99502 592 aa26.66■■□□□ 1.86
NDEL1-209ENST00000580738 ATG3Q9NT62 314 aa26.66■■□□□ 1.86
NDEL1-209ENST00000580738 PXDNLA1KZ92 1463 aa26.66■■□□□ 1.86
NDEL1-209ENST00000580738 CICQ96RK0 1608 aaPredicted RBP26.65■■□□□ 1.86
NDEL1-209ENST00000580738 A0A0G2JLW4 131 aa26.64■■□□□ 1.86
NDEL1-209ENST00000580738 PHKG2P15735 406 aa26.64■■□□□ 1.86
NDEL1-209ENST00000580738 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.64■■□□□ 1.865e-15■□□□□ 10.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms