RNA–Protein interactions for RNA: ENST00000578993.5

LIMD2-206, Transcript of LIM domain containing 2, humanhuman

TSL 3 BASIC

Gene LIMD2, Length 602 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-206ENST00000578993 TXNRD1Q16881 649 aa28.13■■■□□ 2.09
LIMD2-206ENST00000578993 DDX54Q8TDD1 881 aaKnown RBP28.13■■■□□ 2.09
LIMD2-206ENST00000578993 CGNL1Q0VF96 1302 aa28.12■■■□□ 2.09
LIMD2-206ENST00000578993 SMG6Q86US8 1419 aaKnown RBP28.1■■■□□ 2.09
LIMD2-206ENST00000578993 PAPPAQ13219 1627 aa28.09■■■□□ 2.09
LIMD2-206ENST00000578993 ZCRB1Q8TBF4 217 aaKnown RBP28.08■■■□□ 2.09
LIMD2-206ENST00000578993 PDGFDQ9GZP0 370 aaPredicted RBP28.07■■■□□ 2.08
LIMD2-206ENST00000578993 PANK3Q9H999 370 aa28.07■■■□□ 2.08
LIMD2-206ENST00000578993 NCAPD2Q15021 1401 aa28.05■■■□□ 2.08
LIMD2-206ENST00000578993 POLKQ9UBT6 870 aa28.04■■■□□ 2.08
LIMD2-206ENST00000578993 PKD1L3Q7Z443 1732 aa28.04■■■□□ 2.08
LIMD2-206ENST00000578993 NSD2O96028 1365 aa28.03■■■□□ 2.08
LIMD2-206ENST00000578993 PPM1GO15355 546 aaPredicted RBP28.03■■■□□ 2.08
LIMD2-206ENST00000578993 LY75O60449 1722 aa28.03■■■□□ 2.08
LIMD2-206ENST00000578993 WASHC2AQ641Q2 1341 aa28.02■■■□□ 2.08
LIMD2-206ENST00000578993 PRIM1P49642 420 aaKnown RBP28.01■■■□□ 2.07
LIMD2-206ENST00000578993 RAPGEF4Q8WZA2 1011 aa28.01■■■□□ 2.07
LIMD2-206ENST00000578993 SLC15A2Q16348 729 aa28■■■□□ 2.07
LIMD2-206ENST00000578993 LRRC4BQ9NT99 713 aa28■■■□□ 2.07
LIMD2-206ENST00000578993 TATP17735 454 aaPredicted RBP27.99■■■□□ 2.07
LIMD2-206ENST00000578993 TNNT2P45379 298 aaPredicted RBP27.99■■■□□ 2.07
LIMD2-206ENST00000578993 TOGARAM1Q9Y4F4 1720 aa27.98■■■□□ 2.07
LIMD2-206ENST00000578993 STK32BQ9NY57 414 aa27.98■■■□□ 2.07
LIMD2-206ENST00000578993 SPON1Q9HCB6 807 aa27.97■■■□□ 2.07
LIMD2-206ENST00000578993 SYTL4Q96C24 671 aaPredicted RBP27.96■■■□□ 2.07
LIMD2-206ENST00000578993 ITGB4P16144 1822 aa27.96■■■□□ 2.07
LIMD2-206ENST00000578993 TUBGCP6Q96RT7 1819 aa27.95■■■□□ 2.07
LIMD2-206ENST00000578993 EYA1Q99502 592 aa27.95■■■□□ 2.06
LIMD2-206ENST00000578993 KIF7Q2M1P5 1343 aa27.94■■■□□ 2.06
LIMD2-206ENST00000578993 CYP27B1O15528 508 aa27.94■■■□□ 2.06
LIMD2-206ENST00000578993 ZNF827Q17R98 1081 aa27.94■■■□□ 2.06
LIMD2-206ENST00000578993 PCDH11XQ9BZA7 1347 aa27.93■■■□□ 2.06
LIMD2-206ENST00000578993 PCDH11YQ9BZA8 1340 aa27.93■■■□□ 2.06
LIMD2-206ENST00000578993 QSER1Q2KHR3 1735 aa27.92■■■□□ 2.06
LIMD2-206ENST00000578993 ZBTB7AO95365 584 aa27.92■■■□□ 2.06
LIMD2-206ENST00000578993 KCNQ4P56696 695 aa27.91■■■□□ 2.06
LIMD2-206ENST00000578993 EIF4A2Q14240 407 aaKnown RBP27.91■■■□□ 2.06
LIMD2-206ENST00000578993 PTGER2P43116 358 aa27.88■■■□□ 2.05
LIMD2-206ENST00000578993 SLC27A3Q5K4L6 730 aa27.88■■■□□ 2.05
LIMD2-206ENST00000578993 AKT1S1Q96B36 256 aa27.88■■■□□ 2.05
LIMD2-206ENST00000578993 ATF5Q9Y2D1 282 aaPredicted RBP27.86■■■□□ 2.05
LIMD2-206ENST00000578993 AMER1Q5JTC6 1135 aaPredicted RBP27.85■■■□□ 2.05
LIMD2-206ENST00000578993 MORC1Q86VD1 984 aa27.85■■■□□ 2.05
LIMD2-206ENST00000578993 TAF1LQ8IZX4 1826 aa27.85■■■□□ 2.05
LIMD2-206ENST00000578993 PPP1R1BQ9UD71 204 aaPredicted RBP27.84■■■□□ 2.05
LIMD2-206ENST00000578993 KNSTRNQ9Y448 316 aa27.84■■■□□ 2.05
LIMD2-206ENST00000578993 NKX1-1Q15270 411 aaPredicted RBP27.83■■■□□ 2.05
LIMD2-206ENST00000578993 SGIP1Q9BQI5 828 aa27.83■■■□□ 2.05
LIMD2-206ENST00000578993 IGSF1Q8N6C5 1336 aa27.83■■■□□ 2.05
LIMD2-206ENST00000578993 C5P01031 1676 aa27.82■■■□□ 2.04
LIMD2-206ENST00000578993 COL24A1Q17RW2 1714 aa27.81■■■□□ 2.04
LIMD2-206ENST00000578993 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.81■■■□□ 2.04
LIMD2-206ENST00000578993 SPG7Q9UQ90 795 aa27.81■■■□□ 2.04
LIMD2-206ENST00000578993 PER1O15534 1290 aaPredicted RBP27.8■■■□□ 2.04
LIMD2-206ENST00000578993 MTFR1LQ9H019 292 aa27.8■■■□□ 2.04
LIMD2-206ENST00000578993 CCNL1Q9UK58 526 aaPredicted RBP27.8■■■□□ 2.04
LIMD2-206ENST00000578993 MPRIPQ6WCQ1 1025 aa27.79■■■□□ 2.04
LIMD2-206ENST00000578993 PNPLA7Q6ZV29 1317 aa27.78■■■□□ 2.04
LIMD2-206ENST00000578993 PHKG2P15735 406 aa27.76■■■□□ 2.03
LIMD2-206ENST00000578993 PALLDQ8WX93 1383 aa27.75■■■□□ 2.03
LIMD2-206ENST00000578993 PIGBQ92521 554 aa27.75■■■□□ 2.03
LIMD2-206ENST00000578993 PLEKHG2Q9H7P9 1386 aa27.74■■■□□ 2.03
LIMD2-206ENST00000578993 TFCP2L1Q9NZI6 479 aa27.74■■■□□ 2.03
LIMD2-206ENST00000578993 AEBP1Q8IUX7 1158 aa27.73■■■□□ 2.03
LIMD2-206ENST00000578993 IFNL2Q8IZJ0 200 aa27.73■■■□□ 2.03
LIMD2-206ENST00000578993 C4BP0C0L5 1744 aa27.71■■■□□ 2.03
LIMD2-206ENST00000578993 IL13P35225 146 aa27.7■■■□□ 2.02
LIMD2-206ENST00000578993 FHDC1Q9C0D6 1143 aaPredicted RBP27.69■■■□□ 2.02
LIMD2-206ENST00000578993 UBR3Q6ZT12 1888 aa27.68■■■□□ 2.02
LIMD2-206ENST00000578993 SLC16A10Q8TF71 515 aa27.68■■■□□ 2.02
LIMD2-206ENST00000578993 CC2D1BQ5T0F9 858 aaKnown RBP27.67■■■□□ 2.02
LIMD2-206ENST00000578993 SMARCC1Q92922 1105 aaPredicted RBP27.67■■■□□ 2.02
LIMD2-206ENST00000578993 KDRP35968 1356 aa27.67■■■□□ 2.02
LIMD2-206ENST00000578993 MTHFSP49914 203 aa27.66■■■□□ 2.02
LIMD2-206ENST00000578993 COL23A1Q86Y22 540 aaPredicted RBP27.66■■■□□ 2.02
LIMD2-206ENST00000578993 ARXQ96QS3 562 aa27.66■■■□□ 2.02
LIMD2-206ENST00000578993 SYT17Q9BSW7 474 aa27.66■■■□□ 2.02
LIMD2-206ENST00000578993 TMOD3Q9NYL9 352 aa27.66■■■□□ 2.02
LIMD2-206ENST00000578993 ASAP1Q9ULH1 1129 aa27.66■■■□□ 2.02
LIMD2-206ENST00000578993 KDM6AO15550 1401 aaPredicted RBP27.66■■■□□ 2.02
LIMD2-206ENST00000578993 SULT6B1Q6IMI4 303 aa27.65■■■□□ 2.02
LIMD2-206ENST00000578993 PLEKHO1Q53GL0 409 aaPredicted RBP27.64■■■□□ 2.02
LIMD2-206ENST00000578993 AMIGO3Q86WK7 504 aa27.63■■■□□ 2.01
LIMD2-206ENST00000578993 VIRMAQ69YN4 1812 aaKnown RBP27.62■■■□□ 2.01
LIMD2-206ENST00000578993 NPC1L1Q9UHC9 1359 aa27.62■■■□□ 2.01
LIMD2-206ENST00000578993 ZNF530Q6P9A1 599 aaPredicted RBP27.62■■■□□ 2.01
LIMD2-206ENST00000578993 ATG3Q9NT62 314 aa27.62■■■□□ 2.01
LIMD2-206ENST00000578993 SCN11AQ9UI33 1791 aa27.61■■■□□ 2.01
LIMD2-206ENST00000578993 UTRNP46939 3433 aa27.61■■■□□ 2.01
LIMD2-206ENST00000578993 LOC102724428A0A0B4J2F2 783 aa27.61■■■□□ 2.01
LIMD2-206ENST00000578993 SIK1P57059 783 aa27.61■■■□□ 2.01
LIMD2-206ENST00000578993 AMOTQ4VCS5 1084 aa27.6■■■□□ 2.01
LIMD2-206ENST00000578993 DCAF5Q96JK2 942 aa27.6■■■□□ 2.01
LIMD2-206ENST00000578993 MAP3K5Q99683 1374 aa27.6■■■□□ 2.01
LIMD2-206ENST00000578993 ERVV-2B6SEH9 535 aa27.59■■■□□ 2.01
LIMD2-206ENST00000578993 LINC00116Q8NCU8 138 aa27.59■■■□□ 2.01
LIMD2-206ENST00000578993 ZNF831Q5JPB2 1677 aa27.59■■■□□ 2.01
LIMD2-206ENST00000578993 COL3A1P02461 1466 aaPredicted RBP27.58■■■□□ 2.01
LIMD2-206ENST00000578993 ITPK1Q13572 414 aa27.58■■■□□ 2.01
LIMD2-206ENST00000578993 SMIM5Q71RC9 77 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms