RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 QSER1Q2KHR3 1735 aa12.06□□□□□ -0.48
CASC3-206ENST00000579238 NSD2O96028 1365 aa12.05□□□□□ -0.48
CASC3-206ENST00000579238 ST20-MTHFSA0A0A6YYL1 179 aa12.04□□□□□ -0.48
CASC3-206ENST00000579238 FBLN1P23142 703 aa12.04□□□□□ -0.48
CASC3-206ENST00000579238 KCNQ4P56696 695 aa12.04□□□□□ -0.48
CASC3-206ENST00000579238 RTL1A6NKG5 1358 aa12.04□□□□□ -0.48
CASC3-206ENST00000579238 MEGF6O75095 1541 aa12.03□□□□□ -0.48
CASC3-206ENST00000579238 KLHL34Q8N239 644 aa12.03□□□□□ -0.48
CASC3-206ENST00000579238 CGNL1Q0VF96 1302 aa12.03□□□□□ -0.48
CASC3-206ENST00000579238 COL24A1Q17RW2 1714 aa12.03□□□□□ -0.48
CASC3-206ENST00000579238 C1QTNF8P60827 252 aa12.02□□□□□ -0.49
CASC3-206ENST00000579238 CCNL1Q9UK58 526 aaPredicted RBP12.02□□□□□ -0.49
CASC3-206ENST00000579238 LY75O60449 1722 aa12.02□□□□□ -0.49
CASC3-206ENST00000579238 DOT1LQ8TEK3 1739 aa12.02□□□□□ -0.49
CASC3-206ENST00000579238 USP47Q96K76 1375 aa12.02□□□□□ -0.49
CASC3-206ENST00000579238 SHANK3Q9BYB0 1731 aa12.01□□□□□ -0.49
CASC3-206ENST00000579238 RRS1Q15050 365 aaKnown RBP12.01□□□□□ -0.49
CASC3-206ENST00000579238 NBPF6Q5VWK0 638 aa12.01□□□□□ -0.49
CASC3-206ENST00000579238 NBPF4Q96M43 638 aa12.01□□□□□ -0.49
CASC3-206ENST00000579238 TUBGCP6Q96RT7 1819 aa12□□□□□ -0.49
CASC3-206ENST00000579238 SENP3-EIF4A1A0A087X0R7 540 aa12□□□□□ -0.49
CASC3-206ENST00000579238 FYB1O15117 783 aa12□□□□□ -0.49
CASC3-206ENST00000579238 HMGB2P26583 209 aaKnown RBP12□□□□□ -0.49
CASC3-206ENST00000579238 PELP1Q8IZL8 1130 aaKnown RBP12□□□□□ -0.49
CASC3-206ENST00000579238 NLGN2Q8NFZ4 835 aa12□□□□□ -0.49
CASC3-206ENST00000579238 RAPGEF4Q8WZA2 1011 aa12□□□□□ -0.49
CASC3-206ENST00000579238 SMG6Q86US8 1419 aaKnown RBP12□□□□□ -0.49
CASC3-206ENST00000579238 RGPD2P0DJD1 1756 aa12□□□□□ -0.49
CASC3-206ENST00000579238 TMF1P82094 1093 aa11.99□□□□□ -0.49
CASC3-206ENST00000579238 COL23A1Q86Y22 540 aaPredicted RBP11.99□□□□□ -0.49
CASC3-206ENST00000579238 USHBP1Q8N6Y0 703 aa11.99□□□□□ -0.49
CASC3-206ENST00000579238 GGNBP2Q9H3C7 697 aa11.99□□□□□ -0.49
CASC3-206ENST00000579238 GOLGB1Q14789 3259 aaKnown RBP11.98□□□□□ -0.49
CASC3-206ENST00000579238 INSRP06213 1382 aa11.98□□□□□ -0.49
CASC3-206ENST00000579238 MSH5O43196 834 aa11.98□□□□□ -0.49
CASC3-206ENST00000579238 GRIN3BO60391 1043 aa11.98□□□□□ -0.49
CASC3-206ENST00000579238 TATP17735 454 aaPredicted RBP11.98□□□□□ -0.49
CASC3-206ENST00000579238 KIF24Q5T7B8 1368 aa11.97□□□□□ -0.49
CASC3-206ENST00000579238 PCDH11XQ9BZA7 1347 aa11.97□□□□□ -0.49
CASC3-206ENST00000579238 PCDH11YQ9BZA8 1340 aa11.97□□□□□ -0.49
CASC3-206ENST00000579238 GIGYF1O75420 1035 aaPredicted RBP11.97□□□□□ -0.49
CASC3-206ENST00000579238 FLT4P35916 1363 aa11.96□□□□□ -0.49
CASC3-206ENST00000579238 YBX3P16989 372 aaKnown RBP eCLIP11.96□□□□□ -0.49
CASC3-206ENST00000579238 HSP90AB2PQ58FF8 381 aa11.96□□□□□ -0.49
CASC3-206ENST00000579238 FLAD1Q8NFF5 587 aa11.96□□□□□ -0.49
CASC3-206ENST00000579238 PALLDQ8WX93 1383 aa11.95□□□□□ -0.5
CASC3-206ENST00000579238 CDCA8Q53HL2 280 aa11.95□□□□□ -0.5
CASC3-206ENST00000579238 MSL1Q68DK7 614 aa11.95□□□□□ -0.5
CASC3-206ENST00000579238 CYP27B1O15528 508 aa11.94□□□□□ -0.5
CASC3-206ENST00000579238 MPRIPQ6WCQ1 1025 aa11.94□□□□□ -0.5
CASC3-206ENST00000579238 SMARCC1Q92922 1105 aaPredicted RBP11.94□□□□□ -0.5
CASC3-206ENST00000579238 CD2APQ9Y5K6 639 aa11.94□□□□□ -0.5
CASC3-206ENST00000579238 C5P01031 1676 aa11.93□□□□□ -0.5
CASC3-206ENST00000579238 AK7Q96M32 723 aa11.92□□□□□ -0.5
CASC3-206ENST00000579238 KIF20BQ96Q89 1820 aa11.91□□□□□ -0.5
CASC3-206ENST00000579238 NKX1-1Q15270 411 aaPredicted RBP11.91□□□□□ -0.5
CASC3-206ENST00000579238 CARD14Q9BXL6 1004 aa11.91□□□□□ -0.5
CASC3-206ENST00000579238 EMILIN1Q9Y6C2 1016 aa11.91□□□□□ -0.5
CASC3-206ENST00000579238 NCAPD2Q15021 1401 aa11.91□□□□□ -0.5
CASC3-206ENST00000579238 TAF1LQ8IZX4 1826 aa11.9□□□□□ -0.5
CASC3-206ENST00000579238 PIGBQ92521 554 aa11.9□□□□□ -0.5
CASC3-206ENST00000579238 NSD3Q9BZ95 1437 aa11.9□□□□□ -0.5
CASC3-206ENST00000579238 SPG7Q9UQ90 795 aa11.9□□□□□ -0.5
CASC3-206ENST00000579238 C4BP0C0L5 1744 aa11.89□□□□□ -0.51
CASC3-206ENST00000579238 PKD1L3Q7Z443 1732 aa11.89□□□□□ -0.51
CASC3-206ENST00000579238 TOGARAM1Q9Y4F4 1720 aa11.89□□□□□ -0.51
CASC3-206ENST00000579238 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.89□□□□□ -0.51
CASC3-206ENST00000579238 AMIGO3Q86WK7 504 aa11.89□□□□□ -0.51
CASC3-206ENST00000579238 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.89□□□□□ -0.51
CASC3-206ENST00000579238 WASHC2AQ641Q2 1341 aa11.88□□□□□ -0.51
CASC3-206ENST00000579238 ATP10DQ9P241 1426 aa11.88□□□□□ -0.51
CASC3-206ENST00000579238 LOC102724428A0A0B4J2F2 783 aa11.88□□□□□ -0.51
CASC3-206ENST00000579238 PPM1GO15355 546 aaPredicted RBP11.88□□□□□ -0.51
CASC3-206ENST00000579238 PHF14O94880 888 aa11.88□□□□□ -0.51
CASC3-206ENST00000579238 SSFA2P28290 1259 aa11.88□□□□□ -0.51
CASC3-206ENST00000579238 SIK1P57059 783 aa11.88□□□□□ -0.51
CASC3-206ENST00000579238 ITGB4P16144 1822 aa11.88□□□□□ -0.51
CASC3-206ENST00000579238 LINC00116Q8NCU8 138 aa11.87□□□□□ -0.51
CASC3-206ENST00000579238 EYA1Q99502 592 aa11.87□□□□□ -0.51
CASC3-206ENST00000579238 TMOD3Q9NYL9 352 aa11.87□□□□□ -0.51
CASC3-206ENST00000579238 IGSF1Q8N6C5 1336 aa11.86□□□□□ -0.51
CASC3-206ENST00000579238 SMIM5Q71RC9 77 aa11.86□□□□□ -0.51
CASC3-206ENST00000579238 IFNL2Q8IZJ0 200 aa11.86□□□□□ -0.51
CASC3-206ENST00000579238 GPBP1L1Q9HC44 474 aaPredicted RBP11.86□□□□□ -0.51
CASC3-206ENST00000579238 ADCY9O60503 1353 aa11.86□□□□□ -0.51
CASC3-206ENST00000579238 UBR3Q6ZT12 1888 aa11.86□□□□□ -0.51
CASC3-206ENST00000579238 MAP2P11137 1827 aaKnown RBP11.86□□□□□ -0.51
CASC3-206ENST00000579238 PHKG2P15735 406 aa11.85□□□□□ -0.51
CASC3-206ENST00000579238 POLKQ9UBT6 870 aa11.85□□□□□ -0.51
CASC3-206ENST00000579238 ASAP1Q9ULH1 1129 aa11.85□□□□□ -0.51
CASC3-206ENST00000579238 ANKRD26Q9UPS8 1709 aa11.85□□□□□ -0.51
CASC3-206ENST00000579238 GNPATO15228 680 aa11.84□□□□□ -0.51
CASC3-206ENST00000579238 ATP6V1AP38606 617 aa11.84□□□□□ -0.51
CASC3-206ENST00000579238 ITPK1Q13572 414 aa11.84□□□□□ -0.51
CASC3-206ENST00000579238 PLEKHG2Q9H7P9 1386 aa11.83□□□□□ -0.52
CASC3-206ENST00000579238 ATG3Q9NT62 314 aa11.83□□□□□ -0.52
CASC3-206ENST00000579238 EIF4A2Q14240 407 aaKnown RBP11.82□□□□□ -0.52
CASC3-206ENST00000579238 ZNF526Q8TF50 670 aaPredicted RBP11.82□□□□□ -0.52
CASC3-206ENST00000579238 WWC3Q9ULE0 1092 aa11.82□□□□□ -0.52
CASC3-206ENST00000579238 TIMELESSQ9UNS1 1208 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms