RNA–Protein interactions for RNA: ENST00000580237.5

NDEL1-208, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 4

Gene NDEL1, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-208ENST00000580237 TATP17735 454 aaPredicted RBP14.85□□□□□ -0.03
NDEL1-208ENST00000580237 BCL11BQ9C0K0 894 aaPredicted RBP14.85□□□□□ -0.03
NDEL1-208ENST00000580237 ACSBG1Q96GR2 724 aa14.84□□□□□ -0.03
NDEL1-208ENST00000580237 CNGB1Q14028 1251 aaPredicted RBP14.83□□□□□ -0.04
NDEL1-208ENST00000580237 AMER1Q5JTC6 1135 aaPredicted RBP14.83□□□□□ -0.04
NDEL1-208ENST00000580237 CC2D1BQ5T0F9 858 aaKnown RBP14.83□□□□□ -0.04
NDEL1-208ENST00000580237 ZCRB1Q8TBF4 217 aaKnown RBP14.83□□□□□ -0.04
NDEL1-208ENST00000580237 CAMKK2Q96RR4 588 aa14.83□□□□□ -0.04
NDEL1-208ENST00000580237 PSDA5PKW4 1024 aaPredicted RBP14.82□□□□□ -0.04
NDEL1-208ENST00000580237 PCDH11XQ9BZA7 1347 aa14.82□□□□□ -0.04
NDEL1-208ENST00000580237 PCDH11YQ9BZA8 1340 aa14.82□□□□□ -0.04
NDEL1-208ENST00000580237 EIF4A2Q14240 407 aaKnown RBP14.81□□□□□ -0.04
NDEL1-208ENST00000580237 SYTL4Q96C24 671 aaPredicted RBP14.81□□□□□ -0.04
NDEL1-208ENST00000580237 NCAPD2Q15021 1401 aa14.81□□□□□ -0.04
NDEL1-208ENST00000580237 NBPF14Q5TI25 921 aa14.8□□□□□ -0.04
NDEL1-208ENST00000580237 PTF1AQ7RTS3 328 aa14.8□□□□□ -0.04
NDEL1-208ENST00000580237 ITGB4P16144 1822 aa14.8□□□□□ -0.04
NDEL1-208ENST00000580237 KCNQ2O43526 872 aa14.79□□□□□ -0.04
NDEL1-208ENST00000580237 R3HDM1Q15032 1099 aaKnown RBP14.79□□□□□ -0.04
NDEL1-208ENST00000580237 EYA1Q99502 592 aa14.79□□□□□ -0.04
NDEL1-208ENST00000580237 TOGARAM1Q9Y4F4 1720 aa14.79□□□□□ -0.04
NDEL1-208ENST00000580237 LRP5O75197 1615 aa14.78□□□□□ -0.04
NDEL1-208ENST00000580237 NPC1L1Q9UHC9 1359 aa14.78□□□□□ -0.04
NDEL1-208ENST00000580237 PLSCR1O15162 318 aa14.78□□□□□ -0.04
NDEL1-208ENST00000580237 PER1O15534 1290 aaPredicted RBP14.77□□□□□ -0.05
NDEL1-208ENST00000580237 SPG7Q9UQ90 795 aa14.77□□□□□ -0.05
NDEL1-208ENST00000580237 LY75O60449 1722 aa14.77□□□□□ -0.05
NDEL1-208ENST00000580237 IGSF1Q8N6C5 1336 aa14.76□□□□□ -0.05
NDEL1-208ENST00000580237 TXNRD1Q16881 649 aa14.75□□□□□ -0.05
NDEL1-208ENST00000580237 VIRMAQ69YN4 1812 aaKnown RBP14.74□□□□□ -0.05
NDEL1-208ENST00000580237 PRIM1P49642 420 aaKnown RBP14.74□□□□□ -0.05
NDEL1-208ENST00000580237 MTHFSP49914 203 aa14.74□□□□□ -0.05
NDEL1-208ENST00000580237 PLEKHG2Q9H7P9 1386 aa14.73□□□□□ -0.05
NDEL1-208ENST00000580237 PAPPAQ13219 1627 aa14.73□□□□□ -0.05
NDEL1-208ENST00000580237 CYP27B1O15528 508 aa14.72□□□□□ -0.05
NDEL1-208ENST00000580237 STK32BQ9NY57 414 aa14.72□□□□□ -0.05
NDEL1-208ENST00000580237 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.72□□□□□ -0.053e-15■□□□□ 9.9
NDEL1-208ENST00000580237 CASZ1Q86V15 1759 aa14.71□□□□□ -0.05
NDEL1-208ENST00000580237 SULT6B1Q6IMI4 303 aa14.71□□□□□ -0.05
NDEL1-208ENST00000580237 ANO8Q9HCE9 1232 aaPredicted RBP14.71□□□□□ -0.05
NDEL1-208ENST00000580237 C5P01031 1676 aa14.71□□□□□ -0.06
NDEL1-208ENST00000580237 AEBP1Q8IUX7 1158 aa14.7□□□□□ -0.06
NDEL1-208ENST00000580237 IFNL2Q8IZJ0 200 aa14.7□□□□□ -0.06
NDEL1-208ENST00000580237 TUBGCP6Q96RT7 1819 aa14.7□□□□□ -0.06
NDEL1-208ENST00000580237 TAF1LQ8IZX4 1826 aa14.69□□□□□ -0.06
NDEL1-208ENST00000580237 DIAPH1O60610 1272 aaKnown RBP14.69□□□□□ -0.06
NDEL1-208ENST00000580237 IL13P35225 146 aa14.69□□□□□ -0.06
NDEL1-208ENST00000580237 PLEKHO1Q53GL0 409 aaPredicted RBP14.69□□□□□ -0.06
NDEL1-208ENST00000580237 ZNF530Q6P9A1 599 aaPredicted RBP14.69□□□□□ -0.06
NDEL1-208ENST00000580237 MPRIPQ6WCQ1 1025 aa14.69□□□□□ -0.06
NDEL1-208ENST00000580237 CFAP53Q96M91 514 aa14.69□□□□□ -0.06
NDEL1-208ENST00000580237 KDRP35968 1356 aa14.69□□□□□ -0.06
NDEL1-208ENST00000580237 QSER1Q2KHR3 1735 aa14.69□□□□□ -0.06
NDEL1-208ENST00000580237 COL3A1P02461 1466 aaPredicted RBP14.69□□□□□ -0.06
NDEL1-208ENST00000580237 SCN11AQ9UI33 1791 aa14.68□□□□□ -0.06
NDEL1-208ENST00000580237 PHKG2P15735 406 aa14.68□□□□□ -0.06
NDEL1-208ENST00000580237 ZEB1P37275 1124 aaPredicted RBP14.68□□□□□ -0.06
NDEL1-208ENST00000580237 AMOTQ4VCS5 1084 aa14.68□□□□□ -0.06
NDEL1-208ENST00000580237 C1orf141Q5JVX7 400 aa14.68□□□□□ -0.06
NDEL1-208ENST00000580237 SLC27A3Q5K4L6 730 aa14.68□□□□□ -0.06
NDEL1-208ENST00000580237 PROM2Q8N271 834 aa14.68□□□□□ -0.06
NDEL1-208ENST00000580237 U2SURPO15042 1029 aaKnown RBP14.67□□□□□ -0.06
NDEL1-208ENST00000580237 HSP90AB1P08238 724 aaKnown RBP14.67□□□□□ -0.06
NDEL1-208ENST00000580237 HMOX1P09601 288 aa14.67□□□□□ -0.06
NDEL1-208ENST00000580237 TMOD3Q9NYL9 352 aa14.67□□□□□ -0.06
NDEL1-208ENST00000580237 CCNL1Q9UK58 526 aaPredicted RBP14.67□□□□□ -0.06
NDEL1-208ENST00000580237 PALLDQ8WX93 1383 aa14.67□□□□□ -0.06
NDEL1-208ENST00000580237 NKX1-1Q15270 411 aaPredicted RBP14.65□□□□□ -0.06
NDEL1-208ENST00000580237 SLC15A2Q16348 729 aa14.65□□□□□ -0.06
NDEL1-208ENST00000580237 SMARCC1Q92922 1105 aaPredicted RBP14.64□□□□□ -0.07
NDEL1-208ENST00000580237 PPP2R1AP30153 589 aa14.63□□□□□ -0.07
NDEL1-208ENST00000580237 KCNQ4P56696 695 aa14.63□□□□□ -0.07
NDEL1-208ENST00000580237 DCAF5Q96JK2 942 aa14.63□□□□□ -0.07
NDEL1-208ENST00000580237 LRRC4BQ9NT99 713 aa14.63□□□□□ -0.07
NDEL1-208ENST00000580237 KDM6AO15550 1401 aaPredicted RBP14.63□□□□□ -0.07
NDEL1-208ENST00000580237 C4BP0C0L5 1744 aa14.63□□□□□ -0.07
NDEL1-208ENST00000580237 ZNF827Q17R98 1081 aa14.62□□□□□ -0.07
NDEL1-208ENST00000580237 PIGBQ92521 554 aa14.62□□□□□ -0.07
NDEL1-208ENST00000580237 SPON1Q9HCB6 807 aa14.62□□□□□ -0.07
NDEL1-208ENST00000580237 PPP1R1BQ9UD71 204 aaPredicted RBP14.62□□□□□ -0.07
NDEL1-208ENST00000580237 NUDCQ9Y266 331 aa14.62□□□□□ -0.07
NDEL1-208ENST00000580237 HMGB2P26583 209 aaKnown RBP14.61□□□□□ -0.07
NDEL1-208ENST00000580237 DDX10Q13206 875 aaKnown RBP14.61□□□□□ -0.07
NDEL1-208ENST00000580237 TFCP2L1Q9NZI6 479 aa14.61□□□□□ -0.07
NDEL1-208ENST00000580237 ZBTB7AO95365 584 aa14.6□□□□□ -0.07
NDEL1-208ENST00000580237 CABP4P57796 275 aa14.6□□□□□ -0.07
NDEL1-208ENST00000580237 UBR3Q6ZT12 1888 aa14.59□□□□□ -0.07
NDEL1-208ENST00000580237 ERVV-2B6SEH9 535 aa14.59□□□□□ -0.07
NDEL1-208ENST00000580237 AKAP4Q5JQC9 854 aa14.59□□□□□ -0.07
NDEL1-208ENST00000580237 U2AF1L5P0DN76 240 aaPredicted RBP14.58□□□□□ -0.08
NDEL1-208ENST00000580237 U2AF1Q01081 240 aaKnown RBP eCLIP14.58□□□□□ -0.08
NDEL1-208ENST00000580237 AKT1S1Q96B36 256 aa14.58□□□□□ -0.08
NDEL1-208ENST00000580237 PDGFDQ9GZP0 370 aaPredicted RBP14.58□□□□□ -0.08
NDEL1-208ENST00000580237 ZNF831Q5JPB2 1677 aa14.58□□□□□ -0.08
NDEL1-208ENST00000580237 COL5A3P25940 1745 aaPredicted RBP14.58□□□□□ -0.08
NDEL1-208ENST00000580237 MRC1P22897 1456 aa14.57□□□□□ -0.08
NDEL1-208ENST00000580237 LOC102724428A0A0B4J2F2 783 aa14.57□□□□□ -0.08
NDEL1-208ENST00000580237 MSH5O43196 834 aa14.57□□□□□ -0.08
NDEL1-208ENST00000580237 SIK1P57059 783 aa14.57□□□□□ -0.08
NDEL1-208ENST00000580237 AK7Q96M32 723 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms