RNA–Protein interactions for RNA: ENST00000579954.1

SSH2-209, Transcript of slingshot protein phosphatase 2, humanhuman

TSL 3 BASIC

Gene SSH2, Length 428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-209ENST00000579954 AMER1Q5JTC6 1135 aaPredicted RBP12.32□□□□□ -0.44
SSH2-209ENST00000579954 ACSBG1Q96GR2 724 aa12.32□□□□□ -0.44
SSH2-209ENST00000579954 ZEB1P37275 1124 aaPredicted RBP12.31□□□□□ -0.44
SSH2-209ENST00000579954 ZCRB1Q8TBF4 217 aaKnown RBP12.31□□□□□ -0.44
SSH2-209ENST00000579954 BTAF1O14981 1849 aa12.31□□□□□ -0.44
SSH2-209ENST00000579954 RREB1Q92766 1687 aa12.31□□□□□ -0.44
SSH2-209ENST00000579954 NUP188Q5SRE5 1749 aa12.31□□□□□ -0.44
SSH2-209ENST00000579954 PKD1L3Q7Z443 1732 aa12.31□□□□□ -0.44
SSH2-209ENST00000579954 EIF4A2Q14240 407 aaKnown RBP12.3□□□□□ -0.44
SSH2-209ENST00000579954 EZH2Q15910 746 aaKnown RBP12.3□□□□□ -0.44
SSH2-209ENST00000579954 SYTL4Q96C24 671 aaPredicted RBP12.3□□□□□ -0.44
SSH2-209ENST00000579954 RGPD3A6NKT7 1758 aaPredicted RBP12.3□□□□□ -0.44
SSH2-209ENST00000579954 RGPD4Q7Z3J3 1758 aa12.3□□□□□ -0.44
SSH2-209ENST00000579954 PER1O15534 1290 aaPredicted RBP12.29□□□□□ -0.44
SSH2-209ENST00000579954 EYA1Q99502 592 aa12.29□□□□□ -0.44
SSH2-209ENST00000579954 MTHFSP49914 203 aa12.28□□□□□ -0.44
SSH2-209ENST00000579954 BCL11BQ9C0K0 894 aaPredicted RBP12.28□□□□□ -0.44
SSH2-209ENST00000579954 PCDH11XQ9BZA7 1347 aa12.28□□□□□ -0.44
SSH2-209ENST00000579954 PCDH11YQ9BZA8 1340 aa12.28□□□□□ -0.44
SSH2-209ENST00000579954 KCNQ2O43526 872 aa12.27□□□□□ -0.45
SSH2-209ENST00000579954 PTF1AQ7RTS3 328 aa12.27□□□□□ -0.45
SSH2-209ENST00000579954 ITGB4P16144 1822 aa12.26□□□□□ -0.45
SSH2-209ENST00000579954 PSDA5PKW4 1024 aaPredicted RBP12.26□□□□□ -0.45
SSH2-209ENST00000579954 SPG7Q9UQ90 795 aa12.26□□□□□ -0.45
SSH2-209ENST00000579954 PARD3Q8TEW0 1356 aa12.26□□□□□ -0.45
SSH2-209ENST00000579954 NPC1L1Q9UHC9 1359 aa12.26□□□□□ -0.45
SSH2-209ENST00000579954 BCL9O00512 1426 aa12.26□□□□□ -0.45
SSH2-209ENST00000579954 CAMKK2Q96RR4 588 aa12.25□□□□□ -0.45
SSH2-209ENST00000579954 VIRMAQ69YN4 1812 aaKnown RBP12.24□□□□□ -0.45
SSH2-209ENST00000579954 IGSF1Q8N6C5 1336 aa12.24□□□□□ -0.45
SSH2-209ENST00000579954 TOGARAM1Q9Y4F4 1720 aa12.24□□□□□ -0.45
SSH2-209ENST00000579954 NCAPD2Q15021 1401 aa12.23□□□□□ -0.45
SSH2-209ENST00000579954 DIAPH1O60610 1272 aaKnown RBP12.23□□□□□ -0.45
SSH2-209ENST00000579954 PRIM1P49642 420 aaKnown RBP12.23□□□□□ -0.45
SSH2-209ENST00000579954 DDX10Q13206 875 aaKnown RBP12.23□□□□□ -0.45
SSH2-209ENST00000579954 NBPF14Q5TI25 921 aa12.23□□□□□ -0.45
SSH2-209ENST00000579954 SULT6B1Q6IMI4 303 aa12.23□□□□□ -0.45
SSH2-209ENST00000579954 AEBP1Q8IUX7 1158 aa12.23□□□□□ -0.45
SSH2-209ENST00000579954 CFAP53Q96M91 514 aa12.23□□□□□ -0.45
SSH2-209ENST00000579954 U2SURPO15042 1029 aaKnown RBP12.22□□□□□ -0.45
SSH2-209ENST00000579954 HMOX1P09601 288 aa12.22□□□□□ -0.45
SSH2-209ENST00000579954 IL13P35225 146 aa12.22□□□□□ -0.45
SSH2-209ENST00000579954 R3HDM1Q15032 1099 aaKnown RBP12.22□□□□□ -0.45
SSH2-209ENST00000579954 PLSCR1O15162 318 aa12.21□□□□□ -0.45
SSH2-209ENST00000579954 LY75O60449 1722 aa12.2□□□□□ -0.46
SSH2-209ENST00000579954 CYP27B1O15528 508 aa12.2□□□□□ -0.46
SSH2-209ENST00000579954 TXNRD1Q16881 649 aa12.2□□□□□ -0.46
SSH2-209ENST00000579954 PLEKHO1Q53GL0 409 aaPredicted RBP12.2□□□□□ -0.46
SSH2-209ENST00000579954 C1orf141Q5JVX7 400 aa12.2□□□□□ -0.46
SSH2-209ENST00000579954 ZNF530Q6P9A1 599 aaPredicted RBP12.2□□□□□ -0.46
SSH2-209ENST00000579954 MPRIPQ6WCQ1 1025 aa12.2□□□□□ -0.46
SSH2-209ENST00000579954 IFNL2Q8IZJ0 200 aa12.2□□□□□ -0.46
SSH2-209ENST00000579954 PPP2R1AP30153 589 aa12.19□□□□□ -0.46
SSH2-209ENST00000579954 COL3A1P02461 1466 aaPredicted RBP12.19□□□□□ -0.46
SSH2-209ENST00000579954 PHKG2P15735 406 aa12.18□□□□□ -0.46
SSH2-209ENST00000579954 AMOTQ4VCS5 1084 aa12.18□□□□□ -0.46
SSH2-209ENST00000579954 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.18□□□□□ -0.46
SSH2-209ENST00000579954 SCN11AQ9UI33 1791 aa12.18□□□□□ -0.46
SSH2-209ENST00000579954 C5P01031 1676 aa12.17□□□□□ -0.46
SSH2-209ENST00000579954 STK32BQ9NY57 414 aa12.17□□□□□ -0.46
SSH2-209ENST00000579954 TMOD3Q9NYL9 352 aa12.17□□□□□ -0.46
SSH2-209ENST00000579954 NUDCQ9Y266 331 aa12.17□□□□□ -0.46
SSH2-209ENST00000579954 HSP90AB1P08238 724 aaKnown RBP12.16□□□□□ -0.46
SSH2-209ENST00000579954 KCNQ4P56696 695 aa12.16□□□□□ -0.46
SSH2-209ENST00000579954 KDRP35968 1356 aa12.16□□□□□ -0.46
SSH2-209ENST00000579954 PLEKHG2Q9H7P9 1386 aa12.16□□□□□ -0.46
SSH2-209ENST00000579954 TAF1LQ8IZX4 1826 aa12.16□□□□□ -0.46
SSH2-209ENST00000579954 PROM2Q8N271 834 aa12.15□□□□□ -0.46
SSH2-209ENST00000579954 ANO8Q9HCE9 1232 aaPredicted RBP12.15□□□□□ -0.46
SSH2-209ENST00000579954 CCNL1Q9UK58 526 aaPredicted RBP12.15□□□□□ -0.46
SSH2-209ENST00000579954 TUBGCP6Q96RT7 1819 aa12.15□□□□□ -0.46
SSH2-209ENST00000579954 PAPPAQ13219 1627 aa12.15□□□□□ -0.47
SSH2-209ENST00000579954 U2AF1L5P0DN76 240 aaPredicted RBP12.14□□□□□ -0.47
SSH2-209ENST00000579954 U2AF1Q01081 240 aaKnown RBP eCLIP12.14□□□□□ -0.47
SSH2-209ENST00000579954 LRP5O75197 1615 aa12.14□□□□□ -0.47
SSH2-209ENST00000579954 PALLDQ8WX93 1383 aa12.14□□□□□ -0.47
SSH2-209ENST00000579954 CABP4P57796 275 aa12.13□□□□□ -0.47
SSH2-209ENST00000579954 NKX1-1Q15270 411 aaPredicted RBP12.13□□□□□ -0.47
SSH2-209ENST00000579954 SLC27A3Q5K4L6 730 aa12.13□□□□□ -0.47
SSH2-209ENST00000579954 DCAF5Q96JK2 942 aa12.13□□□□□ -0.47
SSH2-209ENST00000579954 CASZ1Q86V15 1759 aa12.13□□□□□ -0.47
SSH2-209ENST00000579954 KDM6AO15550 1401 aaPredicted RBP12.12□□□□□ -0.47
SSH2-209ENST00000579954 PRKAR2BP31323 418 aa12.12□□□□□ -0.47
SSH2-209ENST00000579954 SLC15A2Q16348 729 aa12.12□□□□□ -0.47
SSH2-209ENST00000579954 AKAP4Q5JQC9 854 aa12.12□□□□□ -0.47
SSH2-209ENST00000579954 PIGBQ92521 554 aa12.12□□□□□ -0.47
SSH2-209ENST00000579954 SMARCC1Q92922 1105 aaPredicted RBP12.12□□□□□ -0.47
SSH2-209ENST00000579954 LRRC4BQ9NT99 713 aa12.12□□□□□ -0.47
SSH2-209ENST00000579954 QSER1Q2KHR3 1735 aa12.11□□□□□ -0.47
SSH2-209ENST00000579954 RALBP1Q15311 655 aa12.11□□□□□ -0.47
SSH2-209ENST00000579954 MTHFSDQ2M296 383 aaKnown RBP12.11□□□□□ -0.47
SSH2-209ENST00000579954 C4BP0C0L5 1744 aa12.11□□□□□ -0.47
SSH2-209ENST00000579954 ERVV-2B6SEH9 535 aa12.1□□□□□ -0.47
SSH2-209ENST00000579954 NEFMP07197 916 aa12.1□□□□□ -0.47
SSH2-209ENST00000579954 ZNF827Q17R98 1081 aa12.1□□□□□ -0.47
SSH2-209ENST00000579954 RBM42Q9BTD8 480 aaKnown RBP12.1□□□□□ -0.47
SSH2-209ENST00000579954 TFCP2L1Q9NZI6 479 aa12.1□□□□□ -0.47
SSH2-209ENST00000579954 ASAP1Q9ULH1 1129 aa12.1□□□□□ -0.47
SSH2-209ENST00000579954 DLG5Q8TDM6 1919 aa12.09□□□□□ -0.47
SSH2-209ENST00000579954 ZNF316A6NFI3 1004 aaPredicted RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms