RNA–Protein interactions for RNA: ENST00000580574.1

CCDC144CP-203, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 3

Gene CCDC144CP, Length 896 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-203ENST00000580574 NRAPQ86VF7 1730 aa17.17■□□□□ 0.34
CCDC144CP-203ENST00000580574 LTV1Q96GA3 475 aaPredicted RBP17.17■□□□□ 0.34
CCDC144CP-203ENST00000580574 PNNQ9H307 717 aaKnown RBP17.17■□□□□ 0.34
CCDC144CP-203ENST00000580574 PRDM11Q9NQV5 511 aa17.17■□□□□ 0.34
CCDC144CP-203ENST00000580574 COL5A2P05997 1499 aaPredicted RBP17.17■□□□□ 0.34
CCDC144CP-203ENST00000580574 ZNF521Q96K83 1311 aa17.17■□□□□ 0.34
CCDC144CP-203ENST00000580574 HSPA1LP34931 641 aa17.16■□□□□ 0.34
CCDC144CP-203ENST00000580574 NGEFQ8N5V2 710 aa17.16■□□□□ 0.34
CCDC144CP-203ENST00000580574 PHACTR3Q96KR7 559 aa17.16■□□□□ 0.34
CCDC144CP-203ENST00000580574 HAP1P54257 671 aaPredicted RBP17.15■□□□□ 0.34
CCDC144CP-203ENST00000580574 NWD2Q9ULI1 1742 aa17.15■□□□□ 0.34
CCDC144CP-203ENST00000580574 TMPOP42166 694 aaKnown RBP17.13■□□□□ 0.33
CCDC144CP-203ENST00000580574 CCDC27Q2M243 656 aa17.13■□□□□ 0.33
CCDC144CP-203ENST00000580574 USHBP1Q8N6Y0 703 aa17.12■□□□□ 0.33
CCDC144CP-203ENST00000580574 FARP1Q9Y4F1 1045 aaPredicted RBP17.12■□□□□ 0.33
CCDC144CP-203ENST00000580574 WDR17Q8IZU2 1322 aa17.12■□□□□ 0.33
CCDC144CP-203ENST00000580574 SALL2Q9Y467 1007 aaPredicted RBP17.11■□□□□ 0.33
CCDC144CP-203ENST00000580574 MAPK8IP3Q9UPT6 1336 aa17.11■□□□□ 0.33
CCDC144CP-203ENST00000580574 LRP6O75581 1613 aa17.1■□□□□ 0.33
CCDC144CP-203ENST00000580574 VIRMAQ69YN4 1812 aaKnown RBP17.1■□□□□ 0.33
CCDC144CP-203ENST00000580574 NFE2L2Q16236 605 aa17.1■□□□□ 0.33
CCDC144CP-203ENST00000580574 TRIM35Q9UPQ4 493 aa17.1■□□□□ 0.33
CCDC144CP-203ENST00000580574 RRP7AQ9Y3A4 280 aaKnown RBP17.1■□□□□ 0.33
CCDC144CP-203ENST00000580574 SPATA31A6Q5VVP1 1343 aa17.1■□□□□ 0.33
CCDC144CP-203ENST00000580574 SLIT2O94813 1529 aa17.1■□□□□ 0.33
CCDC144CP-203ENST00000580574 PKD1L3Q7Z443 1732 aa17.1■□□□□ 0.33
CCDC144CP-203ENST00000580574 WWC1Q8IX03 1113 aa17.09■□□□□ 0.33
CCDC144CP-203ENST00000580574 WNK3Q9BYP7 1800 aa17.09■□□□□ 0.33
CCDC144CP-203ENST00000580574 PLEKHG2Q9H7P9 1386 aa17.08■□□□□ 0.32
CCDC144CP-203ENST00000580574 CENPBP07199 599 aaPredicted RBP17.08■□□□□ 0.32
CCDC144CP-203ENST00000580574 PDE3BQ13370 1112 aa17.08■□□□□ 0.32
CCDC144CP-203ENST00000580574 BTG4Q9NY30 223 aa17.08■□□□□ 0.32
CCDC144CP-203ENST00000580574 PARP4Q9UKK3 1724 aaKnown RBP17.07■□□□□ 0.32
CCDC144CP-203ENST00000580574 NUTM2BA6NNL0 878 aaPredicted RBP17.07■□□□□ 0.32
CCDC144CP-203ENST00000580574 NUTM2EB1AL46 878 aaPredicted RBP17.07■□□□□ 0.32
CCDC144CP-203ENST00000580574 ADAMTS2O95450 1211 aa17.07■□□□□ 0.32
CCDC144CP-203ENST00000580574 MTHFSDQ2M296 383 aaKnown RBP17.07■□□□□ 0.32
CCDC144CP-203ENST00000580574 NUTM2AQ8IVF1 878 aaPredicted RBP17.07■□□□□ 0.32
CCDC144CP-203ENST00000580574 NEFMP07197 916 aa17.06■□□□□ 0.32
CCDC144CP-203ENST00000580574 RIPK4P57078 832 aa17.06■□□□□ 0.32
CCDC144CP-203ENST00000580574 NEUROD2Q15784 382 aa17.06■□□□□ 0.32
CCDC144CP-203ENST00000580574 CARD10Q9BWT7 1032 aa17.06■□□□□ 0.32
CCDC144CP-203ENST00000580574 NLRP2Q9NX02 1062 aa17.06■□□□□ 0.32
CCDC144CP-203ENST00000580574 SHANK3Q9BYB0 1731 aa17.06■□□□□ 0.32
CCDC144CP-203ENST00000580574 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.06■□□□□ 0.32
CCDC144CP-203ENST00000580574 MEGF6O75095 1541 aa17.06■□□□□ 0.32
CCDC144CP-203ENST00000580574 CRB1P82279 1406 aa17.05■□□□□ 0.32
CCDC144CP-203ENST00000580574 GABBR2O75899 941 aa17.05■□□□□ 0.32
CCDC144CP-203ENST00000580574 CSB-PGBD3P0DP91 1061 aa17.05■□□□□ 0.32
CCDC144CP-203ENST00000580574 LARP1Q6PKG0 1096 aaKnown RBP17.05■□□□□ 0.32
CCDC144CP-203ENST00000580574 WDR63Q8IWG1 891 aa17.05■□□□□ 0.32
CCDC144CP-203ENST00000580574 TRMT2AQ8IZ69 625 aaKnown RBP17.05■□□□□ 0.32
CCDC144CP-203ENST00000580574 CDCA7LQ96GN5 454 aa17.05■□□□□ 0.32
CCDC144CP-203ENST00000580574 ADAMTS7Q9UKP4 1686 aa17.04■□□□□ 0.32
CCDC144CP-203ENST00000580574 LRRC37A3O60309 1634 aa17.04■□□□□ 0.32
CCDC144CP-203ENST00000580574 CREBZFQ9NS37 354 aa17.04■□□□□ 0.32
CCDC144CP-203ENST00000580574 GOLGA2Q08379 1002 aa17.03■□□□□ 0.32
CCDC144CP-203ENST00000580574 SLFN5Q08AF3 891 aa17.03■□□□□ 0.32
CCDC144CP-203ENST00000580574 BCL9LQ86UU0 1499 aa17.02■□□□□ 0.32
CCDC144CP-203ENST00000580574 EVA1CP58658 441 aa17.02■□□□□ 0.32
CCDC144CP-203ENST00000580574 TOM1L2Q6ZVM7 507 aa17.02■□□□□ 0.32
CCDC144CP-203ENST00000580574 GAS2L2Q8NHY3 880 aa17.02■□□□□ 0.32
CCDC144CP-203ENST00000580574 STRN4Q9NRL3 753 aa17.02■□□□□ 0.32
CCDC144CP-203ENST00000580574 FNBP4Q8N3X1 1017 aaPredicted RBP17.01■□□□□ 0.31
CCDC144CP-203ENST00000580574 OVOS2A0A0G2JMS6 1433 aa17.01■□□□□ 0.31
CCDC144CP-203ENST00000580574 DISP2A7MBM2 1401 aa17.01■□□□□ 0.31
CCDC144CP-203ENST00000580574 IL16Q14005 1332 aa17■□□□□ 0.31
CCDC144CP-203ENST00000580574 SCN11AQ9UI33 1791 aa17■□□□□ 0.31
CCDC144CP-203ENST00000580574 HTATSF1O43719 755 aaKnown RBP17■□□□□ 0.31
CCDC144CP-203ENST00000580574 AMOTQ4VCS5 1084 aa17■□□□□ 0.31
CCDC144CP-203ENST00000580574 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17■□□□□ 0.31
CCDC144CP-203ENST00000580574 SIPA1L3O60292 1781 aaPredicted RBP17■□□□□ 0.31
CCDC144CP-203ENST00000580574 PLEKHO1Q53GL0 409 aaPredicted RBP16.99■□□□□ 0.31
CCDC144CP-203ENST00000580574 DUSP27Q5VZP5 1158 aa16.99■□□□□ 0.31
CCDC144CP-203ENST00000580574 E9PSI1 815 aa16.98■□□□□ 0.31
CCDC144CP-203ENST00000580574 CD44P16070 742 aaKnown RBP16.98■□□□□ 0.31
CCDC144CP-203ENST00000580574 TATP17735 454 aaPredicted RBP16.98■□□□□ 0.31
CCDC144CP-203ENST00000580574 LMOD3Q0VAK6 560 aa16.98■□□□□ 0.31
CCDC144CP-203ENST00000580574 RAPGEF4Q8WZA2 1011 aa16.98■□□□□ 0.31
CCDC144CP-203ENST00000580574 MAP3K5Q99683 1374 aa16.98■□□□□ 0.31
CCDC144CP-203ENST00000580574 UNC5CLQ8IV45 518 aa16.97■□□□□ 0.31
CCDC144CP-203ENST00000580574 FBXO41Q8TF61 875 aa16.97■□□□□ 0.31
CCDC144CP-203ENST00000580574 SPATA31A1Q5TZJ5 1347 aa16.96■□□□□ 0.31
CCDC144CP-203ENST00000580574 GNAT3A8MTJ3 354 aa16.96■□□□□ 0.31
CCDC144CP-203ENST00000580574 ZNF853P0CG23 659 aa16.96■□□□□ 0.31
CCDC144CP-203ENST00000580574 DCTN1Q14203 1278 aa16.96■□□□□ 0.31
CCDC144CP-203ENST00000580574 NGLY1Q96IV0 654 aa16.96■□□□□ 0.31
CCDC144CP-203ENST00000580574 C8orf37Q96NL8 207 aa16.96■□□□□ 0.31
CCDC144CP-203ENST00000580574 THUMPD2Q9BTF0 503 aaKnown RBP16.96■□□□□ 0.31
CCDC144CP-203ENST00000580574 SPATA31A5Q5VU36 1347 aa16.96■□□□□ 0.3
CCDC144CP-203ENST00000580574 SPATA31A7Q8IWB4 1347 aa16.96■□□□□ 0.3
CCDC144CP-203ENST00000580574 CEMIPQ8WUJ3 1361 aa16.95■□□□□ 0.3
CCDC144CP-203ENST00000580574 IL2RBP14784 551 aa16.95■□□□□ 0.3
CCDC144CP-203ENST00000580574 AKAP4Q5JQC9 854 aa16.95■□□□□ 0.3
CCDC144CP-203ENST00000580574 ZNF530Q6P9A1 599 aaPredicted RBP16.95■□□□□ 0.3
CCDC144CP-203ENST00000580574 IL17REQ8NFR9 667 aa16.95■□□□□ 0.3
CCDC144CP-203ENST00000580574 MCM10Q7L590 875 aa16.94■□□□□ 0.3
CCDC144CP-203ENST00000580574 KDM3BQ7LBC6 1761 aa16.93■□□□□ 0.3
CCDC144CP-203ENST00000580574 VPS72Q15906 364 aa16.93■□□□□ 0.3
CCDC144CP-203ENST00000580574 SPG7Q9UQ90 795 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms