RNA–Protein interactions for RNA: ENST00000579688.1

SPECC1-213, Transcript of sperm antigen with calponin homology and coiled-coil domains 1, humanhuman

TSL 4

Gene SPECC1, Length 461 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPECC1-213ENST00000579688 SLC27A3Q5K4L6 730 aa27.31■■□□□ 1.96
SPECC1-213ENST00000579688 SYT17Q9BSW7 474 aa27.31■■□□□ 1.96
SPECC1-213ENST00000579688 GGNBP2Q9H3C7 697 aa27.3■■□□□ 1.96
SPECC1-213ENST00000579688 PRIM1P49642 420 aaKnown RBP27.29■■□□□ 1.96
SPECC1-213ENST00000579688 ZCRB1Q8TBF4 217 aaKnown RBP27.29■■□□□ 1.96
SPECC1-213ENST00000579688 AKT1S1Q96B36 256 aa27.29■■□□□ 1.96
SPECC1-213ENST00000579688 SYTL4Q96C24 671 aaPredicted RBP27.29■■□□□ 1.96
SPECC1-213ENST00000579688 COL24A1Q17RW2 1714 aa27.28■■□□□ 1.96
SPECC1-213ENST00000579688 NSD2O96028 1365 aa27.28■■□□□ 1.96
SPECC1-213ENST00000579688 TRIM26Q12899 539 aaPredicted RBP27.27■■□□□ 1.96
SPECC1-213ENST00000579688 ARXQ96QS3 562 aa27.27■■□□□ 1.96
SPECC1-213ENST00000579688 SMG6Q86US8 1419 aaKnown RBP27.26■■□□□ 1.95
SPECC1-213ENST00000579688 CHD4Q14839 1912 aa27.26■■□□□ 1.95
SPECC1-213ENST00000579688 NBPF6Q5VWK0 638 aa27.26■■□□□ 1.95
SPECC1-213ENST00000579688 NBPF4Q96M43 638 aa27.26■■□□□ 1.95
SPECC1-213ENST00000579688 MAP3K5Q99683 1374 aa27.24■■□□□ 1.95
SPECC1-213ENST00000579688 CGNL1Q0VF96 1302 aa27.23■■□□□ 1.95
SPECC1-213ENST00000579688 CDCA8Q53HL2 280 aa27.23■■□□□ 1.95
SPECC1-213ENST00000579688 USHBP1Q8N6Y0 703 aa27.23■■□□□ 1.95
SPECC1-213ENST00000579688 PNPLA7Q6ZV29 1317 aa27.22■■□□□ 1.95
SPECC1-213ENST00000579688 KCNQ4P56696 695 aa27.22■■□□□ 1.95
SPECC1-213ENST00000579688 INSRP06213 1382 aa27.22■■□□□ 1.95
SPECC1-213ENST00000579688 SLC16A10Q8TF71 515 aa27.21■■□□□ 1.95
SPECC1-213ENST00000579688 FLT4P35916 1363 aa27.21■■□□□ 1.95
SPECC1-213ENST00000579688 RAPGEF4Q8WZA2 1011 aa27.2■■□□□ 1.94
SPECC1-213ENST00000579688 KIF24Q5T7B8 1368 aa27.2■■□□□ 1.94
SPECC1-213ENST00000579688 HSP90AB2PQ58FF8 381 aa27.19■■□□□ 1.94
SPECC1-213ENST00000579688 TFCP2L1Q9NZI6 479 aa27.19■■□□□ 1.94
SPECC1-213ENST00000579688 ANKRD26Q9UPS8 1709 aa27.18■■□□□ 1.94
SPECC1-213ENST00000579688 GOLGB1Q14789 3259 aaKnown RBP27.17■■□□□ 1.94
SPECC1-213ENST00000579688 C5P01031 1676 aa27.17■■□□□ 1.94
SPECC1-213ENST00000579688 NSD3Q9BZ95 1437 aa27.16■■□□□ 1.94
SPECC1-213ENST00000579688 TATP17735 454 aaPredicted RBP27.16■■□□□ 1.94
SPECC1-213ENST00000579688 CARD14Q9BXL6 1004 aa27.16■■□□□ 1.94
SPECC1-213ENST00000579688 CCNL1Q9UK58 526 aaPredicted RBP27.16■■□□□ 1.94
SPECC1-213ENST00000579688 PKD1L3Q7Z443 1732 aa27.16■■□□□ 1.94
SPECC1-213ENST00000579688 ITGB4P16144 1822 aa27.15■■□□□ 1.94
SPECC1-213ENST00000579688 TAF1LQ8IZX4 1826 aa27.14■■□□□ 1.94
SPECC1-213ENST00000579688 TOGARAM1Q9Y4F4 1720 aa27.14■■□□□ 1.94
SPECC1-213ENST00000579688 POLD1P28340 1107 aa27.14■■□□□ 1.94
SPECC1-213ENST00000579688 PCDH11XQ9BZA7 1347 aa27.14■■□□□ 1.93
SPECC1-213ENST00000579688 PCDH11YQ9BZA8 1340 aa27.14■■□□□ 1.93
SPECC1-213ENST00000579688 MAP2P11137 1827 aaKnown RBP27.13■■□□□ 1.93
SPECC1-213ENST00000579688 ZNF784Q8NCA9 323 aaPredicted RBP27.11■■□□□ 1.93
SPECC1-213ENST00000579688 EMILIN1Q9Y6C2 1016 aa27.11■■□□□ 1.93
SPECC1-213ENST00000579688 KLHL34Q8N239 644 aa27.1■■□□□ 1.93
SPECC1-213ENST00000579688 NCAPD2Q15021 1401 aa27.09■■□□□ 1.93
SPECC1-213ENST00000579688 TIMELESSQ9UNS1 1208 aa27.08■■□□□ 1.93
SPECC1-213ENST00000579688 CYP27B1O15528 508 aa27.07■■□□□ 1.92
SPECC1-213ENST00000579688 COL23A1Q86Y22 540 aaPredicted RBP27.06■■□□□ 1.92
SPECC1-213ENST00000579688 PALLDQ8WX93 1383 aa27.06■■□□□ 1.92
SPECC1-213ENST00000579688 GPR162Q16538 588 aa27.05■■□□□ 1.92
SPECC1-213ENST00000579688 MSH5O43196 834 aa27.04■■□□□ 1.92
SPECC1-213ENST00000579688 MPRIPQ6WCQ1 1025 aa27.04■■□□□ 1.92
SPECC1-213ENST00000579688 PPM1GO15355 546 aaPredicted RBP27.03■■□□□ 1.92
SPECC1-213ENST00000579688 C4BP0C0L5 1744 aa27.02■■□□□ 1.92
SPECC1-213ENST00000579688 NLGN2Q8NFZ4 835 aa27.02■■□□□ 1.92
SPECC1-213ENST00000579688 WASHC2AQ641Q2 1341 aa27.01■■□□□ 1.91
SPECC1-213ENST00000579688 CLSPNQ9HAW4 1339 aa27■■□□□ 1.91
SPECC1-213ENST00000579688 UBR3Q6ZT12 1888 aa27■■□□□ 1.91
SPECC1-213ENST00000579688 HMGB2P26583 209 aaKnown RBP26.98■■□□□ 1.91
SPECC1-213ENST00000579688 MSL1Q68DK7 614 aa26.98■■□□□ 1.91
SPECC1-213ENST00000579688 PELP1Q8IZL8 1130 aaKnown RBP26.98■■□□□ 1.91
SPECC1-213ENST00000579688 NKX1-1Q15270 411 aaPredicted RBP26.97■■□□□ 1.91
SPECC1-213ENST00000579688 SMARCC1Q92922 1105 aaPredicted RBP26.97■■□□□ 1.91
SPECC1-213ENST00000579688 EYA1Q99502 592 aa26.97■■□□□ 1.91
SPECC1-213ENST00000579688 SPG7Q9UQ90 795 aa26.97■■□□□ 1.91
SPECC1-213ENST00000579688 FLAD1Q8NFF5 587 aa26.96■■□□□ 1.91
SPECC1-213ENST00000579688 PIGBQ92521 554 aa26.96■■□□□ 1.91
SPECC1-213ENST00000579688 POLKQ9UBT6 870 aa26.96■■□□□ 1.91
SPECC1-213ENST00000579688 POLR3GLQ9BT43 218 aa26.93■■□□□ 1.9
SPECC1-213ENST00000579688 PCGF6Q9BYE7 350 aa26.93■■□□□ 1.9
SPECC1-213ENST00000579688 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.93■■□□□ 1.9
SPECC1-213ENST00000579688 AK7Q96M32 723 aa26.92■■□□□ 1.9
SPECC1-213ENST00000579688 YBX3P16989 372 aaKnown RBP eCLIP26.9■■□□□ 1.9
SPECC1-213ENST00000579688 AMIGO3Q86WK7 504 aa26.9■■□□□ 1.9
SPECC1-213ENST00000579688 TNNT2P45379 298 aaPredicted RBP26.89■■□□□ 1.9
SPECC1-213ENST00000579688 LOC102724428A0A0B4J2F2 783 aa26.88■■□□□ 1.89
SPECC1-213ENST00000579688 PHKG2P15735 406 aa26.88■■□□□ 1.89
SPECC1-213ENST00000579688 SIK1P57059 783 aa26.88■■□□□ 1.89
SPECC1-213ENST00000579688 EIF4A2Q14240 407 aaKnown RBP26.88■■□□□ 1.89
SPECC1-213ENST00000579688 TMOD3Q9NYL9 352 aa26.88■■□□□ 1.89
SPECC1-213ENST00000579688 IFNL2Q8IZJ0 200 aa26.87■■□□□ 1.89
SPECC1-213ENST00000579688 CD2APQ9Y5K6 639 aa26.87■■□□□ 1.89
SPECC1-213ENST00000579688 PLEKHG2Q9H7P9 1386 aa26.86■■□□□ 1.89
SPECC1-213ENST00000579688 GRIN3BO60391 1043 aa26.86■■□□□ 1.89
SPECC1-213ENST00000579688 PHF14O94880 888 aa26.86■■□□□ 1.89
SPECC1-213ENST00000579688 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.85■■□□□ 1.89
SPECC1-213ENST00000579688 SMIM5Q71RC9 77 aa26.85■■□□□ 1.89
SPECC1-213ENST00000579688 LINC00116Q8NCU8 138 aa26.85■■□□□ 1.89
SPECC1-213ENST00000579688 ASAP1Q9ULH1 1129 aa26.85■■□□□ 1.89
SPECC1-213ENST00000579688 C1QTNF8P60827 252 aa26.84■■□□□ 1.89
SPECC1-213ENST00000579688 EIF4G2P78344 907 aaKnown RBP eCLIP26.84■■□□□ 1.89
SPECC1-213ENST00000579688 HSPA5P11021 654 aaKnown RBP26.83■■□□□ 1.89
SPECC1-213ENST00000579688 SSFA2P28290 1259 aa26.83■■□□□ 1.89
SPECC1-213ENST00000579688 IGSF1Q8N6C5 1336 aa26.83■■□□□ 1.89
SPECC1-213ENST00000579688 ITPK1Q13572 414 aa26.81■■□□□ 1.88
SPECC1-213ENST00000579688 PANK3Q9H999 370 aa26.81■■□□□ 1.88
SPECC1-213ENST00000579688 ZNF831Q5JPB2 1677 aa26.81■■□□□ 1.88
SPECC1-213ENST00000579688 ATG3Q9NT62 314 aa26.8■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms